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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TNS2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
37.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
105.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
87.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
74.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
72.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
66.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
59.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
57.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
56.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
55.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
51.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
51.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
49.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
49.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
48.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
46.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
45.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
44.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
44.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
44.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
43.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
42.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
42.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
42.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
41.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
41.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
40.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
40.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
39.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
39.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
38.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
38.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
36.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
36.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
35.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
34.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
34.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
33.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
32.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
32.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
31.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
30.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
29.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
28.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
27.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
27.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
26.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
25.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
24.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
23.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
23.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
22.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
22.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
22.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
21.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
19.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
19.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
18.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
15.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
15.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
14.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
14.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
13.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
12.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TNS2 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
116.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
116.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
103.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
101.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
100.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
100.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
100.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
99.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
97.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
93.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
92.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
92.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
91.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
91.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
86.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
86.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
86.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
86.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
85.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
85.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
84.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
84.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
83.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
83.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
80.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
80.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
79.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
79.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
78.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
77.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
77.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
76.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
75.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
74.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
74.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
74.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
73.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
73.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
73.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
72.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
72.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
71.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
70.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
70.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
70.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
70.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
69.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
69.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
69.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
68.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
68.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
68.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
68.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
68.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
67.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
67.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
66.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
66.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
66.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
65.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
65.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
65.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
65.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
64.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
64.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
64.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
64.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
64.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
63.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
62.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
62.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
62.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
61.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
61.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
61.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
60.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
60.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
60.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
60.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
60.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
58.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
58.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
58.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
58.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
58.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
58.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
57.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
57.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
57.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
57.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
56.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
56.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
56.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
56.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
56.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
56.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
56.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
56.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
56.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
55.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
55.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
55.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
55.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
54.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
54.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
54.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
53.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
53.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
53.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
53.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
53.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
53.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
53.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
53.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
53.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
53.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
52.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
52.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
51.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
51.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
51.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
51.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
51.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
51.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
51.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
51.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
51.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
50.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
50.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
50.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
50.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
50.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
50.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
50.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
49.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
49.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
49.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
49.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
49.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
49.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
49.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
49.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
49.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
49.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
48.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
48.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
48.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
48.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
48.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
48.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
48.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
47.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
47.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
47.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
47.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
47.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
47.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
47.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
47.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
47.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
46.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
46.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
46.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
46.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
45.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
45.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
45.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
45.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
44.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
44.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
44.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
44.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
43.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
43.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
43.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
43.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
43.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
43.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
43.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
43.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
42.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
42.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
42.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
42.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
42.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
42.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
42.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
42.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
42.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
42.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
42.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
42.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
41.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
41.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
41.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
41.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
41.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
41.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
41.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
41.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
41.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
40.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
40.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
40.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
40.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
40.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
39.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
39.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
39.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
39.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
39.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
39.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
39.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
39.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
39.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
39.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
39.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
38.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
38.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
38.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
38.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
38.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
38.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
37.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
37.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
37.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
37.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
37.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
37.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
37.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
37.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
37.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
37.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
37.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
36.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
36.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
36.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
36.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
36.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
36.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
36.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
36.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
36.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
36.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
36.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
36.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
36.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
35.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
35.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
35.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
35.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
35.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
35.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
35.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
35.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
35.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
35.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
34.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
34.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
34.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
34.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
34.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
34.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
34.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
34.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
34.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
34.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
33.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
33.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
33.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
33.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
33.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
33.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
33.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
33.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
33.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
33.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
33.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
33.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
33.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
33.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
33.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
32.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
32.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
32.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
32.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
32.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
32.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
32.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
32.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
32.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
32.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
32.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
32.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
32.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
32.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
32.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
32.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
32.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
32.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
32.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
32.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
32.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
31.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
31.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
31.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
31.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
31.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
31.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
31.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
31.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
31.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
31.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
30.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
30.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
30.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
30.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
30.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
30.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
30.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
30.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
30.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
30.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
30.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
30.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
29.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
29.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
29.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
29.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
29.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
29.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
29.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
29.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
29.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
29.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
29.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
28.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
28.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
28.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
28.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
28.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
28.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
28.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
28.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
28.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
28.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
28.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
27.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
27.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
27.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
27.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
27.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
27.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
27.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
27.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
27.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
27.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
27.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
27.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
27.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
27.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
27.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
27.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
26.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
26.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
26.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
26.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
25.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
25.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
25.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
25.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
25.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
25.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
24.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
24.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
24.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
24.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
24.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
24.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
24.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
23.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
23.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
23.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
23.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
23.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
23.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
23.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
23.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
22.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
22.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
22.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
22.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
22.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
22.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
22.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
22.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
22.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
21.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
21.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
21.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
21.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
21.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
21.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
21.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
21.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
20.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
20.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
20.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
20.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
19.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
19.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
19.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
19.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
19.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
19.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
19.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
19.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
19.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
19.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
19.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
18.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
18.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
18.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
18.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
18.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
18.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
18.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
17.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
17.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
17.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
17.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
17.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
17.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
16.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
16.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
16.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
16.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
16.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
16.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
16.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
16.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
16.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
16.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
16.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
16.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
15.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
15.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
15.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
15.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
15.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
15.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
15.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
15.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
15.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
14.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
14.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
14.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
14.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
14.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
14.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
13.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
13.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
13.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
12.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
12.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
12.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
12.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
12.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
12.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
11.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
11.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
11.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
11.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
11.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
11.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
10.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
10.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
10.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
10.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
10.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
10.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
10.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
10.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
10.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
9.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
9.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
9.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
9.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
9.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
9.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
9.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
9.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
9.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
9.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
8.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
8.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
8.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
7.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
7.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
7.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
7.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
7.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
7.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
6.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
5.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
5.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
5.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
5.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
5.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
5.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
3.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TNS2 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
41.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
142.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
90.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
83.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
83.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
81.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
74.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
73.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
68.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
67.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
67.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
63.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
63.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
63.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
61.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
60.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
59.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
59.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
57.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
57.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
55.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
55.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
53.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
53.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
53.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
52.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
51.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
50.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
50.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
49.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
49.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
49.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
48.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
47.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
47.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
47.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
46.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
46.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
45.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
45.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
44.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
44.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
42.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
42.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
41.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
40.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
40.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
40.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
40.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
39.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
39.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
38.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
38.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
38.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
38.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
37.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
37.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
36.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
36.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
36.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
35.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
35.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
35.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
34.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
34.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
32.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
32.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
32.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
32.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
32.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
31.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
30.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
30.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
30.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
29.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
29.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
28.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
27.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
26.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
25.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
24.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
23.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
22.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
21.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
21.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
21.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
19.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
19.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
19.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
19.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
17.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
15.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
15.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
14.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
12.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
10.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
9.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
8.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
8.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TNS2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
51.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
49.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
45.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
42.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
41.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
40.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
39.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
35.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
35.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
35.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
34.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
34.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
34.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
33.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
32.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
31.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
31.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
31.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
30.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
29.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
29.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
28.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
27.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
27.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
26.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
26.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
26.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
26.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
26.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
25.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
25.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
25.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
24.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
24.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
24.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
23.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
23.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
23.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
23.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
23.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
22.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
22.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
22.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
22.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
22.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
22.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
22.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
21.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
21.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
21.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
21.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
20.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
20.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
20.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
20.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
20.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
20.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
20.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
20.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
20.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
20.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
19.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
19.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
19.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
19.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
19.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
19.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
18.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
18.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
18.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
18.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
18.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
18.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
18.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
18.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
17.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
17.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
17.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
17.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
17.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
17.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
17.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
16.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
16.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
16.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
16.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
16.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
16.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
16.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
16.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
15.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
15.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
15.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
15.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
14.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
14.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
14.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
14.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
14.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
14.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
14.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
13.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
13.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
13.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
13.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
13.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
13.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
13.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
13.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
13.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
13.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
13.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
13.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
13.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
12.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
12.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
12.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
12.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
12.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
12.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
12.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
12.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
12.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
12.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
12.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
11.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
11.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
11.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
11.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
11.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
11.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
11.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
11.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
11.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
11.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
10.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
10.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
10.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
10.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
10.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
10.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
10.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
10.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
10.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
10.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
10.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
10.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
10.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
10.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
10.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
9.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
9.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
9.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
9.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
9.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
9.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
9.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
9.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
9.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
9.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
9.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
8.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
8.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
8.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
8.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
8.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
8.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
8.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
8.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
8.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
8.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
8.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
8.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
7.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
7.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
7.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
7.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
7.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
7.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
7.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
7.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
7.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
7.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
7.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
7.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
7.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
7.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
7.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
6.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
6.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
6.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
6.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
6.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
6.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
6.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
6.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
6.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
6.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
6.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
6.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
6.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
6.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
6.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
6.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
6.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
6.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
6.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
5.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
5.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
5.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
5.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
5.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
5.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
5.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
5.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
5.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
5.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
5.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
5.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
5.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
5.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
4.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
4.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
4.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
4.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
4.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
4.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
4.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
4.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
4.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
4.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
4.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
4.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
4.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
4.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
3.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
3.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
3.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
3.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
3.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
3.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
3.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
3.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
3.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
3.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
3.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
3.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
3.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
3.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
2.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
2.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
2.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
2.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
2.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
2.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
2.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
1.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
1.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
1.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
1.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
0.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012090003
Normal
0.6
CPT0088760003
Tumor
0.6
CPT0011240003
Tumor
0.6
CPT0075720003
Tumor
0.5
CPT0012080003
Tumor
0.5
CPT0020130001
Normal
0.5
CPT0065450001
Normal
0.5
CPT0077490003
Tumor
0.5
CPT0065820001
Normal
0.5
CPT0013790003
Normal
0.5
CPT0069190001
Normal
0.5
CPT0009080003
Normal
0.5
CPT0025350003
Tumor
0.5
CPT0066480003
Tumor
0.4
CPT0079510001
Normal
0.4
CPT0069010001
Normal
0.4
CPT0012770003
Normal
0.4
CPT0088710001
Normal
0.4
CPT0010120001
Normal
0.4
CPT0088570001
Normal
0.4
CPT0000890001
Normal
0.4
CPT0023360001
Normal
0.4
CPT0075570001
Normal
0.4
CPT0014130001
Normal
0.4
CPT0012290003
Normal
0.4
CPT0078530001
Normal
0.4
CPT0077140001
Normal
0.4
CPT0018250001
Normal
0.4
CPT0025610001
Normal
0.4
CPT0079430001
Normal
0.4
CPT0077320001
Normal
0.4
CPT0081620001
Normal
0.4
CPT0025060001
Normal
0.4
CPT0019160001
Normal
0.4
CPT0088630003
Tumor
0.4
CPT0000660001
Normal
0.3
CPT0086870003
Tumor
0.3
CPT0015910003
Tumor
0.3
CPT0020020001
Normal
0.3
CPT0025920001
Normal
0.3
CPT0065870003
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0010170001
Normal
0.3
CPT0006530001
Normal
0.3
CPT0009020003
Normal
0.3
CPT0087050003
Normal
0.3
CPT0000640003
Tumor
0.3
CPT0086370003
Normal
0.3
CPT0079000001
Normal
0.3
CPT0077500001
Normal
0.3
CPT0063640001
Normal
0.3
CPT0012920003
Normal
0.3
CPT0079300001
Normal
0.3
CPT0000790001
Normal
0.3
CPT0024680001
Normal
0.3
CPT0006730001
Normal
0.3
CPT0089040001
Normal
0.3
CPT0017450001
Normal
0.3
CPT0001510001
Normal
0.3
CPT0025170003
Tumor
0.3
CPT0007470001
Normal
0.3
CPT0001350001
Normal
0.3
CPT0089480003
Normal
0.3
CPT0078940001
Normal
0.3
CPT0088920001
Normal
0.3
CPT0066430001
Normal
0.3
CPT0078670001
Normal
0.3
CPT0006950001
Normal
0.3
CPT0081990003
Tumor
0.2
CPT0086890003
Normal
0.2
CPT0092310003
Normal
0.2
CPT0088500001
Normal
0.2
CPT0092740003
Normal
0.2
CPT0000780007
Tumor
0.2
CPT0082010001
Normal
0.2
CPT0088640003
Normal
0.2
CPT0064400001
Normal
0.2
CPT0012640003
Normal
0.2
CPT0001190001
Normal
0.2
CPT0012370003
Tumor
0.2
CPT0086830003
Normal
0.2
CPT0088780001
Normal
0.2
CPT0014350001
Normal
0.2
CPT0076350001
Normal
0.2
CPT0026420001
Normal
0.2
CPT0001550001
Normal
0.2
CPT0086970003
Normal
0.2
CPT0078840001
Normal
0.2
CPT0001230001
Normal
0.2
CPT0063320003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0023710001
Normal
0.2
CPT0012570003
Normal
0.2
CPT0075560003
Tumor
0.2
CPT0002370001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0092730003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0014470001
Normal
0.1
CPT0017410003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0065690003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0079230003
Tumor
0.1
CPT0066470004
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0079270003
Tumor
0.0
CPT0085670003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0025880003
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0012900004
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0025110003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0011410003
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0021240003
Tumor
-0.2
CPT0025580004
Tumor
-0.3
CPT0078990003
Tumor
-0.3
CPT0006900003
Tumor
-0.3
CPT0086030003
Tumor
-0.3
CPT0007860003
Tumor
-0.3
CPT0069000003
Tumor
-0.3
CPT0077310003
Tumor
-0.3
CPT0026410003
Tumor
-0.3
CPT0001540009
Tumor
-0.3
CPT0079180003
Tumor
-0.4
CPT0017850003
Tumor
-0.4
CPT0078660003
Tumor
-0.4
CPT0077110003
Tumor
-0.4
CPT0092290003
Tumor
-0.4
CPT0065930003
Tumor
-0.4
CPT0025230003
Tumor
-0.4
CPT0065810003
Tumor
-0.4
CPT0012670003
Tumor
-0.4
CPT0078510003
Tumor
-0.4
CPT0079410003
Tumor
-0.4
CPT0065750003
Tumor
-0.4
CPT0024670003
Tumor
-0.4
CPT0007320003
Tumor
-0.4
CPT0079380003
Tumor
-0.4
CPT0020120003
Tumor
-0.5
CPT0088480003
Tumor
-0.5
CPT0009060003
Tumor
-0.5
CPT0092160003
Tumor
-0.5
CPT0064370003
Tumor
-0.5
CPT0075130003
Tumor
-0.5
CPT0010110003
Tumor
-0.5
CPT0002350011
Tumor
-0.6
CPT0002270011
Tumor
-0.6
CPT0088690003
Tumor
-0.6
CPT0001180009
Tumor
-0.6
CPT0001260009
Tumor
-0.6
CPT0065430003
Tumor
-0.6
CPT0084560003
Tumor
-0.6
CPT0086950003
Tumor
-0.6
CPT0012550003
Tumor
-0.7
CPT0086820003
Tumor
-0.7
CPT0014160003
Tumor
-0.7
CPT0069160003
Tumor
-0.7
CPT0012280003
Tumor
-0.7
CPT0088970003
Tumor
-0.7
CPT0001500009
Tumor
-0.7
CPT0014450004
Tumor
-0.8
CPT0063630003
Tumor
-0.8
CPT0086360003
Tumor
-0.9
CPT0001340003
Tumor
-0.9
CPT0076330003
Tumor
-1.0
CPT0088550004
Tumor
-1.0
CPT0025050003
Tumor
-1.1
CPT0081880003
Tumor
-1.1
CPT0015730003
Tumor
-1.1
CPT0023350003
Tumor
-1.3
CPT0078800003
Tumor
-1.5
CPT0012180003
Tumor
-1.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.