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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GAPDH is not prognostic in Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: 1.96
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
0.47
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
74%
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
58%
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5711.7
Number of samples
283
Samples
Sample
Description
TPM
TCGA-DG-A2KJ-01A
50 years, female, stage:Stage IIIB, alive, 2893 days
82920.5
TCGA-ZJ-AAXU-01A
51 years, female, white, stage:Stage IIB, alive, 5 days
70560.3
TCGA-C5-A2LV-01A
36 years, female, black or african american, stage:Stage IB, alive, 2234 days
43991.8
TCGA-C5-A7CL-01A
48 years, female, white, stage:Stage IIIB, dead, 471 days
31032.0
TCGA-C5-A0TN-01A
21 years, female, black or african american, stage:Stage IB, dead, 348 days
30054.8
TCGA-DS-A7WI-01A
43 years, female, white, stage:Stage IIA, dead, 252 days
29707.8
TCGA-C5-A7X5-01A
72 years, female, black or african american, stage:Stage IVB, dead, 414 days
28747.0
TCGA-C5-A2LX-01A
54 years, female, white, stage:Stage IB, alive, 2526 days
27513.7
TCGA-LP-A7HU-01A
53 years, female, asian, stage:Stage II, alive, 406 days
26935.0
TCGA-MA-AA3W-01A
54 years, female, white, stage:Stage IB, alive, 685 days
22706.7
TCGA-EK-A2IP-01A
28 years, female, white, stage:Stage IB, alive, 202 days
22391.0
TCGA-VS-A8QA-01A
44 years, female, stage:Stage IB, alive, 1099 days
20158.4
TCGA-VS-A9U5-01A
57 years, female, white, stage:Stage IIB, alive, 1535 days
16874.2
TCGA-C5-A3HE-01A
44 years, female, white, stage:Stage IB, alive, 548 days
16233.4
TCGA-VS-A8EJ-01A
60 years, female, white, stage:Stage IIB, dead, 607 days
16050.9
TCGA-GH-A9DA-01A
27 years, female, white, stage:Stage IB, alive, 540 days
15805.2
TCGA-VS-A9UP-01A
43 years, female, stage:Stage IIA, alive, 1444 days
15739.1
TCGA-EA-A3HQ-01A
60 years, female, white, stage:Stage II, alive, 1136 days
15449.7
TCGA-JW-A5VH-01A
53 years, female, american indian or alaska native, stage:Stage IVB, dead, 100 days
15339.7
TCGA-EA-A1QS-01A
46 years, female, white, stage:Stage IB, alive, 1203 days
15143.8
TCGA-JW-AAVH-01A
46 years, female, white, stage:Stage IB, alive, 552 days
14910.5
TCGA-EA-A556-01A
38 years, female, white, stage:Stage IB, alive, 453 days
14442.7
TCGA-VS-A954-01A
67 years, female, stage:Stage IIIB, alive, 1714 days
13781.8
TCGA-VS-A957-01A
64 years, female, white, stage:Stage IB, alive, 1688 days
13149.8
TCGA-LP-A4AW-01A
52 years, female, asian, stage:Stage IA, alive, 27 days
13063.3
TCGA-C5-A1ML-01A
49 years, female, white, stage:Stage IB, dead, 636 days
12775.3
TCGA-VS-A9UU-01A
42 years, female, stage:Stage IIB, alive, 442 days
12725.3
TCGA-JW-A5VK-01A
43 years, female, black or african american, stage:Stage IB, alive, 623 days
12521.9
TCGA-EK-A2PI-01A
44 years, female, white, stage:Stage IIIB, alive, 586 days
12005.8
TCGA-C5-A2LZ-01A
65 years, female, white, stage:Stage IIIB, dead, 3046 days
11855.8
TCGA-VS-A94X-01A
40 years, female, black or african american, stage:Stage IIB, dead, 506 days
9961.0
TCGA-IR-A3LH-01A
49 years, female, black or african american, stage:Stage IIA, alive, 2394 days
9850.9
TCGA-VS-A8EH-01A
56 years, female, stage:Stage IIIB, alive, 986 days
9654.0
TCGA-VS-A8EI-01A
38 years, female, white, stage:Stage IIB, alive, 729 days
9519.8
TCGA-VS-A94W-01A
39 years, female, white, stage:Stage IIB, alive, 1243 days
9360.2
TCGA-C5-A1MF-01A
49 years, female, white, stage:Stage IB, alive, 1617 days
8520.8
TCGA-VS-A953-01A
63 years, female, stage:Stage IVA, dead, 477 days
8520.3
TCGA-EK-A2R8-01A
48 years, female, white, stage:Stage IB, alive, 44 days
8460.5
TCGA-HM-A3JK-01A
64 years, female, white, stage:Stage IIA, alive, 632 days
8214.3
TCGA-C5-A901-01A
44 years, female, white, stage:'--, alive, 518 days
8022.4
TCGA-VS-A8EC-01A
55 years, female, white, stage:Stage IIIB, alive, 1415 days
7878.8
TCGA-DS-A1OD-01A
49 years, female, white, stage:Stage IB, alive, 3874 days
7719.1
TCGA-C5-A1BJ-01A
34 years, female, white, stage:Stage IIB, alive, 4385 days
7657.7
TCGA-EA-A78R-01A
54 years, female, asian, stage:Stage IB, alive, 410 days
7292.3
TCGA-EA-A5ZF-01A
56 years, female, asian, stage:Stage IB, alive, 828 days
7148.8
TCGA-C5-A7CK-01A
58 years, female, white, stage:Stage IVA, dead, 4086 days
7087.9
TCGA-EX-A3L1-01A
32 years, female, white, stage:Stage IIA, alive, 463 days
6999.2
TCGA-IR-A3LI-01A
48 years, female, white, stage:Stage IVB, alive, 2493 days
6965.5
TCGA-DG-A2KK-01A
51 years, female, stage:Stage IIIB, alive, 2496 days
6853.3
TCGA-IR-A3L7-01A
37 years, female, white, stage:Stage IB, alive, 4483 days
6738.6
TCGA-DS-A0VN-01A
47 years, female, white, stage:Stage IB, alive, 3609 days
6738.3
TCGA-EX-A69M-01A
62 years, female, white, stage:Stage IB, dead, 253 days
6726.1
TCGA-VS-A8EB-01A
41 years, female, white, stage:Stage IIIB, dead, 305 days
6716.9
TCGA-EA-A5FO-01A
59 years, female, white, stage:Stage IB, alive, 815 days
6633.1
TCGA-MY-A5BF-01A
68 years, female, white, stage:Stage IIA, alive, 634 days
6399.5
TCGA-C5-A1M6-01A
55 years, female, white, stage:Stage IIB, dead, 955 days
6378.9
TCGA-EA-A3Y4-01A
40 years, female, white, stage:Stage IB, alive, 1122 days
6313.3
TCGA-DS-A7WH-01A
34 years, female, white, stage:Stage IB, alive, 533 days
6258.6
TCGA-C5-A1M9-01A
46 years, female, white, stage:Stage IB, dead, 1065 days
6170.1
TCGA-EK-A2H0-01A
24 years, female, white, stage:Stage IIB, alive, 1847 days
6143.8
TCGA-EX-A1H5-01A
58 years, female, black or african american, stage:Stage IIB, alive, 619 days
6115.3
TCGA-EK-A2H1-01A
20 years, female, white, stage:Stage IB, alive, 799 days
6046.6
TCGA-VS-A9UJ-01A
55 years, female, stage:Stage IIB, dead, 52 days
6030.8
TCGA-Q1-A73S-01A
33 years, female, white, stage:Stage IB, alive, 688 days
5966.0
TCGA-VS-A9UH-01A
53 years, female, black or african american, stage:Stage IVA, alive, 1427 days
5889.9
TCGA-FU-A3WB-01A
43 years, female, white, stage:Stage IIA, alive, 491 days
5829.1
TCGA-VS-A94Y-01A
47 years, female, white, stage:Stage IIB, dead, 144 days
5692.7
TCGA-C5-A8ZZ-01A
41 years, female, white, stage:Stage IIB, alive, 636 days
5518.6
TCGA-ZJ-A8QQ-01A
24 years, female, white, stage:Stage IIB, alive, 2056 days
5492.5
TCGA-FU-A3HZ-01A
64 years, female, white, stage:Stage IIA, alive, 1103 days
5386.1
TCGA-EX-A69L-01A
41 years, female, asian, stage:Stage IB, alive, 602 days
5335.8
TCGA-DS-A1OC-01A
47 years, female, white, stage:Stage IB, alive, 376 days
5295.1
TCGA-EK-A2RJ-01A
51 years, female, white, stage:Stage IB, alive, 53 days
5292.6
TCGA-EK-A2RO-01A
59 years, female, american indian or alaska native, stage:Stage IIB, alive, 2 days
5271.2
TCGA-C5-A7UC-01A
48 years, female, white, stage:Stage IB, dead, 523 days
5270.9
TCGA-Q1-A73O-01A
37 years, female, stage:Stage IB, alive, 428 days
5173.1
TCGA-VS-A9UV-01A
74 years, female, stage:Stage IVA, dead, 104 days
5155.3
TCGA-VS-A9UD-01A
73 years, female, white, stage:Stage IIIA, alive, 739 days
5145.1
TCGA-EK-A2RM-01A
40 years, female, white, stage:Stage IB, alive, 50 days
5099.4
TCGA-JW-A852-01A
42 years, female, white, stage:Stage IIB, dead, 252 days
5038.3
TCGA-C5-A8YQ-01A
79 years, female, white, stage:Stage IB, dead, 715 days
4974.2
TCGA-LP-A5U2-01A
30 years, female, asian, stage:Stage IIIB, alive, 9 days
4947.3
TCGA-C5-A3HL-01A
76 years, female, white, stage:Stage IB, alive, 621 days
4925.6
TCGA-FU-A3HY-01A
47 years, female, white, stage:Stage IB, alive, 954 days
4917.2
TCGA-VS-AA62-01A
51 years, female, white, stage:Stage IIB, dead, 469 days
4915.7
TCGA-IR-A3LB-01A
53 years, female, white, stage:Stage IB, dead, 2032 days
4904.5
TCGA-C5-A8XK-01A
30 years, female, black or african american, stage:'--, alive, 3039 days
4896.0
TCGA-C5-A1MQ-01A
35 years, female, white, stage:Stage IIA, alive, 1031 days
4820.2
TCGA-2W-A8YY-01A
51 years, female, white, stage:Stage IB, alive, 533 days
4818.2
TCGA-DS-A3LQ-01A
46 years, female, stage:Stage IIIB, alive, 699 days
4811.0
TCGA-DG-A2KL-01A
53 years, female, stage:Stage IIA, alive, 1367 days
4724.4
TCGA-DS-A0VM-01A
51 years, female, white, stage:Stage IB, alive, 3589 days
4702.8
TCGA-C5-A907-01A
47 years, female, white, stage:Stage IB, alive, 448 days
4702.1
TCGA-C5-A8YR-01A
56 years, female, white, stage:Stage IB, dead, 837 days
4661.4
TCGA-C5-A7UI-01A
42 years, female, black or african american, stage:Stage IB, dead, 2888 days
4588.3
TCGA-JX-A3PZ-01A
25 years, female, white, stage:Stage IB, dead, 642 days
4583.8
TCGA-Q1-A73Q-01A
46 years, female, white, stage:Stage I, alive, 284 days
4525.1
TCGA-MU-A8JM-01A
46 years, female, white, stage:Stage IB, alive, 607 days
4522.1
TCGA-FU-A3TX-01A
78 years, female, stage:Stage IB, alive, 45 days
4479.5
TCGA-MY-A913-01A
28 years, female, black or african american, stage:Stage IIA, alive, 524 days
4427.7
TCGA-VS-A8Q9-01A
79 years, female, white, stage:Stage IB, alive, 1630 days
4318.8
TCGA-BI-A0VS-01A
48 years, female, white, stage:Stage IB, alive, 1735 days
4312.7
TCGA-C5-A7CO-01A
68 years, female, white, stage:Stage IB, alive, 4482 days
4273.6
TCGA-EK-A3GJ-01A
51 years, female, native hawaiian or other pacific islander, stage:Stage IB, alive, 3 days
4235.4
TCGA-FU-A3EO-01A
55 years, female, white, stage:Stage IIB, alive, 490 days
4217.5
TCGA-EA-A439-01A
50 years, female, asian, stage:Stage IIA, alive, 965 days
4149.4
TCGA-C5-A1MK-01A
79 years, female, white, stage:Stage IIIB, dead, 74 days
4121.6
TCGA-C5-A7CG-01A
55 years, female, white, stage:Stage IB, alive, 6408 days
4072.1
TCGA-EK-A2RE-01A
26 years, female, white, stage:Stage IIA, alive, 57 days
4017.5
TCGA-EA-A3HS-01A
35 years, female, white, stage:Stage IB, alive, 959 days
3965.6
TCGA-VS-A8EG-01A
36 years, female, stage:Stage IB, alive, 1386 days
3947.3
TCGA-IR-A3LL-01A
60 years, female, white, stage:Stage IB, alive, 1106 days
3928.8
TCGA-MA-AA41-01A
33 years, female, white, stage:Stage IIB, alive, 279 days
3926.2
TCGA-VS-A8EL-01A
38 years, female, black or african american, stage:Stage IIB, alive, 1992 days
3916.2
TCGA-EK-A2IR-01A
48 years, female, white, stage:Stage IB, alive, 3442 days
3874.4
TCGA-HM-A4S6-01A
51 years, female, white, stage:Stage IIIB, alive, 454 days
3827.8
TCGA-C5-A8XJ-01A
74 years, female, white, stage:Stage IB, alive, 4467 days
3780.5
TCGA-ZJ-A8QR-01A
38 years, female, native hawaiian or other pacific islander, stage:Stage I, dead, 582 days
3730.8
TCGA-VS-A9V0-01A
58 years, female, stage:Stage IB, alive, 573 days
3725.7
TCGA-EA-A5O9-01A
39 years, female, white, stage:Stage IB, alive, 788 days
3718.4
TCGA-C5-A2M2-01A
56 years, female, white, stage:Stage IB, dead, 1011 days
3694.3
TCGA-Q1-A73R-01A
45 years, female, white, stage:Stage I, alive, 567 days
3654.3
TCGA-FU-A3TQ-01A
55 years, female, white, stage:Stage IIIB, alive, 795 days
3648.5
TCGA-C5-A1BM-01A
78 years, female, black or african american, stage:Stage IB, dead, 2520 days
3631.4
TCGA-C5-A902-01A
35 years, female, black or african american, stage:Stage IB, alive, 149 days
3614.9
TCGA-C5-A7X8-01A
35 years, female, white, stage:Stage IB, alive, 83 days
3609.6
TCGA-EK-A2RB-01A
48 years, female, white, stage:Stage IVB, alive, 9 days
3596.8
TCGA-Q1-A6DW-01A
44 years, female, white, stage:Stage I, alive, 534 days
3570.5
TCGA-DG-A2KH-01A
25 years, female, stage:Stage IB, alive, 34 days
3538.6
TCGA-DS-A1OB-01A
45 years, female, white, stage:Stage IB, dead, 861 days
3533.2
TCGA-EK-A2RK-01A
67 years, female, white, stage:Stage IA, alive, 13 days
3532.3
TCGA-C5-A1ME-01A
40 years, female, white, stage:Stage IB, alive, 1756 days
3521.2
TCGA-VS-A9UT-01A
72 years, female, asian, stage:Stage IB, alive, 482 days
3513.8
TCGA-VS-A958-01A
46 years, female, white, stage:Stage IIB, alive, 1525 days
3509.8
TCGA-EA-A97N-01A
38 years, female, white, stage:Stage IB, alive, 11 days
3506.0
TCGA-EK-A2RL-01A
32 years, female, black or african american, stage:Stage IB, dead, 1453 days
3496.7
TCGA-EA-A4BA-01A
49 years, female, white, stage:Stage IB, alive, 755 days
3431.1
TCGA-EA-A50E-01A
45 years, female, asian, stage:Stage IVA, dead, 227 days
3417.9
TCGA-C5-A7X3-01A
70 years, female, white, stage:Stage IIIB, dead, 284 days
3380.4
TCGA-BI-A20A-01A
49 years, female, white, stage:Stage IB, alive, 720 days
3375.5
TCGA-FU-A770-01A
33 years, female, white, stage:Stage IIIB, alive, 34 days
3366.9
TCGA-JX-A3Q0-01A
63 years, female, black or african american, stage:Stage III, alive, 6375 days
3366.5
TCGA-UC-A7PG-01A
44 years, female, white, stage:Stage IIIB, dead, 370 days
3361.9
TCGA-JW-A69B-01A
44 years, female, white, stage:Stage IB, alive, 863 days
3350.7
TCGA-C5-A1MJ-01A
61 years, female, white, stage:Stage IB, dead, 14 days
3336.4
TCGA-VS-A9UR-01A
53 years, female, white, stage:Stage IIA, alive, 793 days
3333.6
TCGA-Q1-A5R2-01A
64 years, female, white, stage:'--, alive, 499 days
3331.1
TCGA-JX-A3Q8-01A
40 years, female, asian, stage:Stage IB, alive, 1357 days
3316.7
TCGA-UC-A7PD-01A
21 years, female, american indian or alaska native, stage:Stage IB, dead, 355 days
3312.0
TCGA-C5-A1MI-01A
50 years, female, white, stage:Stage IB, dead, 1083 days
3269.0
TCGA-EK-A2PK-01A
43 years, female, white, stage:Stage IB, alive, 12 days
3266.1
TCGA-EA-A44S-01A
31 years, female, white, stage:Stage IIIB, alive, 369 days
3257.9
TCGA-MA-AA42-01A
75 years, female, white, stage:Stage IIB, alive, 259 days
3234.4
TCGA-EA-A410-01A
51 years, female, white, stage:Stage IIA, alive, 803 days
3227.1
TCGA-MA-AA3Z-01A
43 years, female, white, stage:Stage IB, alive, 595 days
3222.8
TCGA-MA-AA3Y-01A
48 years, female, white, stage:Stage IB, alive, 542 days
3206.2
TCGA-VS-A952-01A
66 years, female, white, stage:Stage IB, alive, 1778 days
3202.7
TCGA-MA-AA43-01A
48 years, female, white, stage:Stage IIIB, alive, 346 days
3201.9
TCGA-DS-A7WF-01A
41 years, female, stage:Stage IB, dead, 492 days
3191.6
TCGA-VS-A8QC-01A
51 years, female, white, stage:Stage IVA, dead, 350 days
3182.7
TCGA-C5-A2LT-01A
38 years, female, white, stage:Stage IB, alive, 2226 days
3176.9
TCGA-FU-A5XV-01A
32 years, female, white, stage:Stage IIIB, alive, 321 days
3173.2
TCGA-EA-A3QD-01A
59 years, female, white, stage:Stage IIIB, alive, 397 days
3148.5
TCGA-EA-A3HR-01A
57 years, female, white, stage:Stage II, alive, 940 days
3111.4
TCGA-JW-A5VL-01A
37 years, female, american indian or alaska native, stage:Stage IB, alive, 474 days
3056.0
TCGA-JX-A5QV-01A
37 years, female, white, stage:Stage IB, alive, 636 days
2995.2
TCGA-HM-A6W2-01A
34 years, female, black or african american, stage:Stage IVB, alive, 287 days
2984.9
TCGA-WL-A834-01A
57 years, female, white, stage:'--, alive, 791 days
2984.6
TCGA-HM-A3JJ-01A
40 years, female, black or african american, stage:Stage IB, dead, 659 days
2983.0
TCGA-LP-A5U3-01A
40 years, female, asian, stage:Stage IB, alive, 25 days
2963.0
TCGA-EK-A2PM-01A
81 years, female, white, stage:Stage IIB, alive, 18 days
2961.5
TCGA-Q1-A73P-01A
45 years, female, white, stage:Stage IB, alive, 483 days
2958.2
TCGA-C5-A8XI-01A
69 years, female, black or african american, stage:Stage IB, alive, 254 days
2948.7
TCGA-C5-A1M7-01A
37 years, female, white, stage:Stage IB, alive, 1409 days
2913.4
TCGA-MU-A51Y-01A
27 years, female, white, stage:Stage IIA, alive, 854 days
2910.0
TCGA-C5-A8XH-01A
39 years, female, white, stage:Stage IB, dead, 1394 days
2879.6
TCGA-VS-A9U6-01A
52 years, female, white, stage:Stage IVB, alive, 1320 days
2842.1
TCGA-FU-A23L-01A
60 years, female, white, stage:Stage IIA, alive, 725 days
2822.9
TCGA-C5-A7CM-01A
35 years, female, white, stage:Stage IB, alive, 619 days
2815.8
TCGA-MY-A5BE-01A
42 years, female, black or african american, stage:Stage IB, alive, 1066 days
2807.6
TCGA-VS-A9UZ-01A
61 years, female, white, stage:Stage IB, alive, 2044 days
2807.2
TCGA-VS-A9UY-01A
29 years, female, stage:Stage IVB, dead, 555 days
2794.6
TCGA-EA-A6QX-01A
49 years, female, asian, stage:Stage IIIB, alive, 730 days
2790.8
TCGA-4J-AA1J-01A
31 years, female, white, stage:Stage IB, alive, 542 days
2784.7
TCGA-C5-A7UH-01A
55 years, female, white, stage:Stage IIIB, alive, 3988 days
2773.1
TCGA-LP-A4AU-01A
35 years, female, asian, stage:Stage IIIB, alive, 343 days
2748.6
TCGA-C5-A2LY-01A
30 years, female, white, stage:Stage IB, alive, 2383 days
2742.3
TCGA-VS-A8EK-01A
65 years, female, white, stage:Stage IVA, dead, 829 days
2726.3
TCGA-RA-A741-01A
34 years, female, white, stage:Stage IIB, alive, 444 days
2721.3
TCGA-IR-A3LF-01A
64 years, female, white, stage:Stage IB, alive, 2949 days
2715.5
TCGA-VS-A9V4-01A
63 years, female, white, stage:Stage IVA, dead, 132 days
2711.0
TCGA-EA-A5ZD-01A
40 years, female, asian, stage:Stage IB, alive, 830 days
2695.4
TCGA-DR-A0ZL-01A
53 years, female, asian, stage:Stage IB, alive, 2669 days
2686.4
TCGA-BI-A0VR-01A
53 years, female, white, stage:Stage IIIB, alive, 1505 days
2667.0
TCGA-C5-A1MH-01A
71 years, female, white, stage:Stage IIIB, dead, 1186 days
2661.3
TCGA-DS-A5RQ-01A
80 years, female, white, stage:Stage IB, alive, 512 days
2638.4
TCGA-HG-A2PA-01A
38 years, female, white, stage:Stage IB, dead, 773 days
2625.7
TCGA-C5-A7CH-01A
43 years, female, white, stage:Stage IIB, alive, 4694 days
2619.7
TCGA-JW-A5VG-01A
35 years, female, american indian or alaska native, stage:Stage IIA, alive, 834 days
2615.8
TCGA-R2-A69V-01A
42 years, female, white, stage:Stage IB, alive, 596 days
2593.9
TCGA-VS-A9UL-01A
79 years, female, white, stage:Stage IIIB, dead, 442 days
2583.3
TCGA-EK-A3GK-01A
33 years, female, white, stage:Stage IB, alive, 15 days
2552.8
TCGA-C5-A905-01A
37 years, female, black or african american, stage:Stage IB, alive, 4879 days
2533.4
TCGA-EK-A2R9-01A
58 years, female, white, stage:Stage IB, alive, 4 days
2526.7
TCGA-C5-A7UE-01A
45 years, female, white, stage:Stage IB, alive, 4738 days
2522.3
TCGA-FU-A23K-01A
28 years, female, white, stage:Stage IIIB, alive, 372 days
2506.8
TCGA-EK-A2GZ-01A
64 years, female, black or african american, stage:Stage IIIB, alive, 383 days
2493.6
TCGA-VS-A9UO-01A
43 years, female, white, stage:Stage IIB, alive, 1456 days
2488.6
TCGA-VS-A8QH-01A
76 years, female, white, stage:Stage IB, dead, 1210 days
2481.0
TCGA-JW-A5VJ-01A
56 years, female, american indian or alaska native, stage:Stage IIB, alive, 652 days
2466.0
TCGA-VS-A950-01A
42 years, female, stage:Stage IIIA, alive, 1221 days
2452.3
TCGA-ZJ-AAX4-01A
85 years, female, white, stage:Stage II, alive, 21 days
2444.6
TCGA-IR-A3LK-01A
69 years, female, white, stage:Stage IB, dead, 908 days
2414.3
TCGA-EA-A3QE-01A
45 years, female, white, stage:Stage IB, alive, 761 days
2410.3
TCGA-C5-A8YT-01A
36 years, female, white, stage:Stage IB, dead, 633 days
2399.1
TCGA-EK-A2RC-01A
33 years, female, stage:Stage IB, alive, 129 days
2377.9
TCGA-C5-A1MN-01A
42 years, female, white, stage:Stage IIIB, dead, 1245 days
2361.0
TCGA-EA-A3HU-01A
43 years, female, white, stage:Stage II, alive, 1013 days
2357.8
TCGA-VS-A9UI-01A
76 years, female, white, stage:Stage IIB, dead, 1372 days
2352.4
TCGA-VS-A9U7-01A
30 years, female, white, stage:Stage IB, alive, 1472 days
2343.6
TCGA-VS-A9UM-01A
39 years, female, black or african american, stage:Stage IVB, dead, 829 days
2310.7
TCGA-MY-A5BD-01A
62 years, female, white, stage:Stage IIB, alive, 1667 days
2307.0
TCGA-EX-A449-01A
42 years, female, white, stage:Stage IVB, alive, 447 days
2290.0
TCGA-FU-A3YQ-01A
35 years, female, white, stage:Stage IB, alive, 861 days
2277.4
TCGA-C5-A1M8-01A
43 years, female, white, stage:Stage IB, alive, 919 days
2235.0
TCGA-VS-A9V3-01A
62 years, female, white, stage:Stage IVB, alive, 540 days
2231.8
TCGA-VS-A8QM-01A
47 years, female, stage:Stage IVB, dead, 951 days
2219.2
TCGA-DS-A1OA-01A
77 years, female, asian, stage:Stage IB, dead, 879 days
2211.2
TCGA-EA-A43B-01A
43 years, female, white, stage:Stage IB, alive, 791 days
2202.1
TCGA-EK-A2PG-01A
88 years, female, black or african american, stage:'--, alive, 46 days
2180.6
TCGA-VS-A9V1-01A
46 years, female, white, stage:Stage IVB, dead, 157 days
2143.6
TCGA-UC-A7PF-01A
44 years, female, stage:Stage IB, dead, 2859 days
2140.2
TCGA-ZX-AA5X-01A
64 years, female, white, stage:Stage IIIB, alive, 119 days
2137.8
TCGA-EK-A2R7-01A
45 years, female, white, stage:Stage IB, alive, 27 days
2114.2
TCGA-LP-A4AX-01A
45 years, female, asian, stage:Stage IB, alive, 380 days
2082.3
TCGA-FU-A57G-01A
49 years, female, white, stage:Stage IB, alive, 1078 days
2067.6
TCGA-DS-A1O9-01A
75 years, female, white, stage:Stage IVA, dead, 266 days
2033.0
TCGA-VS-A9UB-01A
54 years, female, stage:Stage IIB, alive, 911 days
2008.2
TCGA-C5-A7XC-01A
26 years, female, white, stage:Stage IB, alive, 1551 days
1989.7
TCGA-C5-A1MP-01A
34 years, female, black or african american, stage:Stage IB, alive, 109 days
1987.0
TCGA-EA-A1QT-01A
47 years, female, white, stage:Stage IB, alive, 1243 days
1974.2
TCGA-C5-A2M1-01A
37 years, female, white, stage:Stage IB, alive, 1169 days
1958.1
TCGA-VS-A94Z-01A
38 years, female, white, stage:Stage IIB, alive, 1015 days
1939.1
TCGA-VS-A9UC-01A
32 years, female, stage:Stage IIB, alive, 825 days
1925.7
TCGA-C5-A3HF-01A
24 years, female, white, stage:Stage IB, dead, 543 days
1925.4
TCGA-XS-A8TJ-01A
41 years, female, black or african american, stage:Stage IB, alive, 890 days
1924.5
TCGA-VS-A8Q8-01A
26 years, female, white, stage:Stage IB, dead, 978 days
1914.0
TCGA-EA-A3HT-01A
68 years, female, white, stage:Stage IB, alive, 954 days
1874.5
TCGA-FU-A3NI-01A
45 years, female, white, stage:Stage IB, dead, 638 days
1818.7
TCGA-EX-A8YF-01A
44 years, female, white, stage:Stage IB, alive, 473 days
1817.4
TCGA-UC-A7PI-01A
44 years, female, white, stage:Stage IB, alive, 2114 days
1805.6
TCGA-MU-A5YI-01A
60 years, female, black or african american, stage:Stage IA, alive, 1053 days
1796.5
TCGA-Q1-A5R3-01A
56 years, female, white, stage:'--, alive, 485 days
1795.7
TCGA-EK-A2PL-01A
36 years, female, white, stage:Stage IIIB, alive, 13 days
1781.8
TCGA-C5-A2LS-01A
37 years, female, white, stage:Stage IB, alive, 1345 days
1781.5
TCGA-DG-A2KM-01A
46 years, female, stage:Stage IB, alive, 1946 days
1772.0
TCGA-C5-A1M5-01A
53 years, female, white, stage:Stage IB, dead, 2052 days
1771.6
TCGA-Q1-A6DV-01A
36 years, female, asian, stage:Stage IB, alive, 491 days
1768.5
TCGA-VS-A8QF-01A
42 years, female, white, stage:Stage IIB, alive, 1800 days
1756.3
TCGA-IR-A3LA-01A
60 years, female, white, stage:Stage IB, alive, 4172 days
1734.4
TCGA-EK-A3GN-01A
47 years, female, white, stage:Stage IIIB, alive, 27 days
1733.2
TCGA-ZJ-AAXA-01A
64 years, female, white, stage:Stage IB, alive, 43 days
1717.6
TCGA-EK-A2RA-01A
74 years, female, stage:Stage IIA, alive, 1246 days
1675.8
TCGA-IR-A3LC-01A
40 years, female, white, stage:Stage IB, alive, 3935 days
1611.3
TCGA-EA-A5ZE-01A
54 years, female, asian, stage:Stage IB, alive, 829 days
1574.9
TCGA-DS-A0VK-01A
45 years, female, white, stage:Stage IB, dead, 1118 days
1572.4
TCGA-DR-A0ZM-01A
61 years, female, white, stage:Stage IIIB, alive, 1791 days
1550.2
TCGA-C5-A7CJ-01A
42 years, female, white, stage:Stage IIA, dead, 3097 days
1540.7
TCGA-Q1-A5R1-01A
32 years, female, white, stage:Stage IB, alive, 474 days
1441.2
TCGA-MA-AA3X-01A
50 years, female, black or african american, stage:Stage IIIB, alive, 617 days
1416.7
TCGA-EA-A411-01A
50 years, female, white, stage:Stage IB, alive, 747 days
1400.8
TCGA-JW-A5VI-01A
45 years, female, american indian or alaska native, stage:Stage IIB, alive, 747 days
1388.9
TCGA-C5-A1BL-01A
32 years, female, white, stage:Stage IB, alive, 5271 days
1381.3
TCGA-FU-A40J-01A
38 years, female, white, stage:Stage IIIB, alive, 426 days
1365.6
TCGA-VS-A959-01A
76 years, female, stage:Stage IIB, alive, 1561 days
1290.9
TCGA-DS-A0VL-01A
25 years, female, white, stage:Stage IB, dead, 1692 days
1272.8
TCGA-VS-A9UQ-01A
32 years, female, stage:Stage IB, alive, 1263 days
1250.8
TCGA-FU-A2QG-01A
29 years, female, white, stage:Stage IB, alive, 579 days
1241.6
TCGA-Q1-A6DT-01A
55 years, female, white, stage:Stage I, dead, 275 days
1170.1
TCGA-EK-A2RN-01A
45 years, female, white, stage:Stage IB, alive, 71 days
1117.8
TCGA-VS-A9V2-01A
29 years, female, white, stage:Stage IB, alive, 555 days
904.4
TCGA-PN-A8MA-01A
43 years, female, black or african american, stage:Stage IIB, alive, 90 days
799.3
TCGA-VS-A9V5-01A
50 years, female, white, stage:Stage IIB, dead, 494 days
631.7
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CERVICAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.