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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPFIBP1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
49.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
28.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
27.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
27.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
25.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
22.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
21.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
19.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
18.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
18.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
17.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
17.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
16.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
15.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
14.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
14.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
13.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
13.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
12.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
12.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
12.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
12.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
12.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
11.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
11.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
10.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
10.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
10.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
10.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
10.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
10.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
9.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
9.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
9.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
9.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
8.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
7.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
7.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
7.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
7.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
7.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
7.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
6.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
6.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
6.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
5.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
5.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
5.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
4.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
4.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
4.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
4.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
4.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
4.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
4.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
3.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
3.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
3.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
3.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
3.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
2.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPFIBP1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
41.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
189.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
134.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
134.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
123.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
120.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
120.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
116.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
115.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
114.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
110.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
106.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
104.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
102.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
99.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
98.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
97.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
96.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
94.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
94.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
94.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
94.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
93.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
92.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
92.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
91.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
91.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
91.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
89.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
88.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
88.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
87.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
87.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
87.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
87.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
86.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
86.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
85.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
85.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
84.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
82.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
82.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
81.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
80.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
80.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
80.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
79.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
79.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
78.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
78.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
78.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
77.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
77.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
77.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
77.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
76.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
76.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
76.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
75.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
75.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
74.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
74.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
74.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
74.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
73.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
73.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
73.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
73.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
73.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
73.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
72.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
72.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
72.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
72.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
71.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
71.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
71.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
71.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
71.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
70.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
70.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
70.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
70.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
69.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
68.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
68.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
68.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
68.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
68.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
67.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
67.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
67.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
67.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
67.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
66.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
65.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
65.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
64.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
64.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
64.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
64.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
64.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
64.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
64.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
64.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
64.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
64.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
64.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
63.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
63.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
63.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
63.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
63.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
63.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
62.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
62.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
62.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
61.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
61.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
61.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
61.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
61.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
61.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
60.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
60.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
60.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
60.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
60.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
59.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
59.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
59.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
59.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
58.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
58.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
58.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
58.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
58.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
58.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
57.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
57.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
57.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
57.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
56.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
56.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
55.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
55.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
55.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
55.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
54.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
54.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
54.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
53.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
53.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
52.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
52.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
52.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
52.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
52.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
52.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
52.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
51.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
51.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
51.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
51.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
51.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
51.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
51.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
51.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
51.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
50.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
50.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
49.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
49.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
49.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
49.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
48.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
48.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
48.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
48.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
48.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
48.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
47.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
47.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
47.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
47.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
47.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
47.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
47.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
47.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
46.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
46.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
46.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
46.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
45.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
45.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
45.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
45.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
45.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
44.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
44.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
44.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
44.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
44.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
43.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
43.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
43.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
42.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
42.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
42.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
41.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
41.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
41.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
41.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
41.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
40.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
40.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
40.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
40.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
40.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
40.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
40.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
40.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
40.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
40.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
39.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
39.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
39.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
39.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
39.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
38.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
38.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
38.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
38.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
38.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
38.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
38.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
38.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
37.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
37.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
37.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
37.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
37.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
37.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
37.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
37.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
36.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
36.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
36.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
36.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
36.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
36.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
35.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
35.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
35.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
35.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
35.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
35.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
35.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
35.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
35.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
35.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
35.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
35.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
34.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
34.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
34.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
34.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
34.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
34.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
34.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
34.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
34.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
34.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
33.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
33.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
33.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
33.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
33.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
33.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
33.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
32.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
32.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
32.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
32.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
32.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
31.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
31.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
31.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
31.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
31.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
31.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
31.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
31.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
31.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
31.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
30.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
30.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
30.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
30.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
30.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
30.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
30.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
30.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
30.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
30.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
30.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
30.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
30.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
30.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
29.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
29.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
29.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
29.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
29.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
29.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
29.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
29.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
28.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
28.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
28.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
27.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
27.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
27.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
27.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
27.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
27.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
27.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
27.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
27.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
26.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
26.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
26.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
26.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
26.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
26.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
26.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
26.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
26.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
26.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
26.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
26.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
26.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
25.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
25.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
25.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
25.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
25.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
25.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
25.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
25.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
25.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
24.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
24.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
24.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
24.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
24.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
24.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
24.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
23.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
23.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
23.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
23.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
23.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
23.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
23.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
23.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
23.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
23.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
23.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
22.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
22.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
22.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
22.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
22.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
22.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
21.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
21.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
21.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
21.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
20.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
20.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
20.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
20.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
20.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
20.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
19.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
19.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
19.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
19.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
19.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
19.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
19.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
19.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
18.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
18.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
18.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
18.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
18.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
18.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
18.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
17.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
17.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
17.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
17.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
17.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
17.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
17.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
17.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
17.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
17.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
17.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
17.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
17.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
17.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
17.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
17.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
17.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
16.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
16.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
16.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
16.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
16.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
16.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
16.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
16.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
15.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
15.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
15.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
15.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
15.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
15.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
15.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
14.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
14.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
14.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
14.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
14.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
14.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
14.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
13.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
13.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
13.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
13.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
13.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
13.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
13.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
13.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
13.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
13.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
13.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
13.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
12.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
12.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
12.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
12.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
12.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
12.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
12.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
12.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
12.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
12.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
12.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
12.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
12.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
11.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
11.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
11.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
11.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
11.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
11.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
11.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
11.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
10.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
10.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
10.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
10.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
10.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
10.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
10.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
10.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
9.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
9.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
9.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
9.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
9.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
8.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
8.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
8.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
8.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
8.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
8.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
8.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
7.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
7.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
7.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
7.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
6.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
6.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
6.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
5.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
5.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
5.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
5.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
4.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
4.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
3.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPFIBP1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
63.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
202.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
168.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
161.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
159.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
156.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
150.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
133.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
127.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
124.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
110.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
107.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
107.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
100.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
96.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
95.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
95.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
95.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
91.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
90.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
89.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
87.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
85.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
84.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
84.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
82.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
82.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
81.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
80.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
78.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
77.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
75.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
75.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
73.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
73.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
73.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
71.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
69.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
68.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
68.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
67.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
66.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
65.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
65.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
64.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
63.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
63.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
61.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
60.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
59.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
58.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
57.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
56.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
55.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
55.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
54.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
52.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
51.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
50.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
48.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
48.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
47.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
47.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
46.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
46.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
45.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
43.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
41.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
41.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
41.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
40.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
40.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
39.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
39.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
37.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
36.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
36.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
35.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
35.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
34.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
31.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
31.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
30.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
29.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
27.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
26.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
25.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
24.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
22.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
21.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
20.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
20.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
19.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
19.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
18.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
17.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
13.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
13.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
11.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
10.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPFIBP1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
199.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
195.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
191.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
188.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
183.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
148.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
146.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
144.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
139.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
137.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
133.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
130.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
125.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
125.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
124.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
124.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
120.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
113.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
108.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
106.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
103.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
102.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
96.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
95.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
94.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
94.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
93.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
93.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
93.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
93.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
91.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
90.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
88.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
87.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
84.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
84.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
83.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
81.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
79.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
78.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
78.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
78.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
77.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
77.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
77.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
74.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
74.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
74.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
73.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
73.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
72.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
72.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
72.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
72.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
71.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
69.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
69.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
69.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
68.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
67.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
67.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
67.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
66.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
66.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
65.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
65.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
64.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
64.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
64.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
63.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
62.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
62.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
61.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
61.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
61.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
60.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
60.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
59.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
59.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
59.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
58.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
58.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
58.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
58.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
57.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
57.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
56.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
56.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
56.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
56.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
55.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
54.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
54.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
54.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
53.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
53.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
52.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
52.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
50.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
50.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
49.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
48.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
48.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
47.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
47.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
47.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
46.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
46.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
45.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
45.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
45.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
44.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
44.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
44.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
43.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
43.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
43.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
43.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
43.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
43.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
43.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
42.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
42.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
42.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
42.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
42.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
41.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
41.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
41.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
40.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
40.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
40.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
40.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
40.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
39.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
39.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
39.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
39.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
38.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
38.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
38.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
38.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
38.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
38.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
38.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
37.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
37.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
37.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
37.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
37.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
36.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
36.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
36.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
35.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
35.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
35.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
35.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
34.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
34.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
34.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
33.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
33.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
33.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
33.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
33.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
33.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
32.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
32.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
32.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
32.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
30.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
30.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
30.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
30.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
30.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
30.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
29.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
29.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
29.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
29.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
29.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
29.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
29.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
28.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
28.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
28.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
28.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
27.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
27.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
27.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
27.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
26.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
26.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
26.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
26.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
25.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
25.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
25.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
25.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
25.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
25.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
24.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
24.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
24.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
24.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
24.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
24.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
23.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
22.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
22.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
22.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
21.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
21.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
21.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
21.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
20.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
20.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
20.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
19.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
19.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
19.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
19.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
18.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
18.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
18.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
17.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
17.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
17.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
17.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
17.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
16.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
16.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
16.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
16.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
16.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
16.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
15.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
15.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
15.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
15.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
15.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
15.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
14.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
14.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
13.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
13.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
13.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
13.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
13.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
13.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
12.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
12.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
11.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
11.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
10.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
10.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
10.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
9.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
9.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
9.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
9.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
9.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
8.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
8.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
8.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
8.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
7.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
7.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
7.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
6.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
6.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
5.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
4.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
4.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.0
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078800003
Tumor
1.1
CPT0001270001
Normal
0.9
CPT0014450004
Tumor
0.7
CPT0012370003
Tumor
0.6
CPT0011410003
Tumor
0.6
CPT0001180009
Tumor
0.6
CPT0019130003
Tumor
0.6
CPT0006440003
Tumor
0.6
CPT0065870003
Tumor
0.6
CPT0026410003
Tumor
0.6
CPT0025580004
Tumor
0.6
CPT0077490003
Tumor
0.6
CPT0010160003
Tumor
0.6
CPT0088900003
Tumor
0.6
CPT0009060003
Tumor
0.5
CPT0009000003
Tumor
0.5
CPT0086030003
Tumor
0.5
CPT0014370004
Tumor
0.5
CPT0081990003
Tumor
0.5
CPT0085670003
Tumor
0.5
CPT0065750003
Tumor
0.5
CPT0000780007
Tumor
0.5
CPT0075720003
Tumor
0.5
CPT0088630003
Tumor
0.5
CPT0011240003
Tumor
0.4
CPT0079230003
Tumor
0.4
CPT0006630003
Tumor
0.4
CPT0006900003
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0025170003
Tumor
0.4
CPT0007320003
Tumor
0.4
CPT0077320001
Normal
0.4
CPT0069000003
Tumor
0.4
CPT0088760003
Tumor
0.4
CPT0078930003
Tumor
0.4
CPT0071150004
Tumor
0.4
CPT0001220008
Tumor
0.4
CPT0077110003
Tumor
0.4
CPT0065810003
Tumor
0.4
CPT0012670003
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0086870003
Tumor
0.3
CPT0092190003
Normal
0.3
CPT0069160003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0025350003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0000640003
Tumor
0.3
CPT0000660001
Normal
0.3
CPT0078510003
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0015910003
Tumor
0.3
CPT0078830003
Tumor
0.2
CPT0066480003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0001190001
Normal
0.2
CPT0063640001
Normal
0.2
CPT0019990003
Tumor
0.2
CPT0012550003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0065930003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0065430003
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0021240003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0017850003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0079510001
Normal
0.0
CPT0025110003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0001540009
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0086820003
Tumor
0.0
CPT0079270003
Tumor
0.0
CPT0001340003
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0012290003
Normal
-0.1
CPT0001500009
Tumor
-0.1
CPT0012640003
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0063630003
Tumor
-0.1
CPT0025880003
Tumor
-0.1
CPT0082010001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0075130003
Tumor
-0.1
CPT0088480003
Tumor
-0.1
CPT0084560003
Tumor
-0.1
CPT0025060001
Normal
-0.1
CPT0010110003
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0088690003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0078990003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0001510001
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0069010001
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0066430001
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0092160003
Tumor
-0.2
CPT0075570001
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0076350001
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0009080003
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0006950001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0001350001
Normal
-0.2
CPT0014160003
Tumor
-0.2
CPT0066520001
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0088640003
Normal
-0.3
CPT0078940001
Normal
-0.3
CPT0078840001
Normal
-0.3
CPT0092800003
Normal
-0.3
CPT0088920001
Normal
-0.3
CPT0000790001
Normal
-0.3
CPT0015730003
Tumor
-0.3
CPT0089480003
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0088780001
Normal
-0.3
CPT0023710001
Normal
-0.3
CPT0006730001
Normal
-0.3
CPT0024680001
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0086370003
Normal
-0.3
CPT0088970003
Tumor
-0.3
CPT0078670001
Normal
-0.3
CPT0077140001
Normal
-0.3
CPT0087050003
Normal
-0.3
CPT0086890003
Normal
-0.3
CPT0081620001
Normal
-0.3
CPT0079000001
Normal
-0.3
CPT0020120003
Tumor
-0.3
CPT0086950003
Tumor
-0.4
CPT0076330003
Tumor
-0.4
CPT0012280003
Tumor
-0.4
CPT0012180003
Tumor
-0.4
CPT0078660003
Tumor
-0.5
CPT0088550004
Tumor
-0.5
CPT0023350003
Tumor
-0.5
CPT0081880003
Tumor
-0.5
CPT0025050003
Tumor
-0.6
CPT0002350011
Tumor
-0.7
CPT0079180003
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
