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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GALNT18 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
35.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
15.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
14.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
12.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
12.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
12.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
10.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
10.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
9.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
8.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
7.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
7.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
7.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
6.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
6.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
6.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
6.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
6.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
6.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
5.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
5.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
5.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
5.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
4.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
4.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
4.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
4.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
4.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
4.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
3.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
3.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
3.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
3.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
3.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
3.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
3.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
3.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
3.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
3.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
3.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
2.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
2.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
2.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
2.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
2.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
2.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
2.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
2.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
2.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
2.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
2.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
1.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
1.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
1.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
1.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
1.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
1.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GALNT18 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
80.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
79.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
75.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
73.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
72.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
72.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
70.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
70.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
69.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
67.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
64.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
64.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
63.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
62.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
62.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
61.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
61.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
59.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
58.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
57.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
57.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
57.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
56.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
56.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
55.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
55.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
55.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
54.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
54.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
53.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
53.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
53.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
52.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
52.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
52.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
52.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
52.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
51.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
51.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
50.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
50.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
50.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
49.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
49.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
48.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
48.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
48.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
48.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
48.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
47.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
46.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
46.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
46.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
46.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
45.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
45.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
45.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
45.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
44.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
44.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
44.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
44.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
44.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
44.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
43.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
43.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
43.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
43.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
43.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
43.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
42.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
42.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
42.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
42.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
42.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
42.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
42.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
42.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
41.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
41.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
41.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
41.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
40.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
40.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
40.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
40.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
39.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
39.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
39.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
39.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
39.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
39.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
38.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
38.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
38.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
38.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
38.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
38.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
38.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
38.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
38.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
38.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
38.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
38.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
38.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
38.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
38.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
38.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
38.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
37.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
37.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
37.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
37.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
36.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
36.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
36.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
36.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
36.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
36.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
36.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
36.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
36.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
36.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
35.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
35.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
35.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
34.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
34.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
34.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
34.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
34.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
34.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
34.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
34.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
34.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
34.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
34.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
34.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
34.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
34.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
34.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
34.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
34.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
34.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
33.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
33.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
33.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
33.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
33.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
33.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
33.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
33.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
33.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
33.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
33.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
33.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
32.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
32.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
32.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
32.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
32.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
32.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
32.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
32.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
32.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
32.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
32.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
32.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
32.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
31.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
31.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
31.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
31.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
31.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
31.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
31.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
31.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
31.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
31.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
31.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
31.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
31.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
31.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
31.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
31.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
31.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
30.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
30.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
30.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
30.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
30.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
30.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
30.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
30.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
30.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
30.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
29.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
29.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
29.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
29.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
29.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
29.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
29.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
29.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
29.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
29.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
29.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
28.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
28.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
28.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
28.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
28.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
28.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
28.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
27.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
27.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
27.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
27.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
27.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
27.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
27.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
27.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
27.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
27.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
27.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
27.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
27.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
27.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
27.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
27.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
27.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
26.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
26.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
26.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
26.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
26.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
26.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
26.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
26.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
26.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
26.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
26.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
26.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
26.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
26.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
25.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
25.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
25.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
25.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
25.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
25.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
25.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
25.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
25.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
24.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
24.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
24.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
24.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
24.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
24.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
24.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
24.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
24.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
24.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
23.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
23.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
23.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
23.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
23.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
23.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
23.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
23.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
23.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
23.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
23.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
23.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
22.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
22.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
22.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
22.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
22.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
22.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
22.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
22.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
22.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
22.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
22.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
22.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
22.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
22.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
22.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
21.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
21.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
21.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
21.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
21.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
21.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
21.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
21.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
21.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
21.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
21.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
21.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
20.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
20.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
20.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
20.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
20.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
20.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
20.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
20.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
20.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
20.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
20.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
20.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
20.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
20.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
20.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
20.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
20.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
19.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
19.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
19.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
19.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
19.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
19.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
19.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
19.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
19.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
19.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
19.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
19.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
19.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
19.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
18.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
18.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
18.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
18.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
18.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
18.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
18.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
18.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
18.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
18.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
18.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
18.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
18.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
18.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
18.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
18.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
18.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
18.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
18.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
17.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
17.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
17.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
17.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
17.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
17.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
17.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
17.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
17.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
16.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
16.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
16.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
16.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
16.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
16.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
16.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
16.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
16.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
16.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
16.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
15.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
15.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
15.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
15.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
15.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
15.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
15.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
15.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
15.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
15.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
15.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
15.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
15.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
14.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
14.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
14.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
14.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
14.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
14.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
14.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
14.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
14.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
14.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
14.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
14.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
14.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
14.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
14.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
14.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
14.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
13.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
13.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
13.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
13.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
13.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
13.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
13.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
13.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
13.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
13.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
13.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
13.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
13.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
13.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
13.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
13.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
13.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
13.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
13.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
12.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
12.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
12.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
12.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
12.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
12.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
12.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
12.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
12.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
12.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
11.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
11.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
11.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
11.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
11.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
11.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
11.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
11.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
11.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
11.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
11.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
11.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
10.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
10.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
10.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
10.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
10.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
10.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
10.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
10.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
9.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
9.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
9.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
9.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
9.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
9.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
8.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
8.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
8.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
8.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
8.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
8.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
8.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
8.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
8.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
8.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
8.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
8.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
8.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
8.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
7.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
7.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
7.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
7.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
7.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
7.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
7.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
6.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
6.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
6.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
6.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
6.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
6.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
5.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
5.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
5.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
5.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
4.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
4.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
4.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
3.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
3.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
3.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
3.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
3.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
2.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
2.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
2.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
1.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
1.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
1.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
1.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
1.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GALNT18 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
67.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
62.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
58.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
57.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
51.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
49.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
49.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
48.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
48.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
48.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
46.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
45.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
45.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
44.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
44.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
41.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
40.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
40.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
40.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
39.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
39.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
39.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
39.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
37.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
37.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
36.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
36.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
35.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
35.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
35.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
35.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
34.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
34.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
33.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
33.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
33.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
32.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
31.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
31.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
30.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
30.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
30.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
30.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
30.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
30.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
29.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
27.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
27.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
27.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
27.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
27.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
27.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
26.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
26.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
25.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
25.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
25.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
25.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
24.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
24.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
24.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
23.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
23.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
23.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
22.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
21.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
21.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
20.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
20.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
19.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
18.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
18.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
18.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
17.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
17.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
17.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
16.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
15.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
15.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
15.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
14.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
14.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
14.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
14.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
13.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
13.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
13.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
13.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
12.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
12.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
12.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
10.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
10.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
9.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
8.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
4.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GALNT18 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
80.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
74.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
63.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
59.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
50.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
47.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
46.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
45.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
40.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
39.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
37.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
35.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
34.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
34.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
32.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
31.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
29.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
28.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
28.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
27.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
26.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
26.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
26.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
26.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
25.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
25.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
25.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
25.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
24.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
24.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
23.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
23.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
22.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
22.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
21.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
20.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
20.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
20.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
20.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
19.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
19.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
19.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
19.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
18.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
18.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
18.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
18.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
18.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
17.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
17.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
17.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
17.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
17.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
16.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
16.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
16.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
16.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
16.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
16.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
15.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
15.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
15.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
15.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
15.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
15.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
15.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
15.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
15.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
14.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
14.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
14.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
14.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
14.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
14.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
14.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
13.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
13.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
13.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
13.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
12.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
12.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
12.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
12.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
12.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
12.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
12.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
12.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
12.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
11.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
11.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
11.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
11.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
11.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
11.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
11.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
11.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
11.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
11.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
11.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
11.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
10.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
10.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
10.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
10.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
10.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
10.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
10.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
10.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
10.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
10.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
10.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
10.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
9.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
9.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
9.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
9.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
9.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
9.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
9.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
9.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
9.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
9.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
9.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
9.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
9.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
9.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
8.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
8.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
8.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
8.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
8.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
8.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
8.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
8.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
8.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
8.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
8.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
8.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
8.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
7.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
7.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
7.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
7.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
7.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
7.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
7.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
7.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
7.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
7.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
7.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
7.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
7.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
7.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
7.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
7.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
7.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
6.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
6.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
6.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
6.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
6.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
6.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
6.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
6.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
6.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
6.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
6.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
6.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
6.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
6.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
6.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
6.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
6.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
6.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
6.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
6.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
6.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
6.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
6.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
6.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
5.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
5.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
5.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
5.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
5.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
5.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
5.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
5.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
5.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
5.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
5.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
5.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
5.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
5.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
5.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
5.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
4.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
4.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
4.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
4.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
4.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
4.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
4.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
4.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
4.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
4.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
4.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
4.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
4.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
4.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
4.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
4.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
3.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
3.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
3.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
3.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
3.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
3.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
3.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
3.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
3.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
3.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
3.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
3.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
3.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
3.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
3.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
3.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
3.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
3.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
3.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
3.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
3.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
3.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
3.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
3.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
3.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
2.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
2.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
2.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
2.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
2.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
2.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
2.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
2.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
2.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
2.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
2.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
2.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
2.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
2.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
2.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
1.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
1.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
1.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
1.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
1.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
1.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
1.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
1.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
1.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
0.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
