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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC6A12 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
121.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
95.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
69.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
56.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
46.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
42.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
40.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
33.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
29.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
26.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
26.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
20.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
20.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
19.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
19.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
18.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
18.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
15.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
15.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
15.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
14.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
14.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
14.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
14.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
13.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
12.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
11.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
11.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
10.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
10.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
10.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
9.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
8.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
7.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
6.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
6.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
5.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
5.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
4.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
4.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
3.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
3.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
2.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
2.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
2.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
2.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
2.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
1.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
1.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
1.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
1.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
1.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC6A12 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
145.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
106.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
100.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
95.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
88.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
83.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
82.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
82.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
78.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
76.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
71.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
70.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
67.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
66.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
65.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
64.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
63.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
62.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
62.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
60.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
59.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
59.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
57.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
57.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
57.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
57.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
56.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
55.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
55.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
55.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
54.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
54.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
53.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
53.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
53.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
53.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
53.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
52.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
52.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
52.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
51.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
51.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
50.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
49.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
49.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
47.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
47.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
45.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
45.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
45.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
45.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
44.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
44.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
44.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
44.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
44.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
44.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
44.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
44.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
44.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
43.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
43.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
43.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
43.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
43.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
41.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
41.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
41.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
40.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
40.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
40.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
40.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
39.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
39.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
39.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
39.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
39.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
38.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
38.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
38.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
37.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
36.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
36.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
36.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
36.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
36.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
36.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
36.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
36.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
35.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
35.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
35.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
35.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
34.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
34.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
34.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
34.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
34.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
34.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
34.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
33.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
33.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
33.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
33.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
33.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
32.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
32.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
32.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
32.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
32.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
32.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
32.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
31.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
31.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
31.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
31.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
31.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
30.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
30.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
30.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
30.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
30.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
29.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
29.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
29.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
29.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
29.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
29.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
29.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
29.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
28.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
28.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
28.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
27.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
27.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
27.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
27.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
27.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
27.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
27.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
27.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
27.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
27.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
26.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
26.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
26.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
26.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
26.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
26.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
26.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
26.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
26.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
25.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
25.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
25.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
25.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
25.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
25.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
25.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
24.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
24.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
24.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
24.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
24.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
24.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
24.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
24.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
23.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
23.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
23.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
23.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
23.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
22.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
22.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
22.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
22.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
22.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
22.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
22.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
22.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
22.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
21.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
21.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
21.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
21.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
21.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
21.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
21.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
21.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
21.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
21.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
21.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
21.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
21.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
21.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
21.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
21.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
20.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
20.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
20.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
20.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
20.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
20.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
20.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
20.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
20.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
20.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
20.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
19.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
19.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
19.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
19.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
19.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
19.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
19.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
19.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
19.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
19.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
19.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
19.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
19.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
19.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
19.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
19.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
19.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
19.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
19.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
18.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
18.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
18.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
18.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
18.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
18.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
18.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
18.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
18.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
18.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
18.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
18.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
18.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
17.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
17.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
17.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
17.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
17.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
17.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
17.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
17.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
17.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
17.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
17.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
17.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
17.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
16.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
16.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
16.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
16.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
16.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
16.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
16.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
16.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
16.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
16.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
16.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
16.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
16.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
16.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
15.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
15.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
15.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
15.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
15.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
15.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
15.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
15.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
15.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
15.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
15.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
15.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
15.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
15.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
14.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
14.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
14.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
14.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
14.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
14.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
14.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
14.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
14.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
14.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
14.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
14.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
14.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
14.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
14.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
14.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
14.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
14.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
14.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
13.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
13.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
13.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
13.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
13.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
13.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
13.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
13.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
13.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
13.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
13.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
13.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
13.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
13.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
13.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
13.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
13.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
12.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
12.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
12.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
12.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
12.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
12.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
12.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
12.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
12.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
12.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
12.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
11.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
11.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
11.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
11.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
11.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
11.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
11.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
11.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
11.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
10.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
10.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
10.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
10.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
10.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
10.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
10.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
10.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
10.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
10.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
10.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
10.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
10.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
9.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
9.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
9.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
9.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
9.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
9.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
9.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
9.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
9.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
9.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
9.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
9.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
9.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
9.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
9.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
9.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
9.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
9.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
9.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
8.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
8.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
8.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
8.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
8.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
8.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
8.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
7.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
7.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
7.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
7.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
7.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
7.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
7.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
7.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
7.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
7.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
7.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
7.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
7.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
7.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
7.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
7.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
7.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
7.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
7.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
7.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
7.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
7.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
6.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
6.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
6.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
6.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
6.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
6.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
6.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
6.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
6.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
6.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
6.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
6.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
5.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
5.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
5.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
5.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
5.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
5.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
5.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
5.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
5.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
5.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
5.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
5.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
5.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
5.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
5.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
4.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
4.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
4.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
4.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
4.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
4.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
4.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
4.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
4.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
4.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
4.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
4.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
4.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
4.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
4.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
4.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
3.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
3.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
3.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
3.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
3.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
3.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
3.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
3.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
3.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
3.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
3.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
3.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
3.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
3.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
3.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
3.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
3.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
2.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
2.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
2.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
2.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
2.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
2.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
2.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
2.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
2.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
2.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
2.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
2.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
2.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
2.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
2.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
2.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
2.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
1.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
1.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
1.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
1.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
1.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
1.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
1.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
1.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
1.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
1.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
1.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
1.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
1.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
1.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
0.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
0.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
0.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
0.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
0.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
0.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
0.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
0.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
0.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
0.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC6A12 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
147.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
103.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
99.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
87.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
77.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
76.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
73.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
72.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
72.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
70.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
66.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
64.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
64.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
63.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
61.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
61.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
59.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
56.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
55.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
54.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
52.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
48.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
47.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
46.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
46.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
45.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
44.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
44.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
44.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
42.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
41.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
41.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
41.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
40.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
37.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
36.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
36.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
36.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
36.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
34.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
33.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
32.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
32.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
32.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
31.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
31.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
31.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
30.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
28.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
27.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
27.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
26.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
26.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
26.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
24.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
24.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
23.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
22.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
22.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
21.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
21.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
21.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
21.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
20.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
18.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
17.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
17.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
16.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
15.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
15.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
15.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
15.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
15.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
15.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
14.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
14.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
14.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
14.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
13.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
12.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
11.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
11.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
11.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
10.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
9.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
9.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
7.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
6.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
6.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
5.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
4.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
4.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
3.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
2.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
2.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
1.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
0.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC6A12 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
193.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
176.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
109.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
103.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
93.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
90.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
88.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
85.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
79.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
76.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
72.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
71.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
71.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
66.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
66.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
65.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
65.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
64.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
63.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
63.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
62.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
61.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
60.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
60.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
59.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
59.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
58.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
57.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
56.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
56.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
55.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
54.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
52.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
51.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
51.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
50.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
50.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
50.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
49.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
49.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
48.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
47.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
46.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
45.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
45.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
45.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
45.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
45.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
44.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
43.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
43.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
42.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
42.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
42.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
41.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
40.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
40.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
39.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
39.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
39.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
39.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
38.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
38.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
37.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
37.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
36.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
35.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
35.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
34.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
34.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
34.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
33.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
32.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
32.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
32.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
32.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
30.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
30.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
29.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
28.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
28.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
27.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
27.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
27.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
27.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
26.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
26.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
26.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
26.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
25.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
25.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
25.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
25.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
25.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
25.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
25.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
24.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
24.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
24.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
24.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
24.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
23.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
23.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
23.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
23.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
23.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
23.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
22.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
22.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
22.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
22.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
21.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
21.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
21.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
20.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
20.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
20.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
20.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
19.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
19.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
19.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
19.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
19.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
19.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
19.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
19.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
18.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
18.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
18.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
18.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
18.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
18.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
18.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
18.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
18.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
18.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
17.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
16.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
16.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
15.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
15.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
15.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
15.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
14.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
14.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
14.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
14.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
14.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
14.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
14.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
14.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
14.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
14.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
13.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
13.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
13.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
13.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
13.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
12.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
12.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
12.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
12.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
12.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
12.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
12.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
12.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
11.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
11.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
11.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
11.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
11.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
11.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
10.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
9.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
9.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
9.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
9.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
9.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
9.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
9.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
9.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
9.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
9.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
9.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
9.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
9.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
8.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
8.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
8.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
8.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
8.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
8.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
7.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
7.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
7.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
7.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
7.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
7.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
7.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
6.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
6.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
6.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
6.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
6.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
5.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
5.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
5.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
5.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
5.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
5.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
4.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
4.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
4.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
4.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
4.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
4.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
4.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
4.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
4.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
4.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
4.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
3.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
3.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
3.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
3.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
3.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
3.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
3.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
3.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
3.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
3.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
3.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
3.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
2.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
2.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
2.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
2.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
2.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
2.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
2.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
2.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
2.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
2.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
1.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
1.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
1.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
1.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
0.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
0.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
0.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
0.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
0.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
0.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
0.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001180009
Tumor
2.8
CPT0002270011
Tumor
1.8
CPT0007320003
Tumor
1.7
CPT0088480003
Tumor
1.3
CPT0065430003
Tumor
1.3
CPT0088970003
Tumor
1.2
CPT0079510001
Normal
1.2
CPT0012640003
Normal
1.2
CPT0001230001
Normal
1.1
CPT0079300001
Normal
1.1
CPT0001220008
Tumor
1.1
CPT0086820003
Tumor
1.0
CPT0086950003
Tumor
1.0
CPT0065750003
Tumor
1.0
CPT0009020003
Normal
0.8
CPT0012550003
Tumor
0.8
CPT0012280003
Tumor
0.8
CPT0088640003
Normal
0.7
CPT0069190001
Normal
0.7
CPT0001510001
Normal
0.7
CPT0088500001
Normal
0.7
CPT0025920001
Normal
0.6
CPT0001500009
Tumor
0.6
CPT0063330001
Normal
0.6
CPT0017450001
Normal
0.6
CPT0001190001
Normal
0.5
CPT0001550001
Normal
0.5
CPT0019160001
Normal
0.5
CPT0019130003
Tumor
0.5
CPT0082010001
Normal
0.5
CPT0088900003
Tumor
0.5
CPT0076350001
Normal
0.5
CPT0079430001
Normal
0.4
CPT0078990003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0001350001
Normal
0.3
CPT0086360003
Tumor
0.3
CPT0014350001
Normal
0.3
CPT0078830003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0026420001
Normal
0.3
CPT0064370003
Tumor
0.3
CPT0011410003
Tumor
0.2
CPT0088710001
Normal
0.2
CPT0086890003
Normal
0.2
CPT0000790001
Normal
0.2
CPT0002370001
Normal
0.2
CPT0015810003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0078800003
Tumor
0.2
CPT0077140001
Normal
0.2
CPT0020020001
Normal
0.2
CPT0024670003
Tumor
0.2
CPT0077500001
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0007870001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0065450001
Normal
0.1
CPT0086830003
Normal
0.0
CPT0012090003
Normal
0.0
CPT0089480003
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0023350003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0092740003
Normal
0.0
CPT0092730003
Tumor
-0.1
CPT0012570003
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0014450004
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0079480003
Tumor
-0.2
CPT0002350011
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0023710001
Normal
-0.2
CPT0006950001
Normal
-0.2
CPT0018250001
Normal
-0.2
CPT0092160003
Tumor
-0.2
CPT0014130001
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0019990003
Tumor
-0.2
CPT0089020003
Tumor
-0.2
CPT0012770003
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0066480003
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0010120001
Normal
-0.2
CPT0000870016
Tumor
-0.2
CPT0071150004
Tumor
-0.3
CPT0079000001
Normal
-0.3
CPT0086370003
Normal
-0.3
CPT0088570001
Normal
-0.3
CPT0066520001
Normal
-0.3
CPT0085670003
Tumor
-0.3
CPT0088780001
Normal
-0.3
CPT0025230003
Tumor
-0.3
CPT0084590001
Normal
-0.3
CPT0079180003
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0025050003
Tumor
-0.3
CPT0092800003
Normal
-0.3
CPT0001540009
Tumor
-0.4
CPT0078840001
Normal
-0.4
CPT0025580004
Tumor
-0.4
CPT0012670003
Tumor
-0.4
CPT0013790003
Normal
-0.4
CPT0077310003
Tumor
-0.4
CPT0009080003
Normal
-0.4
CPT0075560003
Tumor
-0.4
CPT0020120003
Tumor
-0.4
CPT0079230003
Tumor
-0.4
CPT0066430001
Normal
-0.4
CPT0025060001
Normal
-0.5
CPT0000780007
Tumor
-0.5
CPT0092790003
Tumor
-0.5
CPT0023690003
Tumor
-0.5
CPT0065810003
Tumor
-0.5
CPT0065820001
Normal
-0.5
CPT0006440003
Tumor
-0.5
CPT0075130003
Tumor
-0.5
CPT0001270001
Normal
-0.5
CPT0025290003
Tumor
-0.5
CPT0000890001
Normal
-0.5
CPT0078660003
Tumor
-0.5
CPT0069160003
Tumor
-0.5
CPT0025350003
Tumor
-0.6
CPT0025610001
Normal
-0.6
CPT0092190003
Normal
-0.6
CPT0069010001
Normal
-0.6
CPT0009000003
Tumor
-0.7
CPT0000640003
Tumor
-0.7
CPT0066470004
Tumor
-0.7
CPT0012180003
Tumor
-0.7
CPT0024680001
Normal
-0.7
CPT0012080003
Tumor
-0.7
CPT0012370003
Tumor
-0.7
CPT0014370004
Tumor
-0.7
CPT0076330003
Tumor
-0.7
CPT0086970003
Normal
-0.8
CPT0079270003
Tumor
-0.8
CPT0010110003
Tumor
-0.8
CPT0081990003
Tumor
-0.8
CPT0077320001
Normal
-0.8
CPT0065870003
Tumor
-0.8
CPT0025170003
Tumor
-0.8
CPT0078510003
Tumor
-0.9
CPT0001260009
Tumor
-0.9
CPT0012900004
Tumor
-0.9
CPT0025880003
Tumor
-0.9
CPT0007860003
Tumor
-0.9
CPT0079410003
Tumor
-0.9
CPT0075570001
Normal
-0.9
CPT0017850003
Tumor
-0.9
CPT0088630003
Tumor
-0.9
CPT0077490003
Tumor
-1.0
CPT0065690003
Tumor
-1.0
CPT0088760003
Tumor
-1.0
CPT0063630003
Tumor
-1.0
CPT0001340003
Tumor
-1.0
CPT0026410003
Tumor
-1.0
CPT0086870003
Tumor
-1.0
CPT0077110003
Tumor
-1.1
CPT0017410003
Tumor
-1.1
CPT0069000003
Tumor
-1.2
CPT0081600003
Tumor
-1.2
CPT0065930003
Tumor
-1.2
CPT0014470001
Normal
-1.2
CPT0021240003
Tumor
-1.3
CPT0010160003
Tumor
-1.3
CPT0011240003
Tumor
-1.4
CPT0088550004
Tumor
-1.5
CPT0009060003
Tumor
-1.6
CPT0075720003
Tumor
-1.7
CPT0025110003
Tumor
-1.9
CPT0084560003
Tumor
-1.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
