HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:37.6 nTPM
HPA Brain:52.7 nTPM
GTEx:37.6 nTPM
FANTOM5:175.5 Scaled Tags Per Million
Pig:30.1 nTPM
Mouse:71.2 nTPM
Allen mouse:15.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019095Antibody CAB013025
Glial cells LowNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 52.7
Sample id Sample description nTPM
Hippocampus
nTPM: 52.1
2529 Female, age 94, left hemisphere 65.6
2621 Female, age 67, right hemisphere 51.7
1911 Female, age 85, right hemisphere 51.6
1898 Male, age 80, left hemisphere 49.5
2148 Female, age 91, left hemisphere 48.4
1855 Male, age 76, left hemisphere 45.9
Dentate gyrus
nTPM: 46.6
2010 Male, age 76, both hemispheres 52.2
2530 Female, age 94, left hemisphere 50.9
2246 Female, age 85, both hemispheres 48.5
2531 Female, age 67, both hemispheres 43.7
1927 Female, age 91, both hemispheres 43.2
2528 Male, age 74, both hemispheres 41.0
Entorhinal gyrus
nTPM: 45.0
1787 Male, age 76, left hemisphere 49.5
2686 Male, age 75, right hemisphere 48.1
1938 Female, age 85, left hemisphere 47.5
2117 Female, age 91, right hemisphere 47.4
2764 Male, age 80, right hemisphere 40.8
2613 Female, age 94, left hemisphere 36.5
Hippocampus, CA1
nTPM: 47.5
2527 Male, age 74, both hemispheres 53.6
1873 Female, age 85, both hemispheres 52.4
2045 Male, age 76, both hemispheres 45.0
2749 Male, age 80, left hemisphere 44.8
2082 Female, age 91, right hemisphere 41.5
Hippocampus, CA2
nTPM: 44.5
1940 Female, age 85, left hemisphere 47.8
1892 Male, age 76, both hemispheres 46.8
2249 Male, age 74, both hemispheres 45.4
2113 Female, age 91, right hemisphere 44.4
2437 Female, age 94, left hemisphere 44.2
1963 Male, age 80, left hemisphere 38.3
Hippocampus, CA3
nTPM: 45.0
1891 Female, age 85, both hemispheres 48.9
1867 Male, age 76, both hemispheres 48.2
2861 Female, age 67, both hemispheres 46.3
2137 Male, age 80, left hemisphere 44.1
2620 Female, age 94, left hemisphere 41.9
2436 Male, age 74, both hemispheres 40.7
Parahippocampal cortex
nTPM: 49.8
2532 Female, age 72, left hemisphere 59.0
2245 Female, age 91, both hemispheres 55.4
2018 Male, age 76, both hemispheres 53.3
2692 Male, age 74, both hemispheres 52.8
1850 Male, age 80, both hemispheres 49.1
2622 Female, age 67, right hemisphere 49.1
1933 Female, age 85, both hemispheres 47.3
2250 Female, age 67, right hemisphere 46.5
2693 Female, age 94, both hemispheres 44.0
1990 Female, age 91, right hemisphere 41.2
Perirhinal gyrus
nTPM: 44.2
1794 Male, age 80, right hemisphere 46.9
1841 Female, age 85, right hemisphere 46.0
2848 Male, age 76, right hemisphere 45.5
2521 Female, age 94, right hemisphere 42.6
1847 Female, age 91, left hemisphere 39.9
Subiculum
nTPM: 52.7
2438 Female, age 94, left hemisphere 67.4
2042 Male, age 76, both hemispheres 54.8
1901 Male, age 80, both hemispheres 50.6
2619 Male, age 74, both hemispheres 48.9
2729 Female, age 91, right hemisphere 48.0
1977 Female, age 85, both hemispheres 46.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 37.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.6
Samples: 197

Max nTPM: 60.1
Min nTPM: 25.1
Std nTPM: 7.1
Median nTPM: 36.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 60.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 59.5
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 59.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 55.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 55.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 54.1
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 53.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 53.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 52.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 52.8
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 52.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 175.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 175.5
FF:10169-103B7 60 years, female 216.0
FF:10153-102I9 76 years, female 134.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 30.1
Pig sample Sample description nTPM
Subiculum
nTPM: 28.0
Samples: 4

Max nTPM: 33.9
Min nTPM: 25.7
Sample A Female 33.9
Sample B Female 25.7
Sample C Male 26.2
Sample D Male 26.3
Dorsal hippocampus
nTPM: 30.1
Samples: 4

Max nTPM: 34.2
Min nTPM: 25.5
Sample A Female 34.2
Sample B Female 28.0
Sample C Male 32.7
Sample D Male 25.5
Entorhinal cortex
nTPM: 26.8
Samples: 4

Max nTPM: 30.2
Min nTPM: 22.4
Sample A Female 27.8
Sample B Female 30.2
Sample C Male 26.9
Sample D Male 22.4
Ventral hippocampus
nTPM: 27.1
Samples: 4

Max nTPM: 29.6
Min nTPM: 23.7
Sample A Female 29.6
Sample B Female 26.5
Sample C Male 23.7
Sample D Male 28.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 71.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.9
Samples: 4

Max nTPM: 62.2
Min nTPM: 59.5
Sample A Male 60.0
Sample B Male 62.2
Sample C Female 62.0
Sample D Female 59.5
Hippocampal formation
nTPM: 71.2
Samples: 4

Max nTPM: 73.3
Min nTPM: 68.6
Sample A Male 68.6
Sample B Male 73.3
Sample C Female 72.6
Sample D Female 70.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 15.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.3
532616 Antisense, RP_040810_02_F02, Mouse strain C57BL/6J (56 days, male) 15.3

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