HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:13.7 nTPM
HPA Brain:27.7 nTPM
GTEx:13.7 nTPM
FANTOM5:25.4 Scaled Tags Per Million
Pig:22.0 nTPM
Mouse:16.2 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056760Antibody HPA059294
Glial cells Not detectedLow
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 27.7
Sample id Sample description nTPM
Hippocampus
nTPM: 26.3
2529 Female, age 94, left hemisphere 30.7
1898 Male, age 80, left hemisphere 27.3
2621 Female, age 67, right hemisphere 26.4
2148 Female, age 91, left hemisphere 25.8
1855 Male, age 76, left hemisphere 24.5
1911 Female, age 85, right hemisphere 22.9
Dentate gyrus
nTPM: 25.7
2530 Female, age 94, left hemisphere 33.5
2531 Female, age 67, both hemispheres 29.9
2246 Female, age 85, both hemispheres 25.8
2010 Male, age 76, both hemispheres 22.5
2528 Male, age 74, both hemispheres 22.0
1927 Female, age 91, both hemispheres 20.4
Entorhinal gyrus
nTPM: 27.7
2764 Male, age 80, right hemisphere 33.3
1787 Male, age 76, left hemisphere 28.7
2613 Female, age 94, left hemisphere 28.3
2117 Female, age 91, right hemisphere 26.7
2686 Male, age 75, right hemisphere 26.2
1938 Female, age 85, left hemisphere 22.9
Hippocampus, CA1
nTPM: 23.6
2045 Male, age 76, both hemispheres 28.7
1873 Female, age 85, both hemispheres 28.0
2527 Male, age 74, both hemispheres 21.3
2749 Male, age 80, left hemisphere 21.2
2082 Female, age 91, right hemisphere 18.8
Hippocampus, CA2
nTPM: 25.3
2437 Female, age 94, left hemisphere 32.6
1963 Male, age 80, left hemisphere 31.8
1892 Male, age 76, both hemispheres 29.6
2113 Female, age 91, right hemisphere 21.8
2249 Male, age 74, both hemispheres 18.4
1940 Female, age 85, left hemisphere 17.5
Hippocampus, CA3
nTPM: 24.1
1891 Female, age 85, both hemispheres 27.5
1867 Male, age 76, both hemispheres 25.6
2620 Female, age 94, left hemisphere 25.4
2861 Female, age 67, both hemispheres 25.0
2137 Male, age 80, left hemisphere 21.8
2436 Male, age 74, both hemispheres 19.0
Parahippocampal cortex
nTPM: 26.3
2532 Female, age 72, left hemisphere 35.6
2245 Female, age 91, both hemispheres 29.1
2018 Male, age 76, both hemispheres 26.4
1850 Male, age 80, both hemispheres 26.2
2692 Male, age 74, both hemispheres 25.1
1990 Female, age 91, right hemisphere 25.0
2622 Female, age 67, right hemisphere 24.6
2250 Female, age 67, right hemisphere 24.4
1933 Female, age 85, both hemispheres 23.9
2693 Female, age 94, both hemispheres 22.3
Perirhinal gyrus
nTPM: 26.5
2848 Male, age 76, right hemisphere 28.9
1794 Male, age 80, right hemisphere 27.4
1841 Female, age 85, right hemisphere 27.3
2521 Female, age 94, right hemisphere 24.6
1847 Female, age 91, left hemisphere 24.2
Subiculum
nTPM: 27.5
2438 Female, age 94, left hemisphere 39.3
1901 Male, age 80, both hemispheres 29.0
1977 Female, age 85, both hemispheres 27.8
2619 Male, age 74, both hemispheres 26.8
2042 Male, age 76, both hemispheres 24.1
2729 Female, age 91, right hemisphere 18.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 13.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.7
Samples: 197

Max nTPM: 30.8
Min nTPM: 2.4
Std nTPM: 5.5
Median nTPM: 12.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 30.8
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 30.8
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 30.5
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 30.5
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 30.3
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 27.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 26.8
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 26.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 25.0
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 24.5
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 24.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 25.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.4
FF:10169-103B7 60 years, female 27.0
FF:10153-102I9 76 years, female 23.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 22.0
Pig sample Sample description nTPM
Subiculum
nTPM: 20.7
Samples: 4

Max nTPM: 28.5
Min nTPM: 16.8
Sample A Female 28.5
Sample B Female 19.8
Sample C Male 17.7
Sample D Male 16.8
Dorsal hippocampus
nTPM: 19.9
Samples: 4

Max nTPM: 22.9
Min nTPM: 17.6
Sample A Female 22.9
Sample B Female 21.1
Sample C Male 18.0
Sample D Male 17.6
Entorhinal cortex
nTPM: 22.0
Samples: 4

Max nTPM: 25.2
Min nTPM: 19.3
Sample A Female 25.2
Sample B Female 20.6
Sample C Male 22.9
Sample D Male 19.3
Ventral hippocampus
nTPM: 20.3
Samples: 4

Max nTPM: 22.6
Min nTPM: 17.4
Sample A Female 20.3
Sample B Female 17.4
Sample C Male 22.6
Sample D Male 20.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 16.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.2
Samples: 4

Max nTPM: 17.9
Min nTPM: 14.9
Sample A Male 16.6
Sample B Male 17.9
Sample C Female 15.3
Sample D Female 14.9
Hippocampal formation
nTPM: 15.2
Samples: 4

Max nTPM: 17.9
Min nTPM: 13.1
Sample A Male 15.3
Sample B Male 17.9
Sample C Female 14.4
Sample D Female 13.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
69671642 Antisense, RP_050428_02_A01, Mouse strain C57BL/6J (56 days, male) 0.7

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