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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBE4A is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
35.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
27.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
24.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
22.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
22.9
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
21.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
21.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
21.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
20.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
20.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
20.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
20.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
19.6
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
19.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
19.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
18.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
18.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
18.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
18.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
18.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
17.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
17.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
17.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
17.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
17.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
17.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
17.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
16.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
16.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
16.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
16.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
16.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
16.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
16.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
16.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
16.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
16.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
16.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
15.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
15.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
15.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
15.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
15.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
14.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
14.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
14.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
14.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
14.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
14.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
14.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
14.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
14.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
14.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
14.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
14.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
13.9
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
13.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
13.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
13.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
13.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
13.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
13.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
13.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
13.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
13.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
13.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
13.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
13.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
13.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
13.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
12.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
12.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
12.9
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
12.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
12.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
12.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
12.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
12.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
12.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
12.7
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
12.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
12.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
12.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
12.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
12.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
12.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
12.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
12.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
12.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
12.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
12.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
12.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
12.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
12.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
12.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
12.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
12.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
12.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
11.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
11.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
11.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
11.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
11.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
11.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
11.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
11.6
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
11.6
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
11.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
11.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
11.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
11.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
11.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
11.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
11.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
11.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
11.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
11.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
11.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
11.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
11.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
11.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
11.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
11.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
11.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
11.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
11.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
10.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
10.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
10.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
10.9
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
10.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
10.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
10.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
10.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
10.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
10.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
10.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
10.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
10.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
10.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
10.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
10.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
10.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
10.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
10.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
10.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
10.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
10.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
10.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
9.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
9.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
9.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
9.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
9.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
9.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
9.7
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
9.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
9.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
9.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
9.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
9.6
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
9.6
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
9.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
9.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
9.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
9.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
9.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
9.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
9.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
9.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
9.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
9.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
9.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
9.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
9.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
9.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
9.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
9.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
8.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
8.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
8.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
8.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
8.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
8.7
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
8.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
8.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
8.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
8.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
8.6
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
8.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
8.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
8.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
8.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
8.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
8.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
8.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
8.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
8.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
8.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
8.4
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
8.4
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
8.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
8.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
8.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
8.3
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
8.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
8.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
8.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
8.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
8.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
8.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
8.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
7.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
7.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
7.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
7.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
7.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
7.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
7.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
7.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
7.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
7.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
7.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
7.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
7.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
7.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
7.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
7.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
7.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
7.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
7.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
7.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
7.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
7.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
7.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
7.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
7.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
7.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
7.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
7.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
7.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
7.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
7.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
7.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
7.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
7.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
7.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
7.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
6.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
6.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
6.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
6.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
6.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
6.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
6.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
6.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
6.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
6.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
6.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
6.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
6.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
6.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
6.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
6.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
6.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
6.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
6.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
6.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
6.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
6.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
6.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
6.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
6.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
6.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
6.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
6.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
6.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
6.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
6.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
6.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
6.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
6.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
6.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
6.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
6.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
6.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
5.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
5.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
5.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
5.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
5.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
5.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
5.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
5.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
5.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
5.7
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
5.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
5.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
5.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
5.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
5.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
5.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5.4
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
5.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
5.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
5.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
5.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
5.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
5.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
5.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
5.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
5.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
5.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
5.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
5.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
5.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
5.1
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
4.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
4.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
4.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
4.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
4.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
4.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
4.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
4.7
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
4.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
4.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
4.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
4.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
4.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
4.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
4.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
4.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
4.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
4.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
4.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
4.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
4.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
4.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
4.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
4.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
4.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
4.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
3.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
3.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
3.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
3.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
3.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
3.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
3.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBE4A is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.3
Number of samples
231
Samples
Sample
Description
TPM
DO45189
0 years, female, NA, stage:2, alive, 1200 days
35.0
DO45119
0 years, male, NA, stage:3, dead, 510 days
31.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
30.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
27.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
26.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
25.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
24.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
24.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
23.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
23.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
23.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
23.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
22.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
22.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
22.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
22.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
22.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
21.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
21.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
20.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
20.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
20.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
20.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
20.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
19.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
19.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
19.7
DO50791
0 years, female, NA, stage:1, dead, 480 days
19.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
19.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
19.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
19.4
DO50774
0 years, female, NA, stage:2, alive, 720 days
19.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
19.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
19.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
18.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
18.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
18.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
18.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
18.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
18.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
18.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
18.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
18.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
18.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
18.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
18.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
17.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
17.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
17.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
17.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
17.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
17.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
17.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
17.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
17.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
17.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
17.4
DO45281
0 years, male, NA, stage:4, alive, 750 days
17.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
17.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
17.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
17.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
17.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
17.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
16.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
16.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
16.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
16.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
16.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
16.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
16.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
16.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
16.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
16.0
DO23524
0 years, female, NA, stage:2, alive, 1050 days
15.8
DO45235
0 years, female, NA, stage:1, alive, 900 days
15.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
15.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
15.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
15.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
15.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
15.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
15.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
15.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
15.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
15.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
15.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
15.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
15.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
15.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
15.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
15.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
14.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
14.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
14.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
14.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
14.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
14.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
14.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
14.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
14.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
14.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
14.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
14.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
14.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
14.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
14.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
14.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
14.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
14.1
DO45245
0 years, female, NA, stage:2, dead, 240 days
14.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
14.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
14.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
13.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
13.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
13.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
13.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
13.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
13.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
13.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
13.6
DO50778
0 years, male, NA, stage:4, alive, 630 days
13.6
DO48761
0 years, male, NA, stage:2, alive, 870 days
13.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
13.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
13.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
13.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
13.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
13.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
13.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
13.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
13.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
13.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
12.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
12.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
12.8
DO45183
0 years, female, NA, stage:2, dead, 570 days
12.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
12.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
12.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
12.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
12.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
12.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
12.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
12.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
12.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
12.4
DO50804
0 years, male, NA, stage:2, alive, 720 days
12.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
12.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
12.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
12.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
12.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
12.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
12.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
12.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
12.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
12.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
11.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
11.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
11.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
11.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
11.6
DO48737
0 years, male, NA, stage:1, alive, 720 days
11.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
11.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
11.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
11.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
11.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
11.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
11.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
11.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
11.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
11.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
11.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
11.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
11.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
11.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
11.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
11.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
10.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
10.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
10.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
10.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
10.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
10.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
10.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
10.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
10.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
10.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
10.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
10.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
10.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
10.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
10.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
10.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
10.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
10.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
10.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
10.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
9.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
9.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
9.7
DO45307
0 years, female, NA, stage:4, dead, 240 days
9.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
9.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
9.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
9.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
9.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
8.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
8.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
8.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
8.8
DO227801
0 years, female, NA, stage:1, alive, 660 days
8.6
DO45191
0 years, female, NA, stage:2, alive, 1200 days
8.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
8.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
8.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
8.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
8.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
8.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
8.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
8.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
8.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
7.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
7.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
7.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
7.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
7.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
7.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
7.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
6.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
6.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
6.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
6.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
6.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
6.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
5.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
741
Tumor
1.1
635
Tumor
0.9
863
Tumor
0.9
1027
Tumor
0.8
127
Tumor
0.8
727
Tumor
0.8
473
Tumor
0.8
171
Tumor
0.7
745
Tumor
0.7
513
Tumor
0.6
911
Tumor
0.6
435
Tumor
0.6
1045
Tumor
0.6
231
Tumor
0.5
341
Tumor
0.5
257
Tumor
0.5
357
Tumor
0.5
123
Tumor
0.5
313
Tumor
0.5
393
Tumor
0.5
867
Tumor
0.5
431
Tumor
0.4
665
Tumor
0.4
342
Normal
0.4
147
Tumor
0.4
636
Normal
0.4
627
Tumor
0.4
647
Tumor
0.4
465
Tumor
0.3
125
Tumor
0.3
227
Tumor
0.3
128
Normal
0.3
271
Tumor
0.3
354
Normal
0.3
463
Tumor
0.3
358
Normal
0.3
977
Tumor
0.3
196
Normal
0.3
481
Tumor
0.3
222
Normal
0.3
1013
Tumor
0.2
744
Normal
0.2
1021
Tumor
0.2
815
Tumor
0.2
482
Normal
0.2
618
Normal
0.2
161
Tumor
0.2
148
Normal
0.2
862
Normal
0.2
423
Tumor
0.2
426
Normal
0.2
112
Tumor
0.2
915
Tumor
0.2
331
Tumor
0.2
488
Normal
0.2
981
Tumor
0.2
135
Tumor
0.2
415
Tumor
0.2
388
Normal
0.2
298
Normal
0.2
921
Tumor
0.2
1043
Tumor
0.2
162
Normal
0.2
484
Normal
0.2
351
Tumor
0.2
641
Tumor
0.2
568
Normal
0.2
868
Normal
0.2
648
Normal
0.2
356
Normal
0.2
186
Normal
0.2
1046
Normal
0.2
464
Normal
0.2
344
Normal
0.2
824
Normal
0.2
818
Normal
0.1
525
Tumor
0.1
742
Normal
0.1
534
Normal
0.1
232
Normal
0.1
451
Tumor
0.1
111
Normal
0.1
436
Normal
0.1
698
Normal
0.1
258
Normal
0.1
363
Tumor
0.1
537
Tumor
0.1
376
Normal
0.1
955
Tumor
0.1
361
Tumor
0.1
427
Tumor
0.1
132
Normal
0.1
866
Normal
0.1
924
Normal
0.1
714
Normal
0.1
912
Normal
0.1
452
Normal
0.1
938
Normal
0.1
466
Normal
0.1
387
Tumor
0.1
124
Normal
0.1
391
Tumor
0.1
172
Normal
0.1
185
Tumor
0.1
422
Normal
0.1
221
Tumor
0.1
728
Normal
0.1
272
Normal
0.1
913
Tumor
0.1
642
Normal
0.1
944
Normal
0.1
861
Tumor
0.1
664
Normal
0.1
456
Normal
0.1
332
Normal
0.1
114
Normal
0.1
553
Tumor
0.1
878
Normal
0.1
786
Normal
0.1
146
Normal
0.1
314
Normal
0.1
278
Normal
0.1
268
Normal
0.1
462
Normal
0.1
448
Normal
0.1
445
Tumor
0.1
366
Normal
0.1
964
Normal
0.1
737
Tumor
0.1
628
Normal
0.1
546
Normal
0.1
277
Tumor
0.1
746
Normal
0.1
954
Normal
0.1
428
Normal
0.1
572
Normal
0.1
982
Normal
0.1
352
Normal
0.1
663
Tumor
0.1
131
Tumor
0.1
526
Normal
0.1
738
Normal
0.1
1044
Normal
0.1
882
Normal
0.1
922
Normal
0.1
472
Normal
0.1
195
Tumor
0.1
368
Normal
0.1
564
Normal
0.1
424
Normal
0.1
851
Tumor
0.1
958
Normal
0.0
785
Tumor
0.0
1014
Normal
0.0
477
Tumor
0.0
138
Normal
0.0
414
Normal
0.0
142
Normal
0.0
696
Normal
0.0
514
Normal
0.0
523
Tumor
0.0
421
Tumor
0.0
926
Normal
0.0
884
Normal
0.0
666
Normal
0.0
412
Normal
0.0
375
Tumor
0.0
685
Tumor
0.0
554
Normal
0.0
468
Normal
0.0
925
Tumor
0.0
392
Normal
0.0
396
Normal
0.0
126
Normal
0.0
494
Normal
0.0
432
Normal
0.0
145
Tumor
0.0
214
Normal
0.0
777
Tumor
0.0
686
Normal
0.0
756
Normal
0.0
191
Tumor
0.0
695
Tumor
0.0
914
Normal
0.0
943
Tumor
0.0
858
Normal
0.0
1022
Normal
0.0
416
Normal
0.0
574
Normal
0.0
483
Tumor
0.0
364
Normal
0.0
864
Normal
0.0
362
Normal
0.0
516
Normal
0.0
262
Normal
0.0
365
Tumor
0.0
367
Tumor
0.0
188
Normal
0.0
113
Tumor
0.0
1015
Tumor
0.0
1016
Normal
0.0
563
Tumor
0.0
446
Normal
0.0
518
Normal
0.0
571
Tumor
0.0
136
Normal
0.0
328
Normal
0.0
923
Tumor
0.0
662
Normal
0.0
1026
Normal
0.0
716
Normal
0.0
267
Tumor
0.0
444
Normal
0.0
517
Tumor
0.0
228
Normal
0.0
1032
Normal
0.0
722
Normal
0.0
573
Tumor
0.0
956
Normal
0.0
723
Tumor
0.0
312
Normal
0.0
187
Tumor
0.0
671
Tumor
0.0
918
Normal
0.0
672
Normal
0.0
413
Tumor
0.0
394
Normal
-0.1
385
Tumor
-0.1
865
Tumor
-0.1
286
Normal
-0.1
558
Normal
-0.1
857
Tumor
-0.1
874
Normal
-0.1
957
Tumor
-0.1
284
Normal
-0.1
615
Tumor
-0.1
471
Tumor
-0.1
213
Tumor
-0.1
778
Normal
-0.1
984
Normal
-0.1
434
Normal
-0.1
498
Normal
-0.1
816
Normal
-0.1
966
Normal
-0.1
524
Normal
-0.1
217
Tumor
-0.1
474
Normal
-0.1
967
Tumor
-0.1
817
Tumor
-0.1
1041
Tumor
-0.1
218
Normal
-0.1
952
Normal
-0.1
478
Normal
-0.1
976
Normal
-0.1
515
Tumor
-0.1
852
Normal
-0.1
538
Normal
-0.1
492
Normal
-0.1
386
Normal
-0.1
1028
Normal
-0.1
968
Normal
-0.1
343
Tumor
-0.1
212
Normal
-0.1
411
Tumor
-0.1
224
Normal
-0.1
192
Normal
-0.1
433
Tumor
-0.1
384
Normal
-0.1
141
Tumor
-0.1
978
Normal
-0.1
425
Tumor
-0.1
327
Tumor
-0.1
487
Tumor
-0.1
461
Tumor
-0.1
1042
Normal
-0.1
916
Normal
-0.1
617
Tumor
-0.2
261
Tumor
-0.2
715
Tumor
-0.2
283
Tumor
-0.2
533
Tumor
-0.2
951
Tumor
-0.2
697
Tumor
-0.2
493
Tumor
-0.2
755
Tumor
-0.2
713
Tumor
-0.2
528
Normal
-0.2
491
Tumor
-0.2
983
Tumor
-0.2
963
Tumor
-0.2
535
Tumor
-0.2
917
Tumor
-0.2
661
Tumor
-0.2
455
Tumor
-0.2
975
Tumor
-0.2
567
Tumor
-0.2
353
Tumor
-0.2
536
Normal
-0.2
285
Tumor
-0.2
1031
Tumor
-0.3
881
Tumor
-0.3
965
Tumor
-0.3
383
Tumor
-0.3
527
Tumor
-0.3
467
Tumor
-0.3
137
Tumor
-0.3
814
Normal
-0.3
297
Tumor
-0.3
443
Tumor
-0.3
721
Tumor
-0.3
823
Tumor
-0.3
813
Tumor
-0.3
557
Tumor
-0.3
311
Tumor
-0.4
1025
Tumor
-0.4
447
Tumor
-0.4
953
Tumor
-0.4
873
Tumor
-0.4
724
Normal
-0.4
497
Tumor
-0.4
883
Tumor
-0.4
211
Tumor
-0.4
616
Normal
-0.4
355
Tumor
-0.5
877
Tumor
-0.5
223
Tumor
-0.6
395
Tumor
-0.6
545
Tumor
-0.7
743
Tumor
-0.8
937
Tumor
-1.0
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
