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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VWA5A is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
28.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
24.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
22.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
19.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
19.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
13.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
13.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
12.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
11.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
11.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
11.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
10.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
10.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
10.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
10.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
9.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
9.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
9.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
9.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
9.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
7.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
7.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
7.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
7.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
7.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
6.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
6.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
6.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
6.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
5.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
5.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
5.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
5.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
5.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
5.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
5.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
5.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
4.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
3.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
3.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
3.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
3.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
3.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
3.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
3.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
3.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
3.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
3.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
3.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
2.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
2.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
2.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
2.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
2.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
2.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
2.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
1.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
1.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
1.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VWA5A is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
38.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
33.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
30.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
29.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
29.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
28.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
27.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
27.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
27.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
27.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
27.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
27.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
26.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
25.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
24.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
24.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
24.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
23.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
23.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
22.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
22.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
22.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
22.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
22.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
21.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
21.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
21.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
21.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
20.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
20.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
20.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
20.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
20.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
20.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
19.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
19.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
19.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
19.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
19.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
18.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
18.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
18.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
17.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
17.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
17.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
17.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
17.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
17.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
17.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
17.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
17.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
17.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
16.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
16.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
16.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
16.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
16.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
16.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
16.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
16.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
16.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
16.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
16.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
16.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
16.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
16.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
16.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
16.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
16.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
15.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
15.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
15.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
15.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
15.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
15.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
15.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
15.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
15.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
15.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
15.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
15.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
15.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
15.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
15.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
15.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
15.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
15.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
15.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
14.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
14.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
14.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
14.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
14.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
14.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
14.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
14.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
14.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
14.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
14.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
14.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
14.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
14.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
14.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
14.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
14.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
14.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
14.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
13.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
13.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
13.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
13.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
13.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
13.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
13.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
13.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
13.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
13.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
13.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
13.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
13.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
13.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
13.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
13.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
13.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
13.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
13.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
13.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
13.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
13.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
13.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
12.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
12.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
12.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
12.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
12.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
12.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
12.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
12.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
12.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
12.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
12.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
12.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
12.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
12.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
12.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
12.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
12.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
12.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
12.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
12.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
12.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
12.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
12.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
12.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
12.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
12.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
11.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
11.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
11.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
11.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
11.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
11.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
11.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
11.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
11.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
11.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
11.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
11.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
11.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
11.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
11.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
11.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
11.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
11.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
11.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
11.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
11.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
11.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
11.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
11.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
11.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
11.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
10.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
10.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
10.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
10.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
10.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
10.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
10.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
10.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
10.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
10.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
10.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
10.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
10.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
10.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
10.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
10.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
10.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
10.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
10.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
10.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
10.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
10.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
10.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
10.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
10.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
10.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
10.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
10.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
10.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
10.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
10.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
10.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
10.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
10.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
10.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
9.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
9.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
9.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
9.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
9.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
9.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
9.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
9.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
9.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
9.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
9.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
9.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
9.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
9.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
9.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
9.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
9.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
9.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
9.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
9.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
9.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
9.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
9.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
9.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
9.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
9.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
9.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
9.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
9.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
9.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
9.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
9.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
9.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
9.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
9.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
9.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
9.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
9.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
9.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
8.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
8.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
8.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
8.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
8.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
8.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
8.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
8.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
8.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
8.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
8.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
8.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
8.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
8.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
8.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
8.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
8.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
8.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
8.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
8.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
8.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
8.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
8.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
8.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
8.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
8.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
8.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
8.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
8.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
8.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
8.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
8.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
8.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
8.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
8.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
8.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
8.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
8.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
8.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
8.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
8.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
8.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
8.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
7.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
7.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
7.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
7.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
7.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
7.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
7.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
7.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
7.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
7.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
7.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
7.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
7.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
7.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
7.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
7.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
7.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
7.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
7.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
7.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
7.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
7.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
7.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
7.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
7.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
7.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
7.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
7.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
7.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
7.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
7.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
7.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
7.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
7.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
7.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
7.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
7.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
6.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
6.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
6.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
6.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
6.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
6.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
6.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
6.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
6.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
6.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
6.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
6.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
6.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
6.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
6.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
6.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
6.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
6.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
6.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
6.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
6.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
6.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
6.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
6.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
6.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
6.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
6.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
6.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
6.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
6.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
6.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
6.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
6.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
6.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
6.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
5.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
5.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
5.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
5.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
5.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
5.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
5.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
5.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
5.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
5.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
5.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
5.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
5.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
5.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
5.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
5.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
5.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
5.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
5.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
5.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
5.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
5.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
5.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
5.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
5.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
5.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
5.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
5.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
5.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
5.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
5.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
5.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
4.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
4.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
4.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
4.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
4.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
4.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
4.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
4.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
4.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
4.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
4.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
4.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
4.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
4.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
4.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
4.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
4.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
4.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
4.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
4.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
4.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
4.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
4.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
4.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
4.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
4.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
4.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
4.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
4.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
4.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
4.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
4.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
4.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
4.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
4.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
4.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
4.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
4.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
4.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
4.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
4.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
4.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
4.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
4.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
4.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
4.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
3.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
3.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
3.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
3.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
3.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
3.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
3.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
3.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
3.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
3.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
3.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
3.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
3.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
3.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
3.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
3.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
3.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
3.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
2.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
2.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
2.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
2.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
2.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
2.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
2.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
2.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
2.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
1.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
1.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
1.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
1.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
1.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
1.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
1.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
1.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
1.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VWA5A is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
31.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
27.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
26.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
26.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
25.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
22.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
22.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
22.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
21.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
21.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
21.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
20.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
20.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
20.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
20.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
19.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
19.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
19.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
19.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
18.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
18.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
17.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
17.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
17.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
17.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
16.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
16.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
16.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
16.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
16.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
16.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
15.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
15.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
15.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
15.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
14.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
14.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
14.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
13.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
13.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
13.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
13.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
13.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
13.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
13.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
13.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
13.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
12.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
12.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
12.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
12.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
12.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
12.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
12.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
12.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
12.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
11.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
11.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
11.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
11.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
11.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
11.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
11.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
10.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
10.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
10.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
10.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
10.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
10.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
10.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
9.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
9.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
9.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
8.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
8.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
8.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
8.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
8.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
7.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
7.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
7.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
7.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
7.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
6.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
6.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
6.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
5.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
5.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
4.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
4.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
4.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
3.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
2.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
2.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
1.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
VWA5A is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
156.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
69.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
52.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
48.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
48.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
46.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
44.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
42.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
42.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
41.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
40.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
40.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
40.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
39.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
39.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
39.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
39.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
39.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
38.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
38.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
37.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
37.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
37.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
37.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
36.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
36.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
35.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
35.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
35.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
34.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
34.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
34.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
33.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
32.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
32.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
32.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
32.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
32.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
32.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
32.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
32.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
31.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
31.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
31.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
30.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
30.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
30.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
30.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
30.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
30.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
29.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
29.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
29.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
29.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
29.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
29.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
29.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
29.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
29.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
28.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
28.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
28.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
28.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
28.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
28.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
28.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
28.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
28.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
28.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
28.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
28.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
28.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
28.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
27.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
27.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
27.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
27.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
27.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
27.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
27.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
27.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
27.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
27.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
26.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
26.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
26.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
26.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
26.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
26.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
25.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
25.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
25.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
25.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
25.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
25.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
25.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
24.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
24.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
24.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
24.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
24.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
24.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
24.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
24.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
24.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
24.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
24.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
24.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
24.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
24.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
23.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
23.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
23.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
23.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
23.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
23.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
23.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
23.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
23.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
22.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
22.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
22.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
22.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
22.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
22.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
22.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
22.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
21.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
21.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
21.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
21.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
21.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
21.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
21.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
21.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
20.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
20.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
20.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
20.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
20.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
20.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
20.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
19.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
19.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
19.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
19.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
19.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
19.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
19.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
19.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
19.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
19.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
19.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
18.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
18.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
18.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
18.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
18.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
18.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
18.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
18.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
18.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
17.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
17.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
17.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
17.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
17.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
17.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
17.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
17.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
17.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
16.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
16.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
16.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
16.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
15.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
15.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
15.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
15.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
15.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
15.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
15.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
15.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
15.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
14.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
14.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
14.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
14.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
14.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
14.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
14.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
14.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
14.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
13.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
13.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
13.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
13.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
13.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
13.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
13.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
13.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
13.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
13.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
12.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
12.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
12.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
12.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
12.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
12.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
11.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
11.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
11.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
11.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
11.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
11.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
11.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
11.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
11.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
11.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
11.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
11.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
11.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
11.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
11.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
10.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
10.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
10.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
10.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
10.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
10.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
10.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
10.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
10.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
9.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
9.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
9.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
9.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
9.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
9.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
9.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
8.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
8.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
8.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
8.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
8.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
8.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
8.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
8.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
8.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
8.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
7.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
7.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
7.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
6.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
6.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
6.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
5.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
5.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
5.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
5.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
5.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
5.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
5.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
4.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
4.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
3.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
2.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
1.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
1.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
1.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
1.1
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0084590001
Normal
0.9
CPT0075170001
Normal
0.9
CPT0078800003
Tumor
0.8
CPT0011410003
Tumor
0.8
CPT0075570001
Normal
0.7
CPT0069190001
Normal
0.7
CPT0000640003
Tumor
0.7
CPT0092190003
Normal
0.7
CPT0086950003
Tumor
0.6
CPT0002350011
Tumor
0.6
CPT0079510001
Normal
0.6
CPT0012280003
Tumor
0.6
CPT0017450001
Normal
0.6
CPT0077320001
Normal
0.6
CPT0001190001
Normal
0.6
CPT0088480003
Tumor
0.6
CPT0001270001
Normal
0.6
CPT0010120001
Normal
0.5
CPT0025050003
Tumor
0.5
CPT0088550004
Tumor
0.5
CPT0000660001
Normal
0.5
CPT0023350003
Tumor
0.5
CPT0012640003
Normal
0.5
CPT0001350001
Normal
0.5
CPT0076350001
Normal
0.4
CPT0063640001
Normal
0.4
CPT0012290003
Normal
0.4
CPT0079230003
Tumor
0.4
CPT0018250001
Normal
0.4
CPT0014160003
Tumor
0.4
CPT0020120003
Tumor
0.4
CPT0009020003
Normal
0.4
CPT0001180009
Tumor
0.3
CPT0006530001
Normal
0.3
CPT0017410003
Tumor
0.3
CPT0002270011
Tumor
0.3
CPT0066520001
Normal
0.3
CPT0079300001
Normal
0.3
CPT0089040001
Normal
0.3
CPT0014130001
Normal
0.3
CPT0024670003
Tumor
0.3
CPT0025230003
Tumor
0.2
CPT0013790003
Normal
0.2
CPT0086820003
Tumor
0.2
CPT0012920003
Normal
0.2
CPT0065820001
Normal
0.2
CPT0025060001
Normal
0.2
CPT0069000003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0001340003
Tumor
0.2
CPT0000890001
Normal
0.2
CPT0082010001
Normal
0.2
CPT0009060003
Tumor
0.2
CPT0063330001
Normal
0.2
CPT0017850003
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0001230001
Normal
0.2
CPT0088970003
Tumor
0.2
CPT0088570001
Normal
0.2
CPT0092800003
Normal
0.2
CPT0084560003
Tumor
0.2
CPT0086830003
Normal
0.1
CPT0088920001
Normal
0.1
CPT0009080003
Normal
0.1
CPT0012570003
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0086970003
Normal
0.1
CPT0088710001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0079430001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0001510001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0078940001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0066480003
Tumor
0.1
CPT0088500001
Normal
0.1
CPT0007870001
Normal
0.1
CPT0088640003
Normal
0.1
CPT0025170003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0000790001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0066430001
Normal
0.0
CPT0025290003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0015910003
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0086370003
Normal
0.0
CPT0023360001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0076330003
Tumor
0.0
CPT0077310003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0069010001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0001500009
Tumor
-0.1
CPT0012550003
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0012770003
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0065930003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0079380003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0012670003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0078990003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0065870003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0078510003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0092290003
Tumor
-0.1
CPT0086030003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0075560003
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0065450001
Normal
-0.2
CPT0006950001
Normal
-0.2
CPT0081990003
Tumor
-0.2
CPT0021240003
Tumor
-0.2
CPT0064370003
Tumor
-0.2
CPT0014450004
Tumor
-0.2
CPT0010170001
Normal
-0.2
CPT0012180003
Tumor
-0.2
CPT0025350003
Tumor
-0.2
CPT0025880003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0088690003
Tumor
-0.3
CPT0086870003
Tumor
-0.3
CPT0006440003
Tumor
-0.3
CPT0012080003
Tumor
-0.3
CPT0078830003
Tumor
-0.3
CPT0025110003
Tumor
-0.3
CPT0000870016
Tumor
-0.3
CPT0088630003
Tumor
-0.3
CPT0081880003
Tumor
-0.3
CPT0063630003
Tumor
-0.3
CPT0079270003
Tumor
-0.3
CPT0071150004
Tumor
-0.3
CPT0079410003
Tumor
-0.4
CPT0006630003
Tumor
-0.4
CPT0001540009
Tumor
-0.4
CPT0085670003
Tumor
-0.4
CPT0066470004
Tumor
-0.4
CPT0075130003
Tumor
-0.4
CPT0078930003
Tumor
-0.5
CPT0065810003
Tumor
-0.5
CPT0023690003
Tumor
-0.5
CPT0010160003
Tumor
-0.5
CPT0010110003
Tumor
-0.5
CPT0009000003
Tumor
-0.5
CPT0025580004
Tumor
-0.5
CPT0000780007
Tumor
-0.6
CPT0012900004
Tumor
-0.6
CPT0015730003
Tumor
-0.7
CPT0089460004
Tumor
-0.7
CPT0078660003
Tumor
-0.8
CPT0077490003
Tumor
-0.8
CPT0079180003
Tumor
-0.8
CPT0007860003
Tumor
-0.8
CPT0001260009
Tumor
-0.8
CPT0014370004
Tumor
-0.9
CPT0007320003
Tumor
-1.0
CPT0012370003
Tumor
-1.0
CPT0077110003
Tumor
-1.4
CPT0026410003
Tumor
-1.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.