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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DUSP16 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
26.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
24.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
24.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
22.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
21.9
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
21.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
19.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
19.4
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
19.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
19.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
18.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
18.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
17.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
16.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
16.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
16.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
16.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
16.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
15.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
14.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
13.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
13.4
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
13.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
13.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
13.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
12.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
12.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
12.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
12.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
12.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
12.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
12.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
12.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
12.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
12.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
12.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
12.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
12.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
12.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
12.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
12.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
12.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
11.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
11.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
11.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
11.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
11.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
11.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
11.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
11.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
11.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
11.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
11.1
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
11.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
10.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
10.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
10.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
10.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
10.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
10.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
10.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
10.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
10.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
10.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
10.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
10.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
10.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
10.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
10.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
10.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
10.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
10.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
9.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
9.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
9.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
9.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
9.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
9.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
9.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
9.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
9.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
9.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
9.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
9.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
9.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
9.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
9.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
9.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
9.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
9.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
9.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
8.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
8.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
8.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
8.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
8.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
8.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
8.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
8.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
8.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
8.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
8.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
8.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
7.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
7.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
7.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
7.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
7.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
7.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
7.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
7.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
7.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
7.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
7.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
7.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
7.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
7.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
7.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
7.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
7.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
7.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
7.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
7.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
7.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
7.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
7.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
7.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
7.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
7.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
7.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
7.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
7.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
7.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
7.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
7.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
7.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
7.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
7.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
6.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
6.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
6.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
6.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
6.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
6.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
6.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
6.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
6.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
6.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
6.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
6.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
6.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
6.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
6.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
6.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
6.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
6.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
6.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
6.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
6.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
6.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
6.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
6.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
5.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
5.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
5.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
5.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
5.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
5.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
5.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
5.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
5.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
5.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
5.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
5.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
5.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
5.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
5.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
5.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
5.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
5.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
5.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
5.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
5.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
5.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
5.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
5.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.1
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
5.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
5.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
5.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
5.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
5.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
5.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
5.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
4.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
4.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
4.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
4.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
4.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
4.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
4.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
4.8
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
4.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
4.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
4.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
4.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
4.7
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
4.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
4.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
4.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
4.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
4.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
4.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
4.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
4.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
4.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
4.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
4.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
4.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
4.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
4.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
4.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
4.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
4.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
4.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
4.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
4.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
4.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
4.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
4.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
4.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
4.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
4.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
4.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
4.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
4.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
4.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
4.0
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
4.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
4.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
4.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
3.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
3.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
3.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
3.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
3.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
3.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
3.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
3.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
3.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
3.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
3.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
3.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
3.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
3.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
3.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
3.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
3.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
3.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
3.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
3.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
3.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
3.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
3.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
3.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
3.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
3.2
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
3.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
3.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
3.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
3.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
3.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
3.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
3.0
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
3.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
3.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
3.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
2.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
2.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
2.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
2.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
2.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
2.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
2.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
2.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
2.7
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
2.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
2.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
2.7
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
2.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
2.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
2.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
2.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
2.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
2.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
2.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
2.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
2.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
2.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
2.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
2.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
2.4
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
2.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
2.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
2.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
2.4
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
2.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
2.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
2.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
2.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
2.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
2.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
2.2
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
2.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
2.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
2.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
2.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
2.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
2.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
2.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
2.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
2.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
2.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
2.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
1.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
1.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
1.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
1.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
1.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
1.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
1.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
1.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
1.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
1.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
1.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
1.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
1.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
0.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
0.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.9
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
0.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
0.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DUSP16 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.6
Number of samples
231
Samples
Sample
Description
TPM
DO50817
0 years, male, NA, stage:2, alive, 390 days
47.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
41.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
36.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
32.2
DO45121
0 years, male, NA, stage:3, alive, 1530 days
29.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
29.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
27.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
27.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
27.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
26.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
25.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
25.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
25.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
24.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
24.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
23.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
23.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
22.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
22.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
22.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
22.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
22.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
21.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
21.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
21.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
21.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
21.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
20.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
20.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
20.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
20.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
19.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
19.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
19.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
18.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
18.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
18.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
18.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
18.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
18.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
17.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
17.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
17.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
17.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
16.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
16.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
16.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
16.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
16.3
DO48719
0 years, male, NA, stage:2, alive, 690 days
16.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
16.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
15.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
15.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
15.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
15.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
15.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
15.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
15.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
15.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
15.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
15.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
15.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
15.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
15.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
14.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
14.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
14.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
14.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
14.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
14.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
14.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
14.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
13.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
13.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
13.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
13.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
13.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
13.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
13.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
13.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
13.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
13.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
13.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
12.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
12.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
12.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
12.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
12.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
12.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
12.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
12.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
12.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
12.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
12.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
12.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
12.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
12.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
12.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
12.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
12.2
DO227643
0 years, male, NA, stage:2, alive, 1260 days
12.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
11.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
11.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
11.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
11.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
11.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
11.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
11.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
11.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
11.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
11.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
11.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
11.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
11.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
11.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
11.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
11.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
11.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
11.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
11.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
11.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
11.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
10.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
10.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
10.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
10.8
DO50803
0 years, female, NA, stage:1, alive, 540 days
10.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
10.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
10.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
10.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
10.5
DO45145
0 years, male, NA, stage:3, dead, 60 days
10.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
10.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
10.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
10.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
10.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
10.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
10.2
DO45165
0 years, male, NA, stage:2, alive, 690 days
10.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
10.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
10.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
10.1
DO23540
0 years, male, NA, stage:1, alive, 750 days
10.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
10.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
9.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
9.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
9.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
9.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
9.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
9.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
9.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
9.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
9.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
9.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
9.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
9.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
9.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
9.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
9.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
9.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
9.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
9.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
8.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
8.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
8.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
8.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
8.9
DO45247
0 years, female, NA, stage:2, alive, 210 days
8.6
DO45183
0 years, female, NA, stage:2, dead, 570 days
8.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
8.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
8.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
8.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
8.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
8.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
8.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
8.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
8.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
8.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
8.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
8.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
8.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
7.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
7.8
DO45094
0 years, male, NA, stage:3, alive, 1650 days
7.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
7.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
7.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
7.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
7.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
7.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
7.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
7.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
7.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
7.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
7.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
7.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
6.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
6.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
6.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
6.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
6.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
6.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
6.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
6.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
6.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
6.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
6.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
6.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
5.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
5.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
5.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
5.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
5.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
5.5
DO45269
0 years, male, NA, stage:3, alive, 750 days
5.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
5.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
4.8
DO45273
0 years, male, NA, stage:2, alive, 480 days
4.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
4.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
4.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
4.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
4.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
4.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
4.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
4.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
4.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
4.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
3.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
3.6
DO45149
0 years, female, NA, stage:2, alive, 1260 days
2.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
2.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
2.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
361
Tumor
1.3
498
Normal
0.9
376
Normal
0.8
366
Normal
0.8
482
Normal
0.8
227
Tumor
0.7
258
Normal
0.7
1014
Normal
0.7
492
Normal
0.7
1043
Tumor
0.7
954
Normal
0.6
223
Tumor
0.6
363
Tumor
0.6
462
Normal
0.6
938
Normal
0.6
1032
Normal
0.6
232
Normal
0.6
367
Tumor
0.6
488
Normal
0.5
1015
Tumor
0.5
536
Normal
0.5
384
Normal
0.5
1016
Normal
0.5
416
Normal
0.5
722
Normal
0.5
714
Normal
0.5
984
Normal
0.5
268
Normal
0.5
481
Tumor
0.4
494
Normal
0.4
231
Tumor
0.4
698
Normal
0.4
1042
Normal
0.4
368
Normal
0.4
493
Tumor
0.4
364
Normal
0.4
1022
Normal
0.4
473
Tumor
0.4
412
Normal
0.4
697
Tumor
0.4
716
Normal
0.3
284
Normal
0.3
944
Normal
0.3
982
Normal
0.3
328
Normal
0.3
286
Normal
0.3
411
Tumor
0.3
472
Normal
0.3
448
Normal
0.3
538
Normal
0.3
686
Normal
0.3
554
Normal
0.3
478
Normal
0.3
528
Normal
0.3
534
Normal
0.2
212
Normal
0.2
224
Normal
0.2
447
Tumor
0.2
356
Normal
0.2
696
Normal
0.2
362
Normal
0.2
943
Tumor
0.2
728
Normal
0.2
1044
Normal
0.2
285
Tumor
0.2
484
Normal
0.2
695
Tumor
0.2
546
Normal
0.2
744
Normal
0.2
955
Tumor
0.2
228
Normal
0.2
365
Tumor
0.1
327
Tumor
0.1
535
Tumor
0.1
721
Tumor
0.1
375
Tumor
0.1
715
Tumor
0.1
262
Normal
0.1
981
Tumor
0.1
742
Normal
0.1
474
Normal
0.1
1026
Normal
0.1
978
Normal
0.1
956
Normal
0.1
415
Tumor
0.1
1025
Tumor
0.1
477
Tumor
0.1
713
Tumor
0.0
272
Normal
0.0
267
Tumor
0.0
355
Tumor
0.0
738
Normal
0.0
952
Normal
0.0
553
Tumor
0.0
261
Tumor
0.0
1046
Normal
0.0
271
Tumor
0.0
723
Tumor
-0.1
491
Tumor
-0.1
461
Tumor
-0.1
1045
Tumor
-0.1
471
Tumor
-0.1
727
Tumor
-0.2
383
Tumor
-0.2
1041
Tumor
-0.2
545
Tumor
-0.2
1028
Normal
-0.2
951
Tumor
-0.2
211
Tumor
-0.2
937
Tumor
-0.3
977
Tumor
-0.3
741
Tumor
-0.3
257
Tumor
-0.3
983
Tumor
-0.3
1013
Tumor
-0.4
483
Tumor
-0.4
1031
Tumor
-0.4
685
Tumor
-0.4
487
Tumor
-0.4
1021
Tumor
-0.5
724
Normal
-0.5
497
Tumor
-0.5
283
Tumor
-0.6
743
Tumor
-0.6
537
Tumor
-0.7
527
Tumor
-0.7
533
Tumor
-0.7
953
Tumor
-0.8
737
Tumor
-0.9
1027
Tumor
-1.0
351
Tumor
N/A
352
Normal
N/A
111
Normal
N/A
353
Tumor
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
114
Normal
N/A
357
Tumor
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
123
Tumor
N/A
124
Normal
N/A
125
Tumor
N/A
126
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
131
Tumor
N/A
132
Normal
N/A
135
Tumor
N/A
136
Normal
N/A
137
Tumor
N/A
138
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
817
Tumor
N/A
818
Normal
N/A
141
Tumor
N/A
142
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
388
Normal
N/A
147
Tumor
N/A
148
Normal
N/A
823
Tumor
N/A
824
Normal
N/A
391
Tumor
N/A
392
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
278
Normal
N/A
957
Tumor
N/A
958
Normal
N/A
161
Tumor
N/A
162
Normal
N/A
963
Tumor
N/A
964
Normal
N/A
965
Tumor
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
615
Tumor
N/A
857
Tumor
N/A
616
Normal
N/A
858
Normal
N/A
617
Tumor
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
861
Tumor
N/A
862
Normal
N/A
863
Tumor
N/A
864
Normal
N/A
865
Tumor
N/A
745
Tumor
N/A
866
Normal
N/A
746
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
513
Tumor
N/A
755
Tumor
N/A
514
Normal
N/A
635
Tumor
N/A
756
Normal
N/A
877
Tumor
N/A
515
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
648
Normal
N/A
413
Tumor
N/A
414
Normal
N/A
777
Tumor
N/A
778
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
665
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
666
Normal
N/A
425
Tumor
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
312
Normal
N/A
433
Tumor
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
444
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
568
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
452
Normal
N/A
573
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
341
Tumor
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
344
Normal
N/A
465
Tumor
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
