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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OCIAD1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
111.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
317.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
314.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
264.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
256.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
243.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
242.5
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
233.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
227.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
226.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
224.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
224.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
220.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
217.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
211.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
209.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
205.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
199.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
197.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
195.9
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
195.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
193.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
193.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
192.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
191.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
191.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
190.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
188.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
187.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
186.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
183.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
180.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
178.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
178.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
178.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
177.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
177.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
171.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
171.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
170.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
169.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
169.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
163.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
163.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
161.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
161.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
159.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
158.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
157.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
156.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
155.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
154.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
152.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
151.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
151.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
151.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
150.7
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
150.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
149.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
149.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
148.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
146.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
146.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
146.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
145.8
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
145.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
145.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
143.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
142.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
142.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
141.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
141.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
141.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
141.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
140.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
140.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
140.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
140.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
139.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
139.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
138.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
138.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
138.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
138.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
138.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
137.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
136.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
136.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
136.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
136.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
135.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
135.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
134.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
133.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
133.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
133.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
132.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
132.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
132.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
131.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
131.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
131.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
131.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
131.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
130.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
130.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
130.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
129.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
129.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
128.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
128.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
128.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
128.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
128.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
127.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
127.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
127.1
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
126.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
126.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
125.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
125.6
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
125.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
125.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
124.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
124.2
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
123.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
123.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
123.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
123.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
122.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
121.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
121.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
120.7
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
120.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
120.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
120.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
119.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
119.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
119.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
118.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
118.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
117.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
117.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
117.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
117.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
117.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
117.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
117.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
116.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
116.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
116.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
116.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
116.1
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
115.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
114.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
114.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
114.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
113.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
113.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
113.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
112.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
112.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
112.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
112.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
111.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
111.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
111.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
111.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
110.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
110.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
110.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
109.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
109.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
109.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
109.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
109.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
109.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
108.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
108.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
108.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
108.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
108.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
107.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
107.8
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
107.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
107.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
107.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
106.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
106.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
106.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
105.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
105.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
105.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
105.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
104.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
104.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
104.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
104.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
102.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
102.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
102.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
101.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
101.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
100.8
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
100.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
100.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
100.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
100.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
100.4
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
100.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
100.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
99.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
99.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
99.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
98.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
98.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
98.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
98.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
98.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
97.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
97.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
97.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
96.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
96.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
96.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
96.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
96.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
96.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
95.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
94.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
94.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
94.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
94.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
94.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
94.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
93.4
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
93.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
93.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
92.9
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
92.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
92.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
92.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
92.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
91.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
90.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
90.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
90.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
89.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
89.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
89.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
89.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
89.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
88.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
87.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
87.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
87.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
86.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
86.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
86.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
86.4
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
85.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
85.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
85.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
84.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
84.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
83.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
82.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
82.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
82.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
81.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
80.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
80.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
80.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
80.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
79.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
78.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
78.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
78.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
77.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
77.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
77.7
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
76.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
76.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
75.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
74.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
74.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
74.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
73.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
73.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
73.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
72.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
71.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
70.5
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
69.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
68.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
68.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
68.3
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
67.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
66.9
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
66.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
66.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
66.6
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
66.5
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
66.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
66.2
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
66.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
65.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
65.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
64.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
63.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
63.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
63.7
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
62.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
62.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
62.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
61.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
60.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
60.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
58.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
58.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
58.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
58.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
56.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
56.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
56.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
56.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
55.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
55.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
54.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
54.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
54.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
54.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
52.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
52.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
51.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
51.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
51.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
50.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
50.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
50.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
48.8
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
48.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
48.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
47.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
45.6
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
45.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
42.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
42.9
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
42.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
41.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
41.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
41.3
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
39.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
38.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
37.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
36.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
32.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
31.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
29.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
26.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
22.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
20.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OCIAD1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
66.8
Number of samples
231
Samples
Sample
Description
TPM
DO45239
0 years, male, NA, stage:2, alive, 870 days
225.3
DO45205
0 years, female, NA, stage:2, dead, 90 days
195.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
179.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
139.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
134.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
130.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
127.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
123.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
110.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
109.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
109.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
108.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
108.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
108.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
108.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
104.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
99.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
98.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
97.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
97.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
95.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
94.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
94.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
94.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
93.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
93.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
92.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
92.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
91.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
90.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
89.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
89.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
85.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
83.4
DO45301
0 years, male, NA, stage:2, dead, 1440 days
82.5
DO45099
0 years, male, NA, stage:3, alive, 1590 days
81.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
81.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
81.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
80.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
80.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
80.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
79.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
79.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
78.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
78.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
78.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
78.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
78.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
77.8
DO45269
0 years, male, NA, stage:3, alive, 750 days
77.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
77.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
77.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
76.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
75.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
75.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
75.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
75.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
74.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
74.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
74.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
74.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
74.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
73.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
73.7
DO50791
0 years, female, NA, stage:1, dead, 480 days
73.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
73.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
72.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
72.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
72.2
DO50840
0 years, male, NA, stage:2, alive, 330 days
72.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
71.9
DO45177
0 years, female, NA, stage:3, alive, 1260 days
71.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
71.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
71.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
71.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
71.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
70.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
70.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
70.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
70.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
69.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
69.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
69.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
69.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
68.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
68.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
67.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
67.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
67.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
67.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
67.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
66.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
66.4
DO45281
0 years, male, NA, stage:4, alive, 750 days
65.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
65.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
65.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
65.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
65.2
DO45121
0 years, male, NA, stage:3, alive, 1530 days
64.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
64.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
64.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
64.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
64.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
64.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
64.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
64.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
63.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
63.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
63.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
63.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
63.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
63.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
62.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
62.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
62.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
62.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
62.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
62.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
61.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
61.6
DO23508
0 years, female, NA, stage:2, alive, 390 days
61.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
61.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
60.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
60.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
60.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
60.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
60.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
59.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
59.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
59.7
DO23551
0 years, male, NA, stage:3, dead, 150 days
59.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
59.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
59.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
59.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
59.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
58.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
58.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
58.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
57.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
57.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
57.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
56.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
56.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
56.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
56.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
56.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
56.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
56.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
56.2
DO48717
0 years, male, NA, stage:4, dead, 180 days
56.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
56.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
55.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
55.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
55.7
DO48730
0 years, female, NA, stage:2, alive, 630 days
55.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
55.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
55.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
55.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
55.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
55.2
DO23527
0 years, male, NA, stage:1, alive, 1050 days
55.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
55.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
54.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
54.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
54.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
53.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
52.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
52.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
52.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
52.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
52.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
52.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
52.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
52.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
51.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
51.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
51.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
51.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
51.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
51.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
51.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
51.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
50.6
DO23549
0 years, male, NA, stage:3, alive, 990 days
50.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
50.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
50.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
49.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
49.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
49.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
49.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
49.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
48.7
DO48674
0 years, male, NA, stage:2, alive, 1260 days
48.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
48.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
48.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
48.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
48.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
47.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
47.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
47.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
47.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
46.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
46.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
45.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
45.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
45.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
45.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
45.1
DO23530
0 years, male, NA, stage:4, dead, 180 days
45.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
44.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
44.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
44.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
42.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
42.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
42.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
39.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
39.0
DO48679
0 years, male, NA, stage:2, alive, 1200 days
38.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
38.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
37.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
37.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
36.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
35.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
35.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
32.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
31.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
29.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
29.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
28.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
26.8
DO48741
0 years, male, NA, stage:3, alive, 240 days
24.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
1045
Tumor
1.0
823
Tumor
1.0
571
Tumor
0.9
925
Tumor
0.9
627
Tumor
0.9
1043
Tumor
0.7
471
Tumor
0.7
1025
Tumor
0.7
231
Tumor
0.7
641
Tumor
0.7
665
Tumor
0.7
615
Tumor
0.6
635
Tumor
0.6
477
Tumor
0.6
515
Tumor
0.6
1041
Tumor
0.5
967
Tumor
0.5
937
Tumor
0.5
1027
Tumor
0.5
955
Tumor
0.4
745
Tumor
0.4
697
Tumor
0.4
443
Tumor
0.4
513
Tumor
0.4
412
Normal
0.4
361
Tumor
0.4
742
Normal
0.4
698
Normal
0.4
553
Tumor
0.4
452
Normal
0.4
112
Tumor
0.4
738
Normal
0.4
448
Normal
0.4
534
Normal
0.4
572
Normal
0.4
127
Tumor
0.4
411
Tumor
0.4
723
Tumor
0.4
436
Normal
0.4
922
Normal
0.4
1032
Normal
0.3
135
Tumor
0.3
132
Normal
0.3
636
Normal
0.3
518
Normal
0.3
431
Tumor
0.3
863
Tumor
0.3
755
Tumor
0.3
376
Normal
0.3
297
Tumor
0.3
426
Normal
0.3
981
Tumor
0.3
1046
Normal
0.3
648
Normal
0.3
1014
Normal
0.3
568
Normal
0.3
546
Normal
0.3
954
Normal
0.3
938
Normal
0.3
145
Tumor
0.3
714
Normal
0.3
868
Normal
0.3
1022
Normal
0.3
696
Normal
0.3
912
Normal
0.3
915
Tumor
0.3
526
Normal
0.3
128
Normal
0.3
984
Normal
0.3
487
Tumor
0.3
944
Normal
0.3
911
Tumor
0.3
484
Normal
0.3
958
Normal
0.3
423
Tumor
0.3
616
Normal
0.3
862
Normal
0.3
722
Normal
0.3
421
Tumor
0.3
558
Normal
0.3
964
Normal
0.3
528
Normal
0.3
462
Normal
0.3
342
Normal
0.3
716
Normal
0.3
1028
Normal
0.3
554
Normal
0.3
392
Normal
0.3
278
Normal
0.3
422
Normal
0.3
1015
Tumor
0.3
824
Normal
0.3
728
Normal
0.3
864
Normal
0.3
356
Normal
0.3
786
Normal
0.3
474
Normal
0.2
671
Tumor
0.2
882
Normal
0.2
258
Normal
0.2
494
Normal
0.2
222
Normal
0.2
137
Tumor
0.2
514
Normal
0.2
968
Normal
0.2
664
Normal
0.2
136
Normal
0.2
884
Normal
0.2
416
Normal
0.2
818
Normal
0.2
114
Normal
0.2
537
Tumor
0.2
618
Normal
0.2
873
Tumor
0.2
1042
Normal
0.2
564
Normal
0.2
852
Normal
0.2
746
Normal
0.2
214
Normal
0.2
866
Normal
0.2
455
Tumor
0.2
878
Normal
0.2
364
Normal
0.2
466
Normal
0.2
924
Normal
0.2
744
Normal
0.2
284
Normal
0.2
365
Tumor
0.2
686
Normal
0.2
918
Normal
0.2
172
Normal
0.2
232
Normal
0.2
952
Normal
0.2
538
Normal
0.2
186
Normal
0.2
527
Tumor
0.2
358
Normal
0.2
446
Normal
0.2
523
Tumor
0.2
227
Tumor
0.2
921
Tumor
0.2
488
Normal
0.2
756
Normal
0.2
1026
Normal
0.2
666
Normal
0.2
472
Normal
0.2
672
Normal
0.2
982
Normal
0.2
138
Normal
0.2
524
Normal
0.2
858
Normal
0.2
414
Normal
0.2
926
Normal
0.2
662
Normal
0.2
354
Normal
0.2
956
Normal
0.2
628
Normal
0.2
424
Normal
0.2
464
Normal
0.2
877
Tumor
0.2
142
Normal
0.2
298
Normal
0.2
482
Normal
0.2
344
Normal
0.2
328
Normal
0.2
124
Normal
0.1
695
Tumor
0.1
468
Normal
0.1
976
Normal
0.1
816
Normal
0.1
111
Normal
0.1
557
Tumor
0.1
785
Tumor
0.1
867
Tumor
0.1
148
Normal
0.1
261
Tumor
0.1
642
Normal
0.1
428
Normal
0.1
1016
Normal
0.1
388
Normal
0.1
267
Tumor
0.1
351
Tumor
0.1
146
Normal
0.1
517
Tumor
0.1
162
Normal
0.1
865
Tumor
0.1
394
Normal
0.1
916
Normal
0.1
432
Normal
0.1
914
Normal
0.1
224
Normal
0.1
778
Normal
0.1
228
Normal
0.1
314
Normal
0.1
212
Normal
0.1
1044
Normal
0.1
362
Normal
0.1
516
Normal
0.1
966
Normal
0.1
366
Normal
0.1
978
Normal
0.1
535
Tumor
0.1
352
Normal
0.1
975
Tumor
0.1
857
Tumor
0.1
368
Normal
0.1
874
Normal
0.0
257
Tumor
0.0
977
Tumor
0.0
737
Tumor
0.0
262
Normal
0.0
218
Normal
0.0
813
Tumor
0.0
286
Normal
0.0
536
Normal
0.0
965
Tumor
0.0
268
Normal
0.0
456
Normal
0.0
123
Tumor
0.0
396
Normal
0.0
187
Tumor
0.0
332
Normal
0.0
126
Normal
0.0
478
Normal
0.0
383
Tumor
0.0
312
Normal
0.0
196
Normal
0.0
715
Tumor
0.0
386
Normal
0.0
481
Tumor
0.0
113
Tumor
0.0
574
Normal
0.0
171
Tumor
0.0
272
Normal
0.0
1021
Tumor
0.0
341
Tumor
0.0
951
Tumor
0.0
492
Normal
0.0
861
Tumor
0.0
815
Tumor
0.0
393
Tumor
0.0
313
Tumor
-0.1
415
Tumor
-0.1
451
Tumor
-0.1
713
Tumor
-0.1
1031
Tumor
-0.1
433
Tumor
-0.1
277
Tumor
-0.1
721
Tumor
-0.1
367
Tumor
-0.1
384
Normal
-0.1
563
Tumor
-0.1
923
Tumor
-0.1
741
Tumor
-0.1
353
Tumor
-0.1
957
Tumor
-0.1
617
Tumor
-0.1
188
Normal
-0.1
465
Tumor
-0.1
363
Tumor
-0.1
983
Tumor
-0.1
913
Tumor
-0.1
435
Tumor
-0.1
213
Tumor
-0.1
444
Normal
-0.1
663
Tumor
-0.1
434
Normal
-0.1
727
Tumor
-0.1
473
Tumor
-0.2
221
Tumor
-0.2
327
Tumor
-0.2
271
Tumor
-0.2
375
Tumor
-0.2
743
Tumor
-0.2
191
Tumor
-0.2
498
Normal
-0.2
391
Tumor
-0.2
567
Tumor
-0.2
223
Tumor
-0.2
814
Normal
-0.2
427
Tumor
-0.2
817
Tumor
-0.2
647
Tumor
-0.2
195
Tumor
-0.3
413
Tumor
-0.3
447
Tumor
-0.3
131
Tumor
-0.3
685
Tumor
-0.3
963
Tumor
-0.3
217
Tumor
-0.3
491
Tumor
-0.3
285
Tumor
-0.3
425
Tumor
-0.3
777
Tumor
-0.3
493
Tumor
-0.4
395
Tumor
-0.4
161
Tumor
-0.4
185
Tumor
-0.4
883
Tumor
-0.4
461
Tumor
-0.4
1013
Tumor
-0.4
192
Normal
-0.4
355
Tumor
-0.4
533
Tumor
-0.4
497
Tumor
-0.4
943
Tumor
-0.4
343
Tumor
-0.4
385
Tumor
-0.4
445
Tumor
-0.4
881
Tumor
-0.5
661
Tumor
-0.5
483
Tumor
-0.5
573
Tumor
-0.5
724
Normal
-0.5
463
Tumor
-0.5
467
Tumor
-0.5
387
Tumor
-0.6
211
Tumor
-0.6
125
Tumor
-0.6
141
Tumor
-0.6
357
Tumor
-0.7
545
Tumor
-0.7
311
Tumor
-0.7
525
Tumor
-0.7
147
Tumor
-0.8
851
Tumor
-0.8
917
Tumor
-0.8
331
Tumor
-0.8
953
Tumor
-0.8
283
Tumor
-0.9
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.