We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DHX15 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
65.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
56.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
54.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
53.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
51.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
51.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
48.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
48.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
47.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
43.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
43.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
42.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
41.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
39.7
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
39.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
38.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
38.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
37.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
37.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
36.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
36.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
35.7
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
35.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
35.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
35.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
34.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
34.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
33.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
33.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
32.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
32.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
32.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
32.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
32.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
32.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
31.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
31.6
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
31.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
30.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
30.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
30.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
29.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
28.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
28.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
28.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
27.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
26.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
26.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
26.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
26.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
25.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
25.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
25.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
24.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
24.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
24.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
24.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
24.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
24.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
24.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
24.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
24.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
23.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
23.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
23.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
23.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
23.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
23.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
23.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
23.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
23.2
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
23.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
23.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
23.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
23.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
23.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
22.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
22.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
22.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
22.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
22.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
22.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
21.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
21.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
21.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
21.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
21.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
21.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
21.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
21.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
21.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
20.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
20.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
20.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
20.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
20.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
20.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
20.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
20.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
20.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
20.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
20.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
20.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
20.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
20.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
20.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
20.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
20.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
20.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
20.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
19.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
19.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
19.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
19.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
19.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
19.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
19.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
19.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
19.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
19.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
18.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
18.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
18.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
18.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
18.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
18.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
18.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
18.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
18.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
18.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
18.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
18.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
18.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
17.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
17.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
17.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
17.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
17.6
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
17.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
17.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
17.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
17.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
17.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
17.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
17.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
17.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
16.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
16.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
16.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
16.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
16.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
16.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
16.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
16.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
16.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
16.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
16.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
16.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
16.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
16.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
16.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
16.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
16.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
16.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
15.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
15.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
15.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
15.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
15.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
15.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
15.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
15.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
14.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
14.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
14.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
14.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
14.7
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
14.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
14.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
14.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
14.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
14.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
14.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
14.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
14.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
14.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
14.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
14.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
14.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
13.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
13.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
13.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
13.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
13.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
13.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
13.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
13.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
13.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
13.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
13.2
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
13.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
13.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
13.0
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
12.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
12.9
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
12.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
12.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
12.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
12.7
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
12.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
12.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
12.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
12.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
12.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
12.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
12.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
12.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
12.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
12.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
11.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
11.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
11.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
11.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
11.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
11.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
11.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
11.6
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
11.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
11.3
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
11.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
11.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
11.2
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
11.1
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
11.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
11.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
11.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
11.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
11.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
10.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
10.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
10.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
10.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
10.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
10.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
10.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
10.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
10.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
10.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
10.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
10.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
10.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
10.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
10.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
9.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
9.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
9.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
9.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
9.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
9.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
9.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
9.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
9.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
9.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
9.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
9.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
9.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
9.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
9.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
8.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
8.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
8.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
8.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
8.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
8.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
8.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
8.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
8.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
8.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
8.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
8.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
8.2
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
8.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
8.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
8.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
7.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
7.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
7.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
7.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
7.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
7.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
7.4
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
7.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
7.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
7.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
7.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
7.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
7.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
7.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
7.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
6.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
6.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
6.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
6.7
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
6.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
6.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
6.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
6.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
6.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
6.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
6.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
6.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
6.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
6.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
5.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
5.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
5.4
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
5.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
5.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
5.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
4.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
4.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
4.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
4.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
4.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
4.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
3.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
3.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
3.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
3.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
3.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
3.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
3.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
3.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
3.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
3.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
2.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
2.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
2.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
2.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
1.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
1.8
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1.4
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
1.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
1.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
0.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DHX15 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.6
Number of samples
231
Samples
Sample
Description
TPM
DO45189
0 years, female, NA, stage:2, alive, 1200 days
93.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
87.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
71.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
69.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
62.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
59.0
DO45303
0 years, female, NA, stage:3, alive, 990 days
57.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
56.2
DO45277
0 years, male, NA, stage:3, alive, 600 days
56.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
54.7
DO45127
0 years, male, NA, stage:3, dead, 420 days
54.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
53.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
53.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
52.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
50.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
49.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
48.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
48.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
48.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
48.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
47.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
47.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
46.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
45.5
DO50815
0 years, male, NA, stage:3, alive, 150 days
45.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
44.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
44.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
44.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
44.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
44.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
42.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
42.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
41.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
41.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
41.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
40.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
40.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
40.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
39.8
DO45267
0 years, male, NA, stage:3, dead, 570 days
38.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
38.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
38.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
36.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
36.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
36.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
36.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
36.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
36.2
DO23514
0 years, male, NA, stage:2, alive, 1290 days
36.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
35.3
DO45183
0 years, female, NA, stage:2, dead, 570 days
35.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
35.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
35.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
35.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
35.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
34.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
34.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
33.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
33.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
33.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
33.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
33.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
33.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
33.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
33.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
33.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
32.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
32.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
32.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
31.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
31.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
31.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
31.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
31.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
31.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
30.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
30.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
30.6
DO45237
0 years, male, NA, stage:2, alive, 900 days
30.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
30.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
30.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
30.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
30.1
DO45197
0 years, male, NA, stage:2, alive, 1170 days
29.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
29.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
29.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
29.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
28.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
28.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
28.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
28.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
28.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
28.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
28.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
28.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
28.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
28.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
27.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
27.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
27.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
27.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
27.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
27.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
27.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
27.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
27.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
27.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
27.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
26.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
26.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
26.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
26.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
26.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
26.1
DO23509
0 years, male, NA, stage:3, dead, 780 days
26.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
26.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
26.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
26.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
25.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
25.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
25.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
25.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
25.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
25.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
25.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
24.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
24.5
DO45153
0 years, female, NA, stage:2, alive, 1380 days
24.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
24.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
24.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
24.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
24.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
24.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
23.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
23.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
23.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
23.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
23.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
23.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
23.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
23.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
23.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
23.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
23.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
23.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
22.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
22.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
22.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
22.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
22.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
22.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
22.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
22.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
22.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
22.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
22.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
21.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
21.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
21.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
21.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
21.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
21.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
21.7
DO50857
0 years, male, NA, stage:2, alive, 210 days
21.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
21.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
21.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
21.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
21.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
21.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
21.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
21.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
20.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
20.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
20.6
DO23539
0 years, male, NA, stage:1, alive, 1110 days
20.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
20.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
20.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
19.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
19.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
19.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
18.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
18.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
18.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
18.8
DO50806
0 years, male, NA, stage:4, alive, 540 days
18.8
DO23550
0 years, male, NA, stage:1, alive, 990 days
18.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
18.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
18.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
18.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
18.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
18.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
18.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
18.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
17.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
17.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
17.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
17.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
17.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
17.2
DO48716
0 years, male, NA, stage:2, alive, 720 days
17.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
16.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
16.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
16.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
16.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
16.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
15.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
15.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
15.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
15.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
15.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
14.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
14.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
14.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
14.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
14.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
14.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
13.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
12.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
12.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
12.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
12.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
11.4
DO45107
0 years, female, NA, stage:2, alive, 1710 days
10.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
10.9
DO50816
0 years, male, NA, stage:2, alive, 390 days
10.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
10.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
10.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
9.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
8.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
8.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
6.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
743
Tumor
1.2
877
Tumor
1.0
313
Tumor
0.7
351
Tumor
0.7
813
Tumor
0.7
523
Tumor
0.7
943
Tumor
0.6
967
Tumor
0.6
965
Tumor
0.6
957
Tumor
0.6
297
Tumor
0.6
937
Tumor
0.6
635
Tumor
0.6
285
Tumor
0.6
865
Tumor
0.5
665
Tumor
0.5
427
Tumor
0.5
131
Tumor
0.5
517
Tumor
0.5
661
Tumor
0.5
814
Normal
0.5
497
Tumor
0.5
413
Tumor
0.5
724
Normal
0.5
375
Tumor
0.5
411
Tumor
0.4
161
Tumor
0.4
671
Tumor
0.4
983
Tumor
0.4
277
Tumor
0.4
431
Tumor
0.4
977
Tumor
0.4
715
Tumor
0.4
227
Tumor
0.4
425
Tumor
0.4
527
Tumor
0.4
463
Tumor
0.4
1013
Tumor
0.4
815
Tumor
0.4
567
Tumor
0.4
487
Tumor
0.4
355
Tumor
0.4
951
Tumor
0.3
395
Tumor
0.3
331
Tumor
0.3
1025
Tumor
0.3
385
Tumor
0.3
213
Tumor
0.3
443
Tumor
0.3
367
Tumor
0.3
123
Tumor
0.3
1027
Tumor
0.3
713
Tumor
0.3
571
Tumor
0.3
491
Tumor
0.3
1031
Tumor
0.3
641
Tumor
0.3
467
Tumor
0.3
343
Tumor
0.3
187
Tumor
0.3
391
Tumor
0.3
125
Tumor
0.2
923
Tumor
0.2
727
Tumor
0.2
755
Tumor
0.2
283
Tumor
0.2
537
Tumor
0.2
695
Tumor
0.2
383
Tumor
0.2
145
Tumor
0.2
493
Tumor
0.2
447
Tumor
0.2
113
Tumor
0.2
535
Tumor
0.2
975
Tumor
0.2
141
Tumor
0.2
327
Tumor
0.2
737
Tumor
0.2
921
Tumor
0.2
873
Tumor
0.2
112
Tumor
0.2
573
Tumor
0.2
823
Tumor
0.2
361
Tumor
0.2
171
Tumor
0.1
455
Tumor
0.1
393
Tumor
0.1
697
Tumor
0.1
271
Tumor
0.1
925
Tumor
0.1
545
Tumor
0.1
817
Tumor
0.1
563
Tumor
0.1
647
Tumor
0.1
1021
Tumor
0.1
515
Tumor
0.1
881
Tumor
0.1
267
Tumor
0.1
451
Tumor
0.1
217
Tumor
0.1
211
Tumor
0.1
867
Tumor
0.1
1043
Tumor
0.1
513
Tumor
0.1
221
Tumor
0.1
191
Tumor
0.1
685
Tumor
0.1
777
Tumor
0.1
311
Tumor
0.1
663
Tumor
0.1
223
Tumor
0.1
185
Tumor
0.1
341
Tumor
0.1
135
Tumor
0.1
953
Tumor
0.0
195
Tumor
0.0
557
Tumor
0.0
913
Tumor
0.0
423
Tumor
0.0
861
Tumor
0.0
433
Tumor
0.0
883
Tumor
0.0
1045
Tumor
0.0
477
Tumor
0.0
721
Tumor
0.0
553
Tumor
0.0
915
Tumor
0.0
314
Normal
0.0
231
Tumor
0.0
365
Tumor
0.0
257
Tumor
0.0
357
Tumor
0.0
473
Tumor
0.0
785
Tumor
0.0
332
Normal
0.0
384
Normal
0.0
363
Tumor
0.0
1041
Tumor
0.0
192
Normal
0.0
278
Normal
-0.1
525
Tumor
-0.1
261
Tumor
-0.1
981
Tumor
-0.1
741
Tumor
-0.1
857
Tumor
-0.1
666
Normal
-0.1
268
Normal
-0.1
434
Normal
-0.1
353
Tumor
-0.1
963
Tumor
-0.1
1015
Tumor
-0.1
955
Tumor
-0.1
465
Tumor
-0.1
445
Tumor
-0.1
444
Normal
-0.1
617
Tumor
-0.1
368
Normal
-0.1
298
Normal
-0.1
917
Tumor
-0.1
745
Tumor
-0.1
572
Normal
-0.1
636
Normal
-0.1
478
Normal
-0.1
627
Tumor
-0.1
352
Normal
-0.1
262
Normal
-0.1
662
Normal
-0.1
376
Normal
-0.1
851
Tumor
-0.1
664
Normal
-0.1
421
Tumor
-0.1
533
Tumor
-0.1
436
Normal
-0.1
744
Normal
-0.1
386
Normal
-0.1
966
Normal
-0.1
742
Normal
-0.1
196
Normal
-0.1
524
Normal
-0.1
218
Normal
-0.1
863
Tumor
-0.1
615
Tumor
-0.1
415
Tumor
-0.1
628
Normal
-0.1
738
Normal
-0.1
284
Normal
-0.1
466
Normal
-0.1
344
Normal
-0.1
258
Normal
-0.2
456
Normal
-0.2
146
Normal
-0.2
978
Normal
-0.2
312
Normal
-0.2
461
Tumor
-0.2
232
Normal
-0.2
432
Normal
-0.2
648
Normal
-0.2
488
Normal
-0.2
558
Normal
-0.2
498
Normal
-0.2
642
Normal
-0.2
911
Tumor
-0.2
188
Normal
-0.2
222
Normal
-0.2
938
Normal
-0.2
686
Normal
-0.2
912
Normal
-0.2
328
Normal
-0.2
224
Normal
-0.2
526
Normal
-0.2
272
Normal
-0.2
516
Normal
-0.2
464
Normal
-0.2
212
Normal
-0.2
884
Normal
-0.2
956
Normal
-0.2
286
Normal
-0.2
366
Normal
-0.2
483
Tumor
-0.2
538
Normal
-0.2
136
Normal
-0.2
124
Normal
-0.2
964
Normal
-0.2
492
Normal
-0.2
944
Normal
-0.2
723
Tumor
-0.2
536
Normal
-0.2
446
Normal
-0.2
1016
Normal
-0.2
618
Normal
-0.2
468
Normal
-0.2
481
Tumor
-0.2
394
Normal
-0.2
362
Normal
-0.2
412
Normal
-0.2
214
Normal
-0.2
1014
Normal
-0.2
388
Normal
-0.2
482
Normal
-0.2
564
Normal
-0.2
428
Normal
-0.2
435
Tumor
-0.2
484
Normal
-0.2
924
Normal
-0.2
392
Normal
-0.2
982
Normal
-0.2
471
Tumor
-0.2
786
Normal
-0.2
878
Normal
-0.2
728
Normal
-0.2
142
Normal
-0.2
138
Normal
-0.2
984
Normal
-0.2
696
Normal
-0.2
132
Normal
-0.2
518
Normal
-0.2
528
Normal
-0.2
514
Normal
-0.2
534
Normal
-0.2
126
Normal
-0.2
387
Tumor
-0.2
396
Normal
-0.2
914
Normal
-0.2
616
Normal
-0.2
954
Normal
-0.2
364
Normal
-0.2
414
Normal
-0.2
574
Normal
-0.2
426
Normal
-0.2
494
Normal
-0.2
127
Tumor
-0.2
354
Normal
-0.2
172
Normal
-0.2
1028
Normal
-0.2
858
Normal
-0.2
416
Normal
-0.2
882
Normal
-0.2
672
Normal
-0.2
916
Normal
-0.2
824
Normal
-0.2
778
Normal
-0.2
342
Normal
-0.2
698
Normal
-0.2
976
Normal
-0.2
228
Normal
-0.2
452
Normal
-0.2
866
Normal
-0.2
474
Normal
-0.2
952
Normal
-0.2
358
Normal
-0.2
864
Normal
-0.3
462
Normal
-0.3
546
Normal
-0.3
968
Normal
-0.3
162
Normal
-0.3
918
Normal
-0.3
868
Normal
-0.3
862
Normal
-0.3
756
Normal
-0.3
422
Normal
-0.3
114
Normal
-0.3
1046
Normal
-0.3
448
Normal
-0.3
148
Normal
-0.3
356
Normal
-0.3
568
Normal
-0.3
111
Normal
-0.3
716
Normal
-0.3
714
Normal
-0.3
186
Normal
-0.3
472
Normal
-0.3
424
Normal
-0.3
1042
Normal
-0.3
922
Normal
-0.3
818
Normal
-0.3
926
Normal
-0.3
746
Normal
-0.3
554
Normal
-0.3
722
Normal
-0.3
852
Normal
-0.3
1044
Normal
-0.3
958
Normal
-0.3
128
Normal
-0.3
816
Normal
-0.3
1022
Normal
-0.3
147
Tumor
-0.3
1026
Normal
-0.3
137
Tumor
-0.3
874
Normal
-0.3
1032
Normal
-0.3
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
