HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:79.2 nTPM
HPA Brain:95.9 nTPM
GTEx:79.2 nTPM
FANTOM5:383.0 Scaled Tags Per Million
Pig:28.4 nTPM
Mouse:115.1 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051065
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 95.9
Sample id Sample description nTPM
Hippocampus
nTPM: 95.9
2529 Female, age 94, left hemisphere 114.0
2148 Female, age 91, left hemisphere 111.0
1911 Female, age 85, right hemisphere 94.1
1898 Male, age 80, left hemisphere 91.9
1855 Male, age 76, left hemisphere 82.6
2621 Female, age 67, right hemisphere 81.5
Dentate gyrus
nTPM: 73.1
2246 Female, age 85, both hemispheres 90.1
2528 Male, age 74, both hemispheres 84.4
2530 Female, age 94, left hemisphere 74.7
1927 Female, age 91, both hemispheres 72.9
2010 Male, age 76, both hemispheres 60.6
2531 Female, age 67, both hemispheres 55.9
Entorhinal gyrus
nTPM: 83.6
2117 Female, age 91, right hemisphere 137.3
2764 Male, age 80, right hemisphere 87.9
1938 Female, age 85, left hemisphere 85.0
1787 Male, age 76, left hemisphere 76.2
2613 Female, age 94, left hemisphere 58.2
2686 Male, age 75, right hemisphere 57.0
Hippocampus, CA1
nTPM: 90.4
2527 Male, age 74, both hemispheres 128.8
1873 Female, age 85, both hemispheres 94.9
2082 Female, age 91, right hemisphere 94.0
2749 Male, age 80, left hemisphere 75.5
2045 Male, age 76, both hemispheres 58.5
Hippocampus, CA2
nTPM: 84.3
2113 Female, age 91, right hemisphere 114.2
2249 Male, age 74, both hemispheres 108.5
2437 Female, age 94, left hemisphere 79.5
1963 Male, age 80, left hemisphere 76.5
1940 Female, age 85, left hemisphere 73.5
1892 Male, age 76, both hemispheres 53.4
Hippocampus, CA3
nTPM: 80.8
2436 Male, age 74, both hemispheres 104.7
1891 Female, age 85, both hemispheres 91.7
2137 Male, age 80, left hemisphere 79.0
2620 Female, age 94, left hemisphere 77.3
2861 Female, age 67, both hemispheres 69.9
1867 Male, age 76, both hemispheres 62.4
Parahippocampal cortex
nTPM: 88.4
2250 Female, age 67, right hemisphere 110.3
2622 Female, age 67, right hemisphere 103.9
1990 Female, age 91, right hemisphere 95.2
2692 Male, age 74, both hemispheres 91.9
1933 Female, age 85, both hemispheres 90.5
2245 Female, age 91, both hemispheres 90.3
2532 Female, age 72, left hemisphere 80.1
1850 Male, age 80, both hemispheres 79.1
2018 Male, age 76, both hemispheres 77.7
2693 Female, age 94, both hemispheres 65.4
Perirhinal gyrus
nTPM: 82.7
1847 Female, age 91, left hemisphere 103.1
1794 Male, age 80, right hemisphere 89.3
1841 Female, age 85, right hemisphere 83.2
2521 Female, age 94, right hemisphere 70.6
2848 Male, age 76, right hemisphere 67.2
Subiculum
nTPM: 92.4
2729 Female, age 91, right hemisphere 114.9
2619 Male, age 74, both hemispheres 111.4
2438 Female, age 94, left hemisphere 96.9
1977 Female, age 85, both hemispheres 89.0
2042 Male, age 76, both hemispheres 72.2
1901 Male, age 80, both hemispheres 70.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 79.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 79.2
Samples: 197

Max nTPM: 181.4
Min nTPM: 25.9
Std nTPM: 34.2
Median nTPM: 73.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 181.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 176.4
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 173.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 173.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 171.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 167.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 164.9
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 156.0
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 154.8
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 153.4
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 148.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 383.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 383.0
FF:10153-102I9 76 years, female 431.5
FF:10169-103B7 60 years, female 334.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 28.4
Pig sample Sample description nTPM
Subiculum
nTPM: 21.5
Samples: 4

Max nTPM: 24.0
Min nTPM: 20.4
Sample A Female 21.2
Sample B Female 20.4
Sample C Male 20.5
Sample D Male 24.0
Dorsal hippocampus
nTPM: 28.3
Samples: 4

Max nTPM: 41.1
Min nTPM: 21.3
Sample A Female 41.1
Sample B Female 21.3
Sample C Male 27.8
Sample D Male 23.1
Entorhinal cortex
nTPM: 23.0
Samples: 4

Max nTPM: 25.2
Min nTPM: 20.7
Sample A Female 25.2
Sample B Female 22.0
Sample C Male 20.7
Sample D Male 24.2
Ventral hippocampus
nTPM: 21.6
Samples: 4

Max nTPM: 26.1
Min nTPM: 17.9
Sample A Female 20.7
Sample B Female 21.6
Sample C Male 17.9
Sample D Male 26.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 115.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 113.0
Samples: 4

Max nTPM: 122.7
Min nTPM: 103.8
Sample A Male 116.8
Sample B Male 103.8
Sample C Female 122.7
Sample D Female 108.6
Hippocampal formation
nTPM: 115.1
Samples: 4

Max nTPM: 144.0
Min nTPM: 97.4
Sample A Male 101.7
Sample B Male 97.4
Sample C Female 117.3
Sample D Female 144.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
81655578 Antisense, RP_090413_01_C03, Mouse strain C57BL/6J (56 days, male) 3.9
74819240 Antisense, RP_060315_02_C04, Mouse strain C57BL/6J (56 days, male) 2.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org