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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HIPK3 is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
71.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
61.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
43.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
42.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
38.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
38.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
31.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
31.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
30.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
30.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
26.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
26.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
25.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
25.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
25.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
23.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
23.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
21.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
20.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
20.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
20.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
20.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
20.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
19.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
19.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
17.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
17.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
16.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
16.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
15.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
15.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
15.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
15.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
15.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
14.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
13.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
12.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
11.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
11.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
11.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
10.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
10.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
10.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
9.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
9.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
9.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
9.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
8.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
8.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
8.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
8.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
8.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
7.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
7.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
7.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
5.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
5.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
5.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
5.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
5.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
5.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HIPK3 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
124.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
103.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
87.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
82.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
66.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
49.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
48.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
46.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
46.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
45.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
43.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
42.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
42.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
41.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
41.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
41.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
41.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
41.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
40.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
40.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
40.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
40.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
40.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
40.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
40.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
40.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
40.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
39.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
39.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
39.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
39.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
39.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
38.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
38.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
38.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
38.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
37.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
37.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
37.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
37.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
37.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
37.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
36.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
36.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
36.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
36.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
36.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
36.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
36.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
36.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
36.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
35.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
35.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
35.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
35.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
35.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
35.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
35.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
35.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
35.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
34.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
34.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
34.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
34.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
34.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
34.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
34.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
34.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
34.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
34.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
34.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
33.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
33.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
33.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
33.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
33.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
33.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
33.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
33.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
33.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
32.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
32.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
32.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
32.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
32.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
32.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
32.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
32.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
32.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
31.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
31.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
31.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
31.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
31.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
31.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
31.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
31.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
31.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
31.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
31.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
31.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
31.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
31.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
30.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
30.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
30.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
30.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
30.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
30.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
30.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
30.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
30.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
29.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
29.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
29.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
29.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
29.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
29.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
29.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
29.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
29.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
29.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
29.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
29.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
29.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
29.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
28.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
28.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
28.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
28.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
28.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
28.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
28.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
28.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
28.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
28.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
28.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
28.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
28.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
28.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
28.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
28.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
28.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
28.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
28.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
28.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
28.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
27.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
27.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
27.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
27.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
27.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
27.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
27.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
27.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
27.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
27.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
27.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
27.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
27.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
27.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
27.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
27.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
27.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
27.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
27.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
27.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
27.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
27.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
26.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
26.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
26.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
26.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
26.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
26.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
26.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
26.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
26.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
26.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
26.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
26.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
26.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
26.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
26.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
25.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
25.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
25.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
25.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
25.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
25.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
25.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
25.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
25.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
25.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
25.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
25.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
25.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
25.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
25.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
25.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
24.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
24.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
24.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
24.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
24.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
24.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
24.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
24.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
24.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
24.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
24.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
24.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
24.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
24.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
24.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
24.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
24.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
24.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
23.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
23.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
23.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
23.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
23.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
23.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
23.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
23.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
23.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
23.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
23.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
23.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
23.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
23.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
23.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
22.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
22.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
22.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
22.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
22.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
22.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
22.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
22.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
22.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
22.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
22.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
22.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
22.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
22.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
22.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
22.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
22.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
22.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
22.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
22.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
21.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
21.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
21.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
21.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
21.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
21.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
21.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
21.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
21.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
21.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
21.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
21.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
21.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
21.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
21.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
21.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
20.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
20.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
20.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
20.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
20.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
20.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
20.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
20.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
20.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
20.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
20.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
20.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
20.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
20.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
20.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
20.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
20.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
20.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
20.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
20.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
20.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
19.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
19.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
19.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
19.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
19.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
19.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
19.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
19.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
19.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
19.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
19.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
19.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
19.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
19.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
19.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
19.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
19.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
19.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
18.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
18.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
18.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
18.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
18.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
18.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
18.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
18.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
18.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
18.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
18.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
18.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
18.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
18.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
18.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
18.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
18.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
18.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
18.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
18.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
18.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
18.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
18.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
18.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
18.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
18.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
18.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
18.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
18.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
17.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
17.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
17.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
17.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
17.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
17.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
17.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
17.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
17.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
17.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
17.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
17.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
17.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
17.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
17.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
16.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
16.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
16.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
16.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
16.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
16.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
16.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
16.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
16.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
16.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
16.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
16.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
16.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
16.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
16.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
16.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
15.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
15.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
15.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
15.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
15.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
15.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
15.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
15.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
15.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
15.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
15.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
15.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
15.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
15.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
15.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
15.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
15.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
15.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
14.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
14.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
14.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
14.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
14.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
14.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
14.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
14.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
14.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
14.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
14.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
14.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
14.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
14.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
14.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
14.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
14.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
14.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
14.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
14.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
14.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
14.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
13.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
13.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
13.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
13.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
13.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
13.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
13.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
13.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
13.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
13.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
13.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
13.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
13.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
13.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
13.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
13.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
13.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
12.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
12.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
12.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
12.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
12.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
12.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
12.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
12.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
12.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
12.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
12.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
11.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
11.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
11.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
11.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
11.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
11.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
11.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
11.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
11.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
11.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
10.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
10.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
10.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
10.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
10.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
10.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
10.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
10.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
10.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
10.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
10.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
10.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
10.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
10.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
10.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
10.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
9.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
9.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
9.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
9.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
9.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
9.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
9.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
9.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
9.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
9.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
9.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
9.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
9.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
9.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
9.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
9.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
9.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
8.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
8.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
8.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
8.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
8.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
8.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
8.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
8.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
8.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
7.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
6.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
6.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
6.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
6.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
6.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
6.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
6.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
5.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
5.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
4.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HIPK3 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
58.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
56.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
51.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
49.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
49.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
47.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
47.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
46.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
46.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
43.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
43.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
42.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
42.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
41.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
39.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
39.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
38.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
38.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
38.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
38.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
38.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
37.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
37.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
36.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
36.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
35.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
35.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
34.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
34.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
33.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
33.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
33.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
33.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
32.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
32.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
32.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
32.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
32.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
32.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
32.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
32.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
31.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
31.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
31.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
31.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
30.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
30.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
30.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
30.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
30.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
30.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
29.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
29.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
29.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
29.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
28.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
27.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
27.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
27.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
26.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
26.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
26.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
26.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
26.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
26.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
26.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
25.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
24.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
24.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
24.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
23.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
23.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
23.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
22.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
22.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
21.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
21.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
21.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
20.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
20.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
20.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
19.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
19.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
18.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
18.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
17.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
16.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
16.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
15.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
14.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
14.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
14.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
11.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
11.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
9.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
9.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HIPK3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
73.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
48.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
47.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
46.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
43.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
43.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
41.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
38.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
37.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
37.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
36.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
36.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
35.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
35.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
35.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
33.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
33.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
32.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
32.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
32.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
31.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
31.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
30.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
30.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
29.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
29.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
29.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
29.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
29.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
29.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
29.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
29.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
29.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
28.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
28.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
28.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
28.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
27.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
27.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
27.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
27.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
26.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
26.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
26.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
26.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
25.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
25.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
25.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
25.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
25.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
24.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
24.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
24.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
24.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
23.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
23.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
23.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
22.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
22.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
22.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
21.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
21.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
21.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
21.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
21.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
21.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
20.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
20.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
20.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
20.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
20.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
20.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
20.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
20.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
19.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
19.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
19.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
19.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
19.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
19.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
19.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
19.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
19.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
18.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
18.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
18.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
18.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
18.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
18.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
18.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
18.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
18.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
18.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
18.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
18.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
17.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
17.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
17.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
17.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
17.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
17.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
17.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
16.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
16.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
16.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
16.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
16.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
16.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
16.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
16.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
16.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
16.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
16.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
15.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
15.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
15.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
15.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
15.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
15.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
15.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
15.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
15.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
15.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
15.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
15.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
14.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
14.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
14.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
14.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
14.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
14.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
14.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
14.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
14.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
14.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
14.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
14.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
14.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
14.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
14.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
14.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
14.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
13.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
13.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
13.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
13.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
13.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
13.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
13.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
13.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
13.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
13.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
12.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
12.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
12.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
12.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
12.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
12.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
12.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
12.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
12.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
12.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
12.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
12.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
12.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
11.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
11.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
11.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
11.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
11.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
11.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
11.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
11.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
11.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
11.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
11.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
11.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
11.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
11.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
10.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
10.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
10.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
10.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
10.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
10.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
10.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
10.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
10.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
10.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
10.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
10.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
9.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
9.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
9.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
9.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
9.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
9.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
9.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
9.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
9.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
9.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
9.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
9.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
9.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
9.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
9.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
9.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
8.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
8.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
8.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
8.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
8.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
8.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
8.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
8.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
8.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
8.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
8.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
8.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
8.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
8.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
7.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
7.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
7.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
7.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
7.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
7.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
7.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
7.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
7.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
7.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
7.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
7.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
6.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
6.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
6.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
6.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
6.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
6.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
6.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
6.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
6.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
6.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
6.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
6.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
6.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
5.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
5.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
5.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
5.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
5.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
5.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
5.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
5.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
5.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
5.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
4.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
4.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
3.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
2.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.3
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
