HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:19.4 nTPM
HPA Brain:115.4 nTPM
GTEx:19.4 nTPM
FANTOM5:89.0 Scaled Tags Per Million
Pig:35.2 nTPM
Mouse:18.3 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001924Antibody HPA071162
Glial cells Not detectedHigh
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 115.4
Sample id Sample description nTPM
Hippocampus
nTPM: 111.4
2148 Female, age 91, left hemisphere 124.1
1911 Female, age 85, right hemisphere 123.4
1898 Male, age 80, left hemisphere 115.9
2621 Female, age 67, right hemisphere 115.5
1855 Male, age 76, left hemisphere 105.3
2529 Female, age 94, left hemisphere 84.3
Dentate gyrus
nTPM: 112.2
1927 Female, age 91, both hemispheres 138.1
2531 Female, age 67, both hemispheres 128.2
2530 Female, age 94, left hemisphere 115.9
2010 Male, age 76, both hemispheres 111.0
2246 Female, age 85, both hemispheres 100.7
2528 Male, age 74, both hemispheres 79.1
Entorhinal gyrus
nTPM: 75.5
2686 Male, age 75, right hemisphere 86.3
1787 Male, age 76, left hemisphere 82.9
1938 Female, age 85, left hemisphere 78.0
2764 Male, age 80, right hemisphere 78.0
2613 Female, age 94, left hemisphere 65.4
2117 Female, age 91, right hemisphere 62.4
Hippocampus, CA1
nTPM: 115.4
2749 Male, age 80, left hemisphere 170.3
1873 Female, age 85, both hemispheres 154.6
2045 Male, age 76, both hemispheres 101.1
2527 Male, age 74, both hemispheres 80.6
2082 Female, age 91, right hemisphere 70.2
Hippocampus, CA2
nTPM: 97.0
1963 Male, age 80, left hemisphere 148.1
1892 Male, age 76, both hemispheres 106.8
2437 Female, age 94, left hemisphere 99.5
2113 Female, age 91, right hemisphere 78.4
1940 Female, age 85, left hemisphere 74.9
2249 Male, age 74, both hemispheres 74.5
Hippocampus, CA3
nTPM: 112.1
2137 Male, age 80, left hemisphere 150.3
2620 Female, age 94, left hemisphere 142.9
2861 Female, age 67, both hemispheres 127.2
1891 Female, age 85, both hemispheres 93.3
2436 Male, age 74, both hemispheres 80.5
1867 Male, age 76, both hemispheres 78.7
Parahippocampal cortex
nTPM: 86.3
2532 Female, age 72, left hemisphere 99.1
2622 Female, age 67, right hemisphere 98.4
1850 Male, age 80, both hemispheres 95.8
2245 Female, age 91, both hemispheres 92.8
2018 Male, age 76, both hemispheres 92.7
1933 Female, age 85, both hemispheres 91.5
2693 Female, age 94, both hemispheres 82.4
1990 Female, age 91, right hemisphere 76.6
2250 Female, age 67, right hemisphere 69.4
2692 Male, age 74, both hemispheres 64.7
Perirhinal gyrus
nTPM: 89.7
1794 Male, age 80, right hemisphere 117.2
1841 Female, age 85, right hemisphere 103.4
2848 Male, age 76, right hemisphere 91.4
1847 Female, age 91, left hemisphere 69.0
2521 Female, age 94, right hemisphere 67.6
Subiculum
nTPM: 80.9
2042 Male, age 76, both hemispheres 91.5
2729 Female, age 91, right hemisphere 90.1
2438 Female, age 94, left hemisphere 88.2
1901 Male, age 80, both hemispheres 83.8
2619 Male, age 74, both hemispheres 67.8
1977 Female, age 85, both hemispheres 64.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 19.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.4
Samples: 197

Max nTPM: 45.2
Min nTPM: 7.6
Std nTPM: 6.4
Median nTPM: 19.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 45.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 45.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 37.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 37.4
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 36.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 36.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 32.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 31.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 30.4
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 30.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 29.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 89.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 89.0
FF:10169-103B7 60 years, female 106.9
FF:10153-102I9 76 years, female 71.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 35.2
Pig sample Sample description nTPM
Subiculum
nTPM: 19.5
Samples: 4

Max nTPM: 23.4
Min nTPM: 15.5
Sample A Female 19.1
Sample B Female 15.5
Sample C Male 19.9
Sample D Male 23.4
Dorsal hippocampus
nTPM: 16.6
Samples: 4

Max nTPM: 25.9
Min nTPM: 10.7
Sample A Female 11.9
Sample B Female 17.7
Sample C Male 10.7
Sample D Male 25.9
Entorhinal cortex
nTPM: 35.3
Samples: 4

Max nTPM: 40.4
Min nTPM: 31.5
Sample A Female 40.4
Sample B Female 31.9
Sample C Male 31.5
Sample D Male 37.2
Ventral hippocampus
nTPM: 12.8
Samples: 4

Max nTPM: 14.4
Min nTPM: 11.1
Sample A Female 12.8
Sample B Female 14.4
Sample C Male 12.8
Sample D Male 11.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 18.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.3
Samples: 4

Max nTPM: 19.3
Min nTPM: 17.1
Sample A Male 19.3
Sample B Male 17.5
Sample C Female 17.1
Sample D Female 19.2
Hippocampal formation
nTPM: 12.6
Samples: 4

Max nTPM: 14.3
Min nTPM: 10.8
Sample A Male 14.3
Sample B Male 12.1
Sample C Female 10.8
Sample D Female 13.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
71920499 Antisense, RP_050915_02_B05, Mouse strain C57BL/6J (56 days, male) 0.5
74272480 Antisense, RP_050915_02_B05, Mouse strain C57BL/6J (56 days, male) 0.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org