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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
148.1
nTPM
HPA Brain:
93.6
nTPM
GTEx:
148.1
nTPM
FANTOM5:
106.9
Scaled Tags Per Million
Pig:
73.5
nTPM
Mouse:
194.5
nTPM
Allen mouse:
6.8
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
93.6
Sample id
Sample description
nTPM
Amygdala nTPM: 93.6
2814
Male, age 76, right hemisphere
110.4
2695
Female, age 67, right hemisphere
99.1
1987
Female, age 91, left hemisphere
90.2
2517
Female, age 94, left hemisphere
85.4
2514
Male, age 75, right hemisphere
82.9
Basal amygdala nTPM: 83.9
2110
Male, age 80, left hemisphere
91.0
2609
Male, age 75, right hemisphere
90.2
2685
Female, age 94, left hemisphere
87.2
1955
Male, age 76, both hemispheres
85.8
2243
Female, age 91, right hemisphere
84.6
2827
Female, age 67, right hemisphere
64.7
Central amygdala nTPM: 92.0
1905
Male, age 76, both hemispheres
109.1
2826
Female, age 94, left hemisphere
98.0
2515
Male, age 75, right hemisphere
91.3
2239
Male, age 80, left hemisphere
89.6
2701
Female, age 91, right hemisphere
71.8
Corticomedial amygdala nTPM: 82.6
2428
Male, age 75, right hemisphere
89.8
2242
Female, age 91, right hemisphere
89.1
2829
Male, age 80, left hemisphere
88.1
2429
Female, age 94, left hemisphere
83.0
2240
Male, age 76, both hemispheres
77.1
2535
Female, age 67, right hemisphere
68.7
Lateral amygdala nTPM: 83.4
1883
Male, age 76, both hemispheres
100.6
2534
Female, age 94, left hemisphere
100.2
2516
Male, age 75, right hemisphere
91.1
2255
Female, age 91, right hemisphere
78.4
2256
Male, age 80, left hemisphere
69.6
2830
Female, age 67, right hemisphere
60.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
148.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 148.1
Samples: 152
Max nTPM: 427.7
Min nTPM: 68.1
Std nTPM: 50.6
Median nTPM: 141.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
427.7
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
372.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
352.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
316.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
235.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
231.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
225.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
223.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
221.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
220.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
215.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
211.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
211.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
207.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
207.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
199.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
190.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
190.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
189.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
188.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
188.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
183.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
183.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
179.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
178.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
178.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
178.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
178.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
177.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
176.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
175.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
173.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
171.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
170.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
168.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
166.6
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
166.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
164.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
163.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
163.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
161.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
161.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
160.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
160.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
159.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
158.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
157.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
157.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
157.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
156.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
154.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
153.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
153.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
152.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
152.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
151.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
151.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
151.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
151.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
150.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
149.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
147.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
147.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
147.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
146.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
145.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
145.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
145.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
145.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
144.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
143.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
142.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
142.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
141.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
141.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
141.5
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
141.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
140.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
138.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
138.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
138.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
138.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
138.0
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
136.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
136.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
136.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
136.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
136.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
136.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
134.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
134.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
133.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
133.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
131.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
131.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
131.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
131.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
130.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
130.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
129.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
128.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
127.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
126.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
125.6
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
124.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
122.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
120.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
120.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
119.8
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
119.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
118.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
118.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
118.2
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
117.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
117.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
115.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
115.6
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
115.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
114.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
114.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
113.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
113.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
112.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
112.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
112.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
109.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
109.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
109.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
106.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
106.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
105.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
102.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
101.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
100.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
99.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
99.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
99.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
97.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
97.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
96.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
95.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
93.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
91.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
90.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
87.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
86.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
84.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
84.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
83.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
69.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
69.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
68.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
194.5
Mouse sample
Sample description
nTPM
Amygdala nTPM: 194.5
Samples: 4
Max nTPM: 201.5
Min nTPM: 187.4
Sample A
Male
187.4
Sample B
Male
201.5
Sample C
Female
196.1
Sample D
Female
193.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.