HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:7.2 nTPM
HPA Brain:33.0 nTPM
GTEx:7.2 nTPM
FANTOM5:18.9 Scaled Tags Per Million
Pig:40.0 nTPM
Mouse:47.2 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000262Antibody HPA006503
Glial cells -Not detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 33.0
Sample id Sample description nTPM
Hippocampus
nTPM: 22.2
1898 Male, age 80, left hemisphere 28.9
2621 Female, age 67, right hemisphere 24.7
1855 Male, age 76, left hemisphere 23.7
2148 Female, age 91, left hemisphere 21.2
2529 Female, age 94, left hemisphere 17.6
1911 Female, age 85, right hemisphere 17.2
Dentate gyrus
nTPM: 24.1
1927 Female, age 91, both hemispheres 29.6
2010 Male, age 76, both hemispheres 26.3
2530 Female, age 94, left hemisphere 24.0
2531 Female, age 67, both hemispheres 23.6
2246 Female, age 85, both hemispheres 22.4
2528 Male, age 74, both hemispheres 18.9
Entorhinal gyrus
nTPM: 23.1
1787 Male, age 76, left hemisphere 26.6
2613 Female, age 94, left hemisphere 26.2
1938 Female, age 85, left hemisphere 25.0
2764 Male, age 80, right hemisphere 23.8
2686 Male, age 75, right hemisphere 19.6
2117 Female, age 91, right hemisphere 17.1
Hippocampus, CA1
nTPM: 24.9
2749 Male, age 80, left hemisphere 31.3
2045 Male, age 76, both hemispheres 28.2
1873 Female, age 85, both hemispheres 24.2
2082 Female, age 91, right hemisphere 22.4
2527 Male, age 74, both hemispheres 18.5
Hippocampus, CA2
nTPM: 23.9
1892 Male, age 76, both hemispheres 30.5
1963 Male, age 80, left hemisphere 26.1
2437 Female, age 94, left hemisphere 23.4
1940 Female, age 85, left hemisphere 22.6
2249 Male, age 74, both hemispheres 21.8
2113 Female, age 91, right hemisphere 19.2
Hippocampus, CA3
nTPM: 26.8
2436 Male, age 74, both hemispheres 43.8
1867 Male, age 76, both hemispheres 26.1
2861 Female, age 67, both hemispheres 25.4
2137 Male, age 80, left hemisphere 25.2
2620 Female, age 94, left hemisphere 21.9
1891 Female, age 85, both hemispheres 18.1
Parahippocampal cortex
nTPM: 24.9
1850 Male, age 80, both hemispheres 29.0
2250 Female, age 67, right hemisphere 28.6
2693 Female, age 94, both hemispheres 27.7
1990 Female, age 91, right hemisphere 27.6
1933 Female, age 85, both hemispheres 26.2
2245 Female, age 91, both hemispheres 25.7
2018 Male, age 76, both hemispheres 24.6
2532 Female, age 72, left hemisphere 23.5
2622 Female, age 67, right hemisphere 21.1
2692 Male, age 74, both hemispheres 15.1
Perirhinal gyrus
nTPM: 33.0
1847 Female, age 91, left hemisphere 39.7
2521 Female, age 94, right hemisphere 36.7
1794 Male, age 80, right hemisphere 33.5
1841 Female, age 85, right hemisphere 30.9
2848 Male, age 76, right hemisphere 24.2
Subiculum
nTPM: 19.1
1977 Female, age 85, both hemispheres 25.5
1901 Male, age 80, both hemispheres 19.5
2619 Male, age 74, both hemispheres 18.7
2729 Female, age 91, right hemisphere 17.2
2042 Male, age 76, both hemispheres 16.8
2438 Female, age 94, left hemisphere 16.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 7.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.2
Samples: 197

Max nTPM: 20.5
Min nTPM: 1.3
Std nTPM: 3.5
Median nTPM: 6.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 20.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 20.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 18.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 17.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 16.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 16.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 14.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 14.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 14.3
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 13.5
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 13.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 18.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.9
FF:10169-103B7 60 years, female 22.8
FF:10153-102I9 76 years, female 15.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 40.0
Pig sample Sample description nTPM
Subiculum
nTPM: 40.0
Samples: 4

Max nTPM: 48.2
Min nTPM: 35.8
Sample A Female 48.2
Sample B Female 37.6
Sample C Male 38.5
Sample D Male 35.8
Dorsal hippocampus
nTPM: 36.1
Samples: 4

Max nTPM: 39.1
Min nTPM: 33.1
Sample A Female 39.1
Sample B Female 38.0
Sample C Male 34.1
Sample D Male 33.1
Entorhinal cortex
nTPM: 38.3
Samples: 4

Max nTPM: 41.3
Min nTPM: 33.8
Sample A Female 40.4
Sample B Female 37.5
Sample C Male 41.3
Sample D Male 33.8
Ventral hippocampus
nTPM: 34.8
Samples: 4

Max nTPM: 44.8
Min nTPM: 25.6
Sample A Female 35.6
Sample B Female 25.6
Sample C Male 44.8
Sample D Male 33.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 47.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.2
Samples: 4

Max nTPM: 59.8
Min nTPM: 40.7
Sample A Male 43.4
Sample B Male 44.8
Sample C Female 40.7
Sample D Female 59.8
Hippocampal formation
nTPM: 39.8
Samples: 4

Max nTPM: 49.2
Min nTPM: 30.6
Sample A Male 30.6
Sample B Male 36.2
Sample C Female 43.1
Sample D Female 49.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
72079987 Antisense, RP_051017_03_B09, Mouse strain C57BL/6J (56 days, male) 3.8
68919024 Antisense, RP_050301_02_D07, Mouse strain C57BL/6J (56 days, male) 1.1

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