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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MGP is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
79.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
1602.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
629.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
570.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
529.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
503.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
483.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
396.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
395.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
365.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
353.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
350.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
337.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
333.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
326.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
322.3
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
321.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
283.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
274.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
272.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
258.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
255.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
250.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
241.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
238.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
237.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
233.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
232.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
231.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
228.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
226.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
225.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
219.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
211.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
207.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
206.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
204.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
203.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
201.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
193.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
191.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
191.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
189.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
189.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
186.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
182.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
179.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
175.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
175.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
174.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
174.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
170.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
167.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
163.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
161.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
158.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
154.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
152.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
151.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
150.8
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
149.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
149.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
148.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
146.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
145.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
143.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
143.0
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
141.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
141.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
138.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
136.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
136.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
134.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
130.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
127.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
125.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
123.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
120.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
118.2
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
117.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
115.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
112.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
110.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
109.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
109.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
109.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
107.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
105.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
99.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
98.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
97.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
97.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
96.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
94.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
92.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
91.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
90.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
86.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
86.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
85.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
84.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
82.5
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
82.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
81.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
81.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
80.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
80.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
80.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
79.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
79.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
78.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
73.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
72.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
72.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
71.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
70.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
70.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
69.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
69.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
69.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
68.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
68.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
67.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
67.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
67.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
67.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
66.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
66.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
63.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
63.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
62.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
61.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
60.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
59.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
59.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
59.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
58.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
57.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
57.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
55.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
55.2
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
54.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
54.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
53.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
53.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
53.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
52.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
52.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
51.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
51.7
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
50.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
49.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
48.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
48.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
47.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
47.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
46.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
46.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
45.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
45.6
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
45.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
44.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
43.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
43.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
43.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
42.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
42.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
42.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
42.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
41.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
41.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
41.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
40.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
40.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
40.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
39.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
38.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
38.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
38.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
37.9
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
37.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
37.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
37.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
37.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
36.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
36.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
35.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
34.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
34.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
34.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
33.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
33.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
33.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
32.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
32.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
32.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
31.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
30.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
30.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
29.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
29.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
29.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
29.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
29.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
28.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
28.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
27.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
27.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
27.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
26.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
26.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
26.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
26.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
26.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
26.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
26.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
25.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
25.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
24.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
24.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
23.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
23.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
23.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
23.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
22.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
22.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
22.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
22.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
21.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
21.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
21.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
20.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
20.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
20.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
20.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
20.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
20.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
19.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
19.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
19.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
19.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
19.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
19.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
19.2
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
19.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
18.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
18.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
18.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
17.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
17.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
17.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
16.7
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
16.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
16.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
16.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
16.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
16.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
16.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
16.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
16.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
15.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
15.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
15.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
15.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
15.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
15.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
15.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
15.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
15.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
15.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
15.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
14.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
14.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
14.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
14.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
13.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
13.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
13.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
13.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
12.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
12.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
12.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
12.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
12.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
12.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
12.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
12.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
12.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
11.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
11.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
11.4
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
11.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
11.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
10.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
10.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
10.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
10.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
10.3
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
10.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
9.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
9.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
9.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
9.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
8.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
8.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
8.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
8.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
8.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
8.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
8.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
8.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
8.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
7.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
7.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
7.7
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
7.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
7.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
7.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
7.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
7.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
7.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
7.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
7.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
6.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
6.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
6.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
6.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
6.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
5.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
5.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
5.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
5.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
5.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
5.1
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
4.8
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
4.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
4.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
4.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
4.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
4.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
4.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
4.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
4.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
4.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
4.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
3.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
3.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
3.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
3.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
3.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
3.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
2.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
2.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
2.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
2.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
2.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
2.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
1.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
1.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
1.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MGP is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
53.6
Number of samples
231
Samples
Sample
Description
TPM
DO45103
0 years, male, NA, stage:3, alive, 450 days
613.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
498.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
439.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
381.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
375.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
303.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
285.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
260.1
DO45251
0 years, female, NA, stage:2, alive, 900 days
258.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
257.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
255.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
250.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
244.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
222.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
220.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
205.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
195.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
185.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
166.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
166.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
156.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
154.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
151.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
149.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
148.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
145.1
DO23515
0 years, male, NA, stage:2, alive, 1230 days
144.8
DO45189
0 years, female, NA, stage:2, alive, 1200 days
140.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
139.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
137.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
124.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
122.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
117.7
DO45139
0 years, male, NA, stage:3, alive, 1320 days
106.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
105.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
105.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
105.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
97.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
94.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
93.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
92.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
88.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
86.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
86.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
85.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
85.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
82.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
81.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
81.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
80.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
78.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
77.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
77.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
75.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
75.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
73.9
DO45121
0 years, male, NA, stage:3, alive, 1530 days
72.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
71.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
65.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
65.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
65.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
63.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
60.6
DO50808
0 years, male, NA, stage:2, alive, 570 days
55.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
54.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
53.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
53.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
52.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
51.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
48.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
48.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
47.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
46.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
45.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
44.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
44.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
43.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
42.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
41.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
41.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
38.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
38.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
37.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
36.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
35.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
32.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
32.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
32.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
29.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
28.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
27.8
DO45241
0 years, male, NA, stage:1, alive, 1080 days
27.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
26.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
26.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
25.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
25.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
25.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
25.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
24.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
24.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
23.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
23.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
22.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
21.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
21.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
20.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
20.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
19.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
18.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
17.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
17.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
17.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
17.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
17.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
16.8
DO45125
0 years, male, NA, stage:3, alive, 1680 days
16.4
DO50802
0 years, male, NA, stage:2, alive, 930 days
15.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
15.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
15.2
DO48677
0 years, male, NA, stage:3, alive, 1140 days
14.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
14.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
13.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
13.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
12.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
12.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
12.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
12.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
12.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
12.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
11.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
11.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
10.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
10.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
10.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
8.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
8.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
8.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
8.3
DO45183
0 years, female, NA, stage:2, dead, 570 days
7.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
7.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
7.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
7.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
7.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
7.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
7.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
6.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
6.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
6.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
6.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
6.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
5.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
5.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
5.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
5.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
5.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
5.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
5.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
5.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
5.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
5.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
4.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
4.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
4.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
4.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
4.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
4.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
4.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
4.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
4.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
3.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
3.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
3.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
3.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
3.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
3.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
3.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
3.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
3.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
3.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
3.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
3.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
3.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
3.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
3.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
3.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
3.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
3.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
2.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
2.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
2.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
2.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
2.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
2.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
2.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
2.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
2.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
2.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
2.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
2.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
2.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
2.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
1.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
1.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
1.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
1.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
1.8
DO48757
0 years, female, NA, stage:3, alive, 480 days
1.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
1.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
1.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
1.6
DO45237
0 years, male, NA, stage:2, alive, 900 days
1.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
1.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
1.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
1.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
1.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
1.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
1.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
1.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
1.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
1.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
1.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
0.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
0.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
0.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
0.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
0.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
0.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
0.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
0.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
0.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
0.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
823
Tumor
2.1
395
Tumor
1.5
716
Normal
1.5
958
Normal
1.5
516
Normal
1.3
452
Normal
1.3
943
Tumor
1.2
975
Tumor
1.2
352
Normal
1.2
355
Tumor
1.2
425
Tumor
1.2
554
Normal
1.2
817
Tumor
1.2
494
Normal
1.1
192
Normal
1.1
466
Normal
1.1
918
Normal
1.0
921
Tumor
1.0
311
Tumor
1.0
455
Tumor
1.0
383
Tumor
1.0
916
Normal
1.0
224
Normal
0.9
976
Normal
0.9
384
Normal
0.9
881
Tumor
0.9
278
Normal
0.9
284
Normal
0.9
223
Tumor
0.9
354
Normal
0.9
312
Normal
0.8
922
Normal
0.8
524
Normal
0.8
883
Tumor
0.8
498
Normal
0.8
715
Tumor
0.8
534
Normal
0.7
492
Normal
0.7
963
Tumor
0.7
332
Normal
0.7
742
Normal
0.6
917
Tumor
0.6
314
Normal
0.6
1044
Normal
0.6
968
Normal
0.6
212
Normal
0.6
627
Tumor
0.6
618
Normal
0.5
375
Tumor
0.5
444
Normal
0.5
463
Tumor
0.5
616
Normal
0.5
877
Tumor
0.5
218
Normal
0.5
513
Tumor
0.5
415
Tumor
0.5
545
Tumor
0.5
938
Normal
0.5
298
Normal
0.5
297
Tumor
0.5
268
Normal
0.4
186
Normal
0.4
1043
Tumor
0.4
744
Normal
0.4
421
Tumor
0.4
966
Normal
0.4
135
Tumor
0.4
574
Normal
0.4
572
Normal
0.4
217
Tumor
0.4
642
Normal
0.4
261
Tumor
0.4
191
Tumor
0.4
697
Tumor
0.4
573
Tumor
0.4
956
Normal
0.4
468
Normal
0.4
517
Tumor
0.4
1045
Tumor
0.4
172
Normal
0.4
536
Normal
0.3
137
Tumor
0.3
925
Tumor
0.3
368
Normal
0.3
615
Tumor
0.3
262
Normal
0.3
364
Normal
0.3
141
Tumor
0.3
698
Normal
0.3
741
Tumor
0.3
148
Normal
0.3
558
Normal
0.3
926
Normal
0.3
328
Normal
0.3
363
Tumor
0.3
568
Normal
0.3
277
Tumor
0.3
514
Normal
0.3
816
Normal
0.3
818
Normal
0.3
564
Normal
0.3
213
Tumor
0.2
474
Normal
0.2
954
Normal
0.2
446
Normal
0.2
272
Normal
0.2
483
Tumor
0.2
636
Normal
0.2
955
Tumor
0.2
538
Normal
0.2
567
Tumor
0.2
852
Normal
0.2
211
Tumor
0.2
196
Normal
0.2
628
Normal
0.2
228
Normal
0.2
416
Normal
0.2
214
Normal
0.2
162
Normal
0.2
563
Tumor
0.1
964
Normal
0.1
528
Normal
0.1
331
Tumor
0.1
412
Normal
0.1
713
Tumor
0.1
924
Normal
0.1
392
Normal
0.1
546
Normal
0.1
426
Normal
0.1
366
Normal
0.1
952
Normal
0.1
553
Tumor
0.1
571
Tumor
0.1
145
Tumor
0.1
525
Tumor
0.1
882
Normal
0.1
142
Normal
0.1
723
Tumor
0.1
884
Normal
0.1
385
Tumor
0.1
491
Tumor
0.0
696
Normal
0.0
138
Normal
0.0
188
Normal
0.0
448
Normal
0.0
433
Tumor
0.0
185
Tumor
0.0
456
Normal
0.0
857
Tumor
0.0
327
Tumor
0.0
493
Tumor
0.0
376
Normal
0.0
222
Normal
0.0
394
Normal
0.0
944
Normal
0.0
923
Tumor
0.0
484
Normal
0.0
195
Tumor
0.0
313
Tumor
0.0
967
Tumor
0.0
737
Tumor
0.0
343
Tumor
0.0
356
Normal
0.0
414
Normal
-0.1
396
Normal
-0.1
427
Tumor
-0.1
1046
Normal
-0.1
617
Tumor
-0.1
146
Normal
-0.1
738
Normal
-0.1
447
Tumor
-0.1
424
Normal
-0.1
727
Tumor
-0.1
283
Tumor
-0.1
518
Normal
-0.1
913
Tumor
-0.1
488
Normal
-0.1
815
Tumor
-0.1
728
Normal
-0.1
743
Tumor
-0.1
422
Normal
-0.1
445
Tumor
-0.1
912
Normal
-0.1
695
Tumor
-0.2
527
Tumor
-0.2
515
Tumor
-0.2
635
Tumor
-0.2
386
Normal
-0.2
413
Tumor
-0.2
714
Normal
-0.2
535
Tumor
-0.2
434
Normal
-0.2
686
Normal
-0.2
428
Normal
-0.2
362
Normal
-0.2
858
Normal
-0.2
271
Tumor
-0.2
824
Normal
-0.3
161
Tumor
-0.3
361
Tumor
-0.3
465
Tumor
-0.3
914
Normal
-0.3
147
Tumor
-0.3
431
Tumor
-0.3
342
Normal
-0.3
641
Tumor
-0.3
286
Normal
-0.3
187
Tumor
-0.3
232
Normal
-0.3
467
Tumor
-0.3
132
Normal
-0.3
557
Tumor
-0.4
365
Tumor
-0.4
221
Tumor
-0.4
915
Tumor
-0.4
136
Normal
-0.4
358
Normal
-0.4
523
Tumor
-0.4
231
Tumor
-0.4
497
Tumor
-0.4
267
Tumor
-0.4
471
Tumor
-0.4
685
Tumor
-0.4
461
Tumor
-0.5
258
Normal
-0.5
388
Normal
-0.5
724
Normal
-0.5
353
Tumor
-0.5
387
Tumor
-0.5
722
Normal
-0.5
533
Tumor
-0.5
851
Tumor
-0.5
344
Normal
-0.5
285
Tumor
-0.5
443
Tumor
-0.5
227
Tumor
-0.5
878
Normal
-0.5
257
Tumor
-0.6
953
Tumor
-0.6
451
Tumor
-0.6
436
Normal
-0.6
473
Tumor
-0.6
526
Normal
-0.6
965
Tumor
-0.6
957
Tumor
-0.6
393
Tumor
-0.7
131
Tumor
-0.7
937
Tumor
-0.7
537
Tumor
-0.7
171
Tumor
-0.7
423
Tumor
-0.7
472
Normal
-0.7
721
Tumor
-0.8
367
Tumor
-0.8
391
Tumor
-0.8
911
Tumor
-0.8
435
Tumor
-0.8
411
Tumor
-0.8
464
Normal
-0.9
487
Tumor
-0.9
462
Normal
-0.9
478
Normal
-1.0
951
Tumor
-1.1
341
Tumor
-1.1
482
Normal
-1.1
432
Normal
-1.1
477
Tumor
-1.1
357
Tumor
-1.4
481
Tumor
-1.6
351
Tumor
-1.9
111
Normal
N/A
112
Tumor
N/A
113
Tumor
N/A
114
Normal
N/A
123
Tumor
N/A
124
Normal
N/A
125
Tumor
N/A
126
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
1016
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
1013
Tumor
N/A
1032
Normal
N/A
1031
Tumor
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
977
Tumor
N/A
978
Normal
N/A
981
Tumor
N/A
861
Tumor
N/A
982
Normal
N/A
862
Normal
N/A
983
Tumor
N/A
863
Tumor
N/A
984
Normal
N/A
864
Normal
N/A
865
Tumor
N/A
745
Tumor
N/A
866
Normal
N/A
746
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
755
Tumor
N/A
756
Normal
N/A
647
Tumor
N/A
648
Normal
N/A
777
Tumor
N/A
778
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
663
Tumor
N/A
664
Normal
N/A
785
Tumor
N/A
665
Tumor
N/A
786
Normal
N/A
666
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
