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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
APOC3 is validated prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10110.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
48256.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
43870.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
40674.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
37360.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
33246.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
32734.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
32490.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
32364.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
32239.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
30453.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
30060.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
29213.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
29104.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
28480.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
27325.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
27273.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
27220.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
27155.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
26622.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
26386.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
25630.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
24989.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
24511.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
24343.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
24079.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
23770.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
23701.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
23601.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
23515.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
22852.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
22436.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
22290.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
22035.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
21915.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
21467.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
21199.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
20816.7
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
20765.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
20685.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
20605.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
20094.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
20001.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
19989.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
19697.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
19161.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
19023.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
18800.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
18528.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
18522.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
18219.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
18105.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
17803.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
17754.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
17723.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
17693.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
17595.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
17470.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
17281.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
17192.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
17168.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
17138.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
17042.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
16633.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
16482.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
16402.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
16243.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
16052.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
15668.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
15630.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
15471.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
15464.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
15397.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
15346.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
15328.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
15268.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
15185.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
15181.9
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
15112.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
14948.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
14939.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
14815.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
14813.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
14666.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
14532.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
14358.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
14330.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
14174.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
14027.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
13997.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
13994.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
13950.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
13935.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
13770.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
13585.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
13553.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
13504.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
13390.4
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
13332.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
13322.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
13306.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
13100.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
12866.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
12853.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
12851.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
12674.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
12637.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
12627.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
12611.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
12610.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
12493.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
12353.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
12321.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
12278.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
12272.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
12242.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
12159.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
12027.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
12013.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
11925.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
11775.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
11719.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
11683.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
11324.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
11301.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
11234.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
11169.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
11163.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
11141.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
10971.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
10950.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
10944.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
10826.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
10791.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
10777.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
10751.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
10712.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
10683.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
10644.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
10612.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
10575.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
10569.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
10551.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
10475.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
10437.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
10420.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
10370.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
10343.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
10320.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
10314.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
10296.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
10262.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
10261.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
10220.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
10209.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
10097.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
10064.8
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
10048.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
10038.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
9935.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
9914.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
9816.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
9709.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
9642.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
9613.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
9465.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
9462.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
9343.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
9293.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
9170.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
9169.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
9100.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
9093.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
9087.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
9061.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
9034.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
8871.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
8789.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
8748.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
8645.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
8623.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
8621.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
8575.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
8561.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
8533.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
8509.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
8507.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
8400.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
8390.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
8383.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
8134.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
8123.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
8099.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
8017.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
7863.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
7859.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
7858.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
7855.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
7806.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
7690.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
7677.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
7613.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
7554.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
7551.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
7534.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
7492.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
7482.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
7473.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
7398.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
7377.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
7315.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
7272.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
7204.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
7165.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
7150.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
7109.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
7074.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
6870.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
6712.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
6542.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
6460.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
6376.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
6242.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
6046.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
6040.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
5991.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
5926.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
5747.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
5727.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
5714.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
5694.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
5674.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
5672.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
5665.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
5661.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
5554.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
5539.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
5498.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
5497.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
5451.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
5446.9
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
5433.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
5422.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
5405.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
5384.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
5346.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
5323.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
5308.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
5204.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
5164.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
5159.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
5130.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
5052.1
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
4759.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
4755.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
4751.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
4641.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
4639.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
4614.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
4534.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
4529.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
4521.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
4503.6
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
4472.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
4425.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
4352.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
4321.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
4309.9
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
4299.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
4289.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
4237.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
4180.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
4140.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
4118.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
4059.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
3998.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
3954.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
3865.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
3858.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
3753.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
3728.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
3706.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
3646.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
3645.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
3631.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
3610.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
3581.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
3579.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
3533.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
3515.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
3499.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
3467.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3441.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
3419.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
3217.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
3205.1
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
3172.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
3075.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
3023.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
2881.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
2760.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
2733.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
2663.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2425.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
2423.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
2421.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
2344.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
2281.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
2281.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
2090.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
2046.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
2033.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
2001.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1950.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
1934.3
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
1929.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
1836.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
1822.5
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
1626.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
1614.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
1604.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
1547.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
1534.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
1515.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1437.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
1394.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
1362.6
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
1268.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
1237.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
1203.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
1148.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
1055.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
992.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
978.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
967.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
877.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
852.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
816.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
797.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
571.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
563.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
495.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
484.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
475.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
412.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
403.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
388.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
380.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
275.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
121.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
38.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
29.9
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
19.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
17.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
17.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
16.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
15.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
12.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
7.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
6.4
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
5.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
4.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
APOC3 is validated prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6957.5
Number of samples
231
Samples
Sample
Description
TPM
DO23532
0 years, female, NA, stage:1, alive, 960 days
53138.9
DO45125
0 years, male, NA, stage:3, alive, 1680 days
41617.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
40363.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
33505.9
DO45101
0 years, male, NA, stage:2, alive, 1680 days
29659.3
DO48674
0 years, male, NA, stage:2, alive, 1260 days
28058.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
25640.9
DO45167
0 years, male, NA, stage:2, dead, 1440 days
25455.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
23944.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
23641.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
22616.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
22251.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
19856.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
19796.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
19680.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
18650.2
DO45096
0 years, male, NA, stage:2, dead, 1290 days
17614.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
17025.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
15678.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
15567.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
15430.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
15370.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
15350.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
14822.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
14380.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
14335.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
14274.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
13872.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
13382.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
13277.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
12853.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
12800.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
12415.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
12106.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
12075.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
12011.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
11391.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
11305.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
11140.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
10979.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
10889.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
10887.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
10748.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
10714.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
10570.6
DO45153
0 years, female, NA, stage:2, alive, 1380 days
10491.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
10394.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
10236.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
10184.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
10105.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
9588.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
9449.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
9425.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
9406.6
DO23508
0 years, female, NA, stage:2, alive, 390 days
9346.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
9326.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
9081.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
9076.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
9061.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
9043.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
9017.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
8978.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
8789.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
8670.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
8654.5
DO50776
0 years, male, NA, stage:1, alive, 690 days
8649.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
8427.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
8224.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
8115.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
7954.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
7881.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
7838.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
7835.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
7656.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
7654.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
7577.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
7408.4
DO45207
0 years, male, NA, stage:1, alive, 1050 days
7405.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
7394.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
7297.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
7220.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
7208.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
7029.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
7016.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
7003.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
6896.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
6885.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
6763.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
6756.1
DO23515
0 years, male, NA, stage:2, alive, 1230 days
6563.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
6531.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
6522.4
DO45173
0 years, male, NA, stage:3, alive, 1170 days
6500.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
6395.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
6309.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
6191.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
6098.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
6073.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
6063.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
6024.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
5984.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
5962.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
5888.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
5881.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
5806.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
5602.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
5585.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
5575.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
5542.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
5537.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
5522.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
5513.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
5475.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
5426.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
5344.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
5341.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
5237.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
5231.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
5171.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
5164.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
5084.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
5028.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
4995.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
4958.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
4933.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
4896.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
4821.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
4796.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
4695.6
DO48693
0 years, male, NA, stage:2, alive, 900 days
4674.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
4665.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
4561.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
4527.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
4518.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
4419.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
4383.8
DO227801
0 years, female, NA, stage:1, alive, 660 days
4203.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
4137.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
4080.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
4004.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
3829.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
3596.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
3471.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
3420.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
3365.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
3323.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
3315.2
DO45119
0 years, male, NA, stage:3, dead, 510 days
3284.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
3240.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
3085.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
2990.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
2925.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
2885.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
2867.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
2793.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
2697.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
2695.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
2680.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
2678.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
2629.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
2597.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
2580.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
2463.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
2395.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
2365.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
2356.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
2305.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
2284.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
2247.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
2179.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
2142.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
2137.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
2106.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
2105.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
2081.7
DO45155
0 years, male, NA, stage:2, alive, 2160 days
1997.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
1906.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
1885.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
1880.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
1835.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
1782.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
1690.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
1662.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
1560.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
1525.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
1456.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
1403.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
1385.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
1371.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
1303.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
1186.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
1138.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
1038.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
993.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
926.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
832.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
826.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
794.0
DO45145
0 years, male, NA, stage:3, dead, 60 days
766.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
758.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
657.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
640.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
596.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
540.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
436.4
DO45301
0 years, male, NA, stage:2, dead, 1440 days
415.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
405.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
303.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
262.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
223.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
160.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
73.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
66.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
61.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
49.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
40.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
29.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
28.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
27.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
20.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
18.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
17.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
11.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
7.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
6.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
6.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
6.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
5.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
2.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
1.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
1.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
777
Tumor
1.9
863
Tumor
1.8
615
Tumor
1.4
647
Tumor
1.3
741
Tumor
1.3
435
Tumor
1.3
365
Tumor
1.2
423
Tumor
1.1
128
Normal
1.0
411
Tumor
1.0
465
Tumor
0.9
755
Tumor
0.9
393
Tumor
0.8
1027
Tumor
0.8
171
Tumor
0.7
147
Tumor
0.7
445
Tumor
0.7
616
Normal
0.7
327
Tumor
0.7
422
Normal
0.7
127
Tumor
0.7
461
Tumor
0.6
227
Tumor
0.6
564
Normal
0.6
627
Tumor
0.6
342
Normal
0.6
563
Tumor
0.6
341
Tumor
0.6
353
Tumor
0.6
742
Normal
0.6
222
Normal
0.6
141
Tumor
0.5
462
Normal
0.5
618
Normal
0.5
628
Normal
0.5
428
Normal
0.5
723
Tumor
0.5
356
Normal
0.5
314
Normal
0.5
882
Normal
0.5
361
Tumor
0.5
466
Normal
0.5
728
Normal
0.5
172
Normal
0.5
426
Normal
0.4
357
Tumor
0.4
738
Normal
0.4
436
Normal
0.4
464
Normal
0.4
277
Tumor
0.4
482
Normal
0.4
432
Normal
0.4
257
Tumor
0.4
354
Normal
0.4
358
Normal
0.4
572
Normal
0.4
515
Tumor
0.4
452
Normal
0.4
866
Normal
0.3
196
Normal
0.3
162
Normal
0.3
214
Normal
0.3
714
Normal
0.3
424
Normal
0.3
635
Tumor
0.3
878
Normal
0.3
161
Tumor
0.3
388
Normal
0.3
636
Normal
0.3
746
Normal
0.3
722
Normal
0.3
868
Normal
0.3
648
Normal
0.2
186
Normal
0.2
786
Normal
0.2
568
Normal
0.2
745
Tumor
0.2
913
Tumor
0.2
137
Tumor
0.2
185
Tumor
0.2
138
Normal
0.2
394
Normal
0.2
818
Normal
0.2
298
Normal
0.2
862
Normal
0.2
884
Normal
0.2
145
Tumor
0.2
744
Normal
0.2
352
Normal
0.2
136
Normal
0.2
672
Normal
0.2
874
Normal
0.2
431
Tumor
0.2
664
Normal
0.1
187
Tumor
0.1
468
Normal
0.1
864
Normal
0.1
571
Tumor
0.1
641
Tumor
0.1
914
Normal
0.1
111
Normal
0.1
278
Normal
0.1
414
Normal
0.1
921
Tumor
0.1
332
Normal
0.1
481
Tumor
0.1
416
Normal
0.1
376
Normal
0.1
114
Normal
0.1
816
Normal
0.1
1045
Tumor
0.1
982
Normal
0.1
231
Tumor
0.1
824
Normal
0.1
873
Tumor
0.1
1016
Normal
0.1
662
Normal
0.1
224
Normal
0.1
258
Normal
0.0
132
Normal
0.0
1022
Normal
0.0
392
Normal
0.0
642
Normal
0.0
146
Normal
0.0
513
Tumor
0.0
727
Tumor
0.0
148
Normal
0.0
867
Tumor
0.0
267
Tumor
0.0
188
Normal
0.0
362
Normal
0.0
126
Normal
0.0
558
Normal
0.0
232
Normal
0.0
666
Normal
0.0
698
Normal
0.0
663
Tumor
0.0
911
Tumor
0.0
142
Normal
0.0
487
Tumor
0.0
713
Tumor
0.0
851
Tumor
0.0
574
Normal
0.0
218
Normal
0.0
858
Normal
0.0
195
Tumor
0.0
366
Normal
-0.1
912
Normal
-0.1
328
Normal
-0.1
446
Normal
-0.1
312
Normal
-0.1
412
Normal
-0.1
123
Tumor
-0.1
272
Normal
-0.1
877
Tumor
-0.1
228
Normal
-0.1
271
Tumor
-0.1
721
Tumor
-0.1
368
Normal
-0.1
456
Normal
-0.1
756
Normal
-0.1
716
Normal
-0.1
494
Normal
-0.2
386
Normal
-0.2
286
Normal
-0.2
785
Tumor
-0.2
191
Tumor
-0.2
915
Tumor
-0.2
192
Normal
-0.2
124
Normal
-0.2
344
Normal
-0.2
1046
Normal
-0.2
448
Normal
-0.2
1032
Normal
-0.2
981
Tumor
-0.2
865
Tumor
-0.2
433
Tumor
-0.2
434
Normal
-0.2
474
Normal
-0.2
617
Tumor
-0.2
313
Tumor
-0.2
488
Normal
-0.2
1043
Tumor
-0.2
396
Normal
-0.2
472
Normal
-0.2
297
Tumor
-0.3
268
Normal
-0.3
384
Normal
-0.3
363
Tumor
-0.3
262
Normal
-0.3
1044
Normal
-0.3
778
Normal
-0.3
484
Normal
-0.3
221
Tumor
-0.3
1015
Tumor
-0.3
444
Normal
-0.3
984
Normal
-0.3
737
Tumor
-0.3
451
Tumor
-0.3
977
Tumor
-0.3
421
Tumor
-0.3
881
Tumor
-0.3
284
Normal
-0.3
528
Normal
-0.4
415
Tumor
-0.4
261
Tumor
-0.4
861
Tumor
-0.4
1026
Normal
-0.4
217
Tumor
-0.4
483
Tumor
-0.4
391
Tumor
-0.4
364
Normal
-0.4
883
Tumor
-0.4
1042
Normal
-0.4
427
Tumor
-0.4
686
Normal
-0.4
852
Normal
-0.4
956
Normal
-0.5
955
Tumor
-0.5
1025
Tumor
-0.5
112
Tumor
-0.5
557
Tumor
-0.5
1028
Normal
-0.5
534
Normal
-0.6
387
Tumor
-0.6
1014
Normal
-0.6
113
Tumor
-0.6
665
Tumor
-0.6
857
Tumor
-0.6
938
Normal
-0.6
498
Normal
-0.6
477
Tumor
-0.6
724
Normal
-0.6
455
Tumor
-0.6
1013
Tumor
-0.6
968
Normal
-0.6
695
Tumor
-0.7
976
Normal
-0.7
922
Normal
-0.7
978
Normal
-0.7
696
Normal
-0.7
514
Normal
-0.7
213
Tumor
-0.7
492
Normal
-0.7
523
Tumor
-0.7
1021
Tumor
-0.7
471
Tumor
-0.8
518
Normal
-0.8
1041
Tumor
-0.8
954
Normal
-0.8
425
Tumor
-0.8
952
Normal
-0.8
478
Normal
-0.8
964
Normal
-0.8
924
Normal
-0.8
526
Normal
-0.8
817
Tumor
-0.8
546
Normal
-0.9
516
Normal
-0.9
918
Normal
-0.9
1031
Tumor
-0.9
375
Tumor
-0.9
926
Normal
-1.0
351
Tumor
-1.0
395
Tumor
-1.0
958
Normal
-1.0
413
Tumor
-1.0
212
Normal
-1.0
533
Tumor
-1.0
573
Tumor
-1.0
447
Tumor
-1.0
813
Tumor
-1.0
343
Tumor
-1.0
443
Tumor
-1.0
223
Tumor
-1.0
463
Tumor
-1.0
814
Normal
-1.0
473
Tumor
-1.0
524
Normal
-1.1
925
Tumor
-1.1
567
Tumor
-1.1
554
Normal
-1.1
966
Normal
-1.1
467
Tumor
-1.1
553
Tumor
-1.1
944
Normal
-1.1
517
Tumor
-1.1
135
Tumor
-1.1
538
Normal
-1.2
493
Tumor
-1.2
916
Normal
-1.2
715
Tumor
-1.2
383
Tumor
-1.2
525
Tumor
-1.2
953
Tumor
-1.2
125
Tumor
-1.3
937
Tumor
-1.3
975
Tumor
-1.3
671
Tumor
-1.3
497
Tumor
-1.3
963
Tumor
-1.3
367
Tumor
-1.3
967
Tumor
-1.3
355
Tumor
-1.4
823
Tumor
-1.4
527
Tumor
-1.4
957
Tumor
-1.5
331
Tumor
-1.5
491
Tumor
-1.5
923
Tumor
-1.6
685
Tumor
-1.6
743
Tumor
-1.6
385
Tumor
-1.6
943
Tumor
-1.6
537
Tumor
-1.7
815
Tumor
-1.8
951
Tumor
-1.8
131
Tumor
-1.9
311
Tumor
-1.9
536
Normal
-1.9
697
Tumor
-2.0
285
Tumor
-2.0
965
Tumor
-2.0
917
Tumor
-2.1
983
Tumor
-2.2
545
Tumor
-2.2
283
Tumor
-2.3
535
Tumor
-2.5
661
Tumor
-2.5
211
Tumor
-2.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.