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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZBTB16 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
4.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
47.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
35.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
32.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
25.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
24.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
23.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
23.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
22.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
21.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
21.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
20.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
19.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
18.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
18.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
18.0
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
17.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
17.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
16.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
16.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
15.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
14.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
14.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
14.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
14.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
14.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
14.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
14.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
14.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
13.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
13.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
13.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
12.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
12.7
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
12.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
12.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
12.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
11.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
11.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
11.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
10.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
10.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
10.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
9.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
9.7
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
9.7
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
9.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
9.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
9.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
9.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
9.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
8.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
8.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
8.6
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
8.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
8.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
8.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
8.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
8.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
7.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
7.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
7.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
7.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
7.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
7.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
7.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
7.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
7.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
7.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
7.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
7.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
7.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
7.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
7.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
7.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
7.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
7.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
6.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
6.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
6.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
6.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
6.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
6.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
6.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
6.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
6.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
6.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
6.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
6.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
6.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
6.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
6.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
6.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
5.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
5.7
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
5.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
5.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
5.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
5.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
5.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
5.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
5.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
5.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
5.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
5.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
5.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
5.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
5.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
5.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
5.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
5.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
5.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
5.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
5.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
5.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
5.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
4.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
4.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
4.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
4.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
4.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
4.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
4.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
4.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
4.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
4.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
4.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
4.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
4.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
4.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
4.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
4.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
4.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
4.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
4.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
4.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
4.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
4.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
4.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
4.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
4.1
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
4.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
4.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
4.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
4.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
4.0
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
3.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
3.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
3.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
3.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
3.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
3.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
3.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
3.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
3.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
3.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
3.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
3.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
3.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
3.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
3.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
3.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
3.6
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
3.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
3.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
3.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
3.5
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
3.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
3.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
3.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
3.3
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
3.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
3.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
3.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
3.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
3.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
3.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
3.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
3.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
3.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
3.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
3.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
3.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
2.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
2.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
2.9
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
2.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
2.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
2.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
2.9
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
2.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
2.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
2.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
2.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
2.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
2.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
2.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
2.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
2.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
2.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
2.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
2.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
2.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
2.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
2.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
2.4
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
2.4
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
2.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
2.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
2.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
2.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
2.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
2.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
2.2
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
2.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
2.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
2.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
2.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
2.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
2.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
2.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
2.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
2.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
2.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
1.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
1.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
1.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
1.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
1.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
1.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
1.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
1.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
1.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
1.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
1.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
1.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
1.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
1.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
1.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
1.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
1.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
1.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
1.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
1.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
1.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
1.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
1.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
1.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
1.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
1.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
1.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
1.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
1.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
1.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
1.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
1.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
1.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
1.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
1.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
1.2
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
1.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
1.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
1.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
1.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
1.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
1.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
1.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
1.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
1.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
1.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
1.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
1.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
0.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
0.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
0.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
0.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.9
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
0.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
0.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
0.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
0.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
0.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
0.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
0.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
0.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
0.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
0.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
0.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
0.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
0.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
0.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
0.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
0.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
0.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
0.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
0.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
0.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
0.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
0.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
0.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
0.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
0.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
0.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
0.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
0.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
0.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
0.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
0.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
0.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
0.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
0.4
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
0.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
0.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
0.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
0.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
0.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
0.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
0.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
0.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
0.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
0.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
0.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
0.3
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
0.3
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
0.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
0.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
0.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
0.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
0.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
0.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
0.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
0.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
0.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
0.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
0.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
0.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
0.1
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
0.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
0.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
0.1
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
0.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
0.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
0.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZBTB16 is potential prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2.7
Number of samples
231
Samples
Sample
Description
TPM
DO50774
0 years, female, NA, stage:2, alive, 720 days
28.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
16.8
DO48746
0 years, male, NA, stage:3, alive, 570 days
15.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
15.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
13.7
DO50802
0 years, male, NA, stage:2, alive, 930 days
12.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
12.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
12.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
11.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
11.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
11.8
DO45235
0 years, female, NA, stage:1, alive, 900 days
11.4
DO45207
0 years, male, NA, stage:1, alive, 1050 days
11.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
10.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
9.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
9.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
9.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
9.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
9.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
8.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
8.6
DO45225
0 years, male, NA, stage:1, alive, 1050 days
8.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
8.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
7.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
7.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
7.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
6.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
6.9
DO50816
0 years, male, NA, stage:2, alive, 390 days
6.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
6.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
5.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
5.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
5.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
5.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
5.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
5.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
4.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
4.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
4.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
4.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
4.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
4.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
4.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
3.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
3.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
3.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
3.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
3.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
3.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
3.6
DO45189
0 years, female, NA, stage:2, alive, 1200 days
3.6
DO48701
0 years, male, NA, stage:2, alive, 780 days
3.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
3.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
3.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
3.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
3.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
3.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
3.2
DO50814
0 years, male, NA, stage:3, alive, 420 days
2.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
2.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
2.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
2.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
2.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
2.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
2.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
2.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
2.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
2.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
2.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
2.5
DO45153
0 years, female, NA, stage:2, alive, 1380 days
2.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
2.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
2.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
2.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
2.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
2.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
2.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
2.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
2.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
2.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
2.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
2.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
2.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
2.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
2.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
2.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
2.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
1.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
1.9
DO45177
0 years, female, NA, stage:3, alive, 1260 days
1.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
1.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
1.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
1.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
1.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
1.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
1.7
DO45094
0 years, male, NA, stage:3, alive, 1650 days
1.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
1.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
1.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
1.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
1.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
1.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
1.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
1.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
1.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
1.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
1.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
1.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
1.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
1.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
1.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
1.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
1.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
1.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
1.3
DO45209
0 years, male, NA, stage:4, alive, 1350 days
1.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
1.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
1.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
1.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
1.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
1.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
1.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
1.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
1.2
DO48672
0 years, male, NA, stage:2, alive, 450 days
1.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
1.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
1.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
1.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
1.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
1.2
DO23528
0 years, female, NA, stage:2, alive, 1020 days
1.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
1.1
DO50844
0 years, male, NA, stage:4, alive, 300 days
1.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
1.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
1.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
1.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
1.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
1.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
1.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
1.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
1.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
1.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
1.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
1.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
1.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
1.0
DO48759
0 years, male, NA, stage:3, alive, 720 days
1.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
0.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
0.9
DO45119
0 years, male, NA, stage:3, dead, 510 days
0.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
0.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
0.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
0.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
0.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
0.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
0.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
0.8
DO23547
0 years, male, NA, stage:1, alive, 1020 days
0.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
0.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
0.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
0.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
0.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
0.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
0.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
0.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
0.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
0.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
0.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
0.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
0.7
DO48700
0 years, female, NA, stage:2, alive, 810 days
0.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
0.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
0.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
0.6
DO48761
0 years, male, NA, stage:2, alive, 870 days
0.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
0.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
0.6
DO45183
0 years, female, NA, stage:2, dead, 570 days
0.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
0.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
0.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
0.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
0.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
0.5
DO45092
0 years, male, NA, stage:4, dead, 1200 days
0.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
0.5
DO23549
0 years, male, NA, stage:3, alive, 990 days
0.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
0.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
0.4
DO45251
0 years, female, NA, stage:2, alive, 900 days
0.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
0.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
0.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
0.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
0.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
0.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
0.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
0.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
0.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
0.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
0.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
0.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
0.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
0.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
0.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
0.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
0.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
0.3
DO50822
0 years, male, NA, stage:2, alive, 510 days
0.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
0.3
DO45205
0 years, female, NA, stage:2, dead, 90 days
0.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
0.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
0.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
0.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
0.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
0.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
0.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
0.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
0.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
0.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
0.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
0.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
0.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
0.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
0.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
0.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
0.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
0.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
0.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
0.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
0.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
0.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
914
Normal
2.7
937
Tumor
1.3
344
Normal
1.2
815
Tumor
1.2
352
Normal
1.1
342
Normal
1.0
744
Normal
0.9
713
Tumor
0.8
393
Tumor
0.7
878
Normal
0.7
358
Normal
0.7
463
Tumor
0.7
517
Tumor
0.7
146
Normal
0.7
955
Tumor
0.6
938
Normal
0.6
311
Tumor
0.6
487
Tumor
0.6
285
Tumor
0.6
944
Normal
0.6
367
Tumor
0.6
513
Tumor
0.6
395
Tumor
0.6
954
Normal
0.6
188
Normal
0.6
277
Tumor
0.6
354
Normal
0.6
571
Tumor
0.5
353
Tumor
0.5
727
Tumor
0.5
425
Tumor
0.5
427
Tumor
0.5
392
Normal
0.5
738
Normal
0.5
413
Tumor
0.5
224
Normal
0.5
444
Normal
0.5
423
Tumor
0.5
341
Tumor
0.5
538
Normal
0.5
863
Tumor
0.5
523
Tumor
0.5
976
Normal
0.5
432
Normal
0.5
866
Normal
0.4
528
Normal
0.4
723
Tumor
0.4
518
Normal
0.4
452
Normal
0.4
814
Normal
0.4
967
Tumor
0.4
396
Normal
0.4
394
Normal
0.4
451
Tumor
0.4
574
Normal
0.4
515
Tumor
0.4
558
Normal
0.4
862
Normal
0.4
742
Normal
0.4
1032
Normal
0.4
864
Normal
0.4
312
Normal
0.4
298
Normal
0.3
446
Normal
0.3
661
Tumor
0.3
388
Normal
0.3
636
Normal
0.3
813
Tumor
0.3
297
Tumor
0.3
376
Normal
0.3
816
Normal
0.3
867
Tumor
0.3
627
Tumor
0.3
162
Normal
0.3
514
Normal
0.3
332
Normal
0.3
824
Normal
0.3
422
Normal
0.3
331
Tumor
0.3
465
Tumor
0.3
456
Normal
0.3
568
Normal
0.3
534
Normal
0.3
228
Normal
0.3
436
Normal
0.3
567
Tumor
0.3
136
Normal
0.3
365
Tumor
0.3
882
Normal
0.3
635
Tumor
0.3
564
Normal
0.3
1026
Normal
0.3
516
Normal
0.3
132
Normal
0.3
426
Normal
0.3
686
Normal
0.2
956
Normal
0.2
186
Normal
0.2
498
Normal
0.2
924
Normal
0.2
467
Tumor
0.2
138
Normal
0.2
554
Normal
0.2
852
Normal
0.2
1042
Normal
0.2
286
Normal
0.2
488
Normal
0.2
468
Normal
0.2
368
Normal
0.2
922
Normal
0.2
617
Tumor
0.2
284
Normal
0.2
923
Tumor
0.2
778
Normal
0.2
278
Normal
0.2
424
Normal
0.2
1022
Normal
0.2
964
Normal
0.2
267
Tumor
0.2
874
Normal
0.2
142
Normal
0.2
421
Tumor
0.2
968
Normal
0.2
958
Normal
0.2
466
Normal
0.2
314
Normal
0.2
533
Tumor
0.2
384
Normal
0.2
615
Tumor
0.2
952
Normal
0.2
868
Normal
0.2
428
Normal
0.2
431
Tumor
0.2
526
Normal
0.1
966
Normal
0.1
917
Tumor
0.1
716
Normal
0.1
148
Normal
0.1
858
Normal
0.1
728
Normal
0.1
572
Normal
0.1
524
Normal
0.1
212
Normal
0.1
443
Tumor
0.1
268
Normal
0.1
818
Normal
0.1
786
Normal
0.1
386
Normal
0.1
546
Normal
0.1
433
Tumor
0.1
464
Normal
0.1
232
Normal
0.1
926
Normal
0.1
921
Tumor
0.1
391
Tumor
0.1
963
Tumor
0.1
722
Normal
0.1
387
Tumor
0.1
414
Normal
0.1
865
Tumor
0.1
563
Tumor
0.1
618
Normal
0.0
628
Normal
0.0
147
Tumor
0.0
185
Tumor
0.0
861
Tumor
0.0
362
Normal
0.0
231
Tumor
0.0
434
Normal
0.0
484
Normal
0.0
916
Normal
0.0
616
Normal
0.0
912
Normal
0.0
573
Tumor
0.0
313
Tumor
0.0
343
Tumor
0.0
721
Tumor
0.0
351
Tumor
0.0
1028
Normal
0.0
455
Tumor
0.0
642
Normal
0.0
357
Tumor
0.0
1041
Tumor
0.0
664
Normal
0.0
435
Tumor
0.0
662
Normal
0.0
385
Tumor
-0.1
915
Tumor
-0.1
666
Normal
-0.1
172
Normal
-0.1
494
Normal
-0.1
918
Normal
-0.1
361
Tumor
-0.1
695
Tumor
-0.1
953
Tumor
-0.1
137
Tumor
-0.1
161
Tumor
-0.1
445
Tumor
-0.1
743
Tumor
-0.1
663
Tumor
-0.1
777
Tumor
-0.1
672
Normal
-0.1
258
Normal
-0.1
492
Normal
-0.1
737
Tumor
-0.1
975
Tumor
-0.1
145
Tumor
-0.1
785
Tumor
-0.1
187
Tumor
-0.2
873
Tumor
-0.2
756
Normal
-0.2
131
Tumor
-0.2
141
Tumor
-0.2
714
Normal
-0.2
665
Tumor
-0.2
366
Normal
-0.2
696
Normal
-0.2
648
Normal
-0.2
671
Tumor
-0.2
641
Tumor
-0.2
741
Tumor
-0.3
715
Tumor
-0.3
383
Tumor
-0.3
272
Normal
-0.3
223
Tumor
-0.3
262
Normal
-0.3
557
Tumor
-0.4
851
Tumor
-0.4
227
Tumor
-0.4
1025
Tumor
-0.4
943
Tumor
-0.4
647
Tumor
-0.4
965
Tumor
-0.4
817
Tumor
-0.4
257
Tumor
-0.4
483
Tumor
-0.4
537
Tumor
-0.4
857
Tumor
-0.4
957
Tumor
-0.4
525
Tumor
-0.4
171
Tumor
-0.5
135
Tumor
-0.5
1031
Tumor
-0.5
261
Tumor
-0.5
746
Normal
-0.5
1027
Tumor
-0.6
884
Normal
-0.6
925
Tumor
-0.6
823
Tumor
-0.6
745
Tumor
-0.6
685
Tumor
-0.6
375
Tumor
-0.7
755
Tumor
-0.7
724
Normal
-0.7
497
Tumor
-0.8
493
Tumor
-0.9
491
Tumor
-0.9
883
Tumor
-0.9
211
Tumor
-0.9
951
Tumor
-0.9
283
Tumor
-1.0
527
Tumor
-1.0
553
Tumor
-1.1
913
Tumor
-1.2
271
Tumor
-1.2
881
Tumor
-1.3
545
Tumor
-1.6
1021
Tumor
-1.8
911
Tumor
-2.4
877
Tumor
-3.5
471
Tumor
N/A
472
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
474
Normal
N/A
112
Tumor
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
478
Normal
N/A
481
Tumor
N/A
482
Normal
N/A
363
Tumor
N/A
364
Normal
N/A
123
Tumor
N/A
124
Normal
N/A
125
Tumor
N/A
126
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
1016
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
1013
Tumor
N/A
1044
Normal
N/A
1043
Tumor
N/A
977
Tumor
N/A
978
Normal
N/A
981
Tumor
N/A
982
Normal
N/A
983
Tumor
N/A
984
Normal
N/A
1046
Normal
N/A
1045
Tumor
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
535
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
416
Normal
N/A
447
Tumor
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
213
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
222
Normal
N/A
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
