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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PHF12 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
62.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
52.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
31.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
31.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
30.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
22.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
21.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
21.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
20.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
19.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
18.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
17.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
16.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
13.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
13.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
13.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
10.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
9.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
9.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
9.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
9.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
8.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
8.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
8.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
8.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
7.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
7.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
7.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
7.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
7.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
7.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
7.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
7.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
7.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
7.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
7.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
7.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
6.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
6.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
6.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
6.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
5.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
5.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
5.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
5.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
5.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
5.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
5.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
5.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
4.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
4.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
4.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
4.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
4.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
4.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
4.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
4.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
4.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
3.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
3.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
2.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PHF12 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
24.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
20.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
20.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
20.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
19.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
19.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
18.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
18.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
18.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
18.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
18.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
17.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
17.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
17.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
16.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
16.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
16.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
16.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
16.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
15.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
15.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
15.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
15.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
15.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
15.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
15.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
15.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
15.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
15.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
15.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
15.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
15.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
15.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
15.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
15.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
14.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
14.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
14.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
14.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
14.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
14.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
14.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
14.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
14.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
14.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
14.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
14.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
14.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
14.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
14.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
14.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
14.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
14.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
14.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
14.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
14.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
14.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
14.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
14.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
14.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
14.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
14.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
14.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
13.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
13.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
13.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
13.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
13.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
13.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
13.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
13.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
13.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
13.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
13.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
13.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
13.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
13.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
13.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
13.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
13.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
13.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
13.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
13.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
13.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
13.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
13.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
13.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
13.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
13.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
13.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
13.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
13.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
13.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
13.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
13.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
13.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
13.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
12.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
12.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
12.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
12.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
12.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
12.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
12.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
12.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
12.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
12.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
12.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
12.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
12.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
12.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
12.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
12.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
12.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
12.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
12.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
12.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
12.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
12.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
12.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
12.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
12.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
12.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
12.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
12.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
12.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
12.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
12.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
12.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
12.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
12.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
12.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
12.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
12.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
12.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
12.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
12.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
12.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
12.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
12.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
12.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
11.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
11.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
11.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
11.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
11.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
11.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
11.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
11.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
11.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
11.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
11.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
11.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
11.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
11.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
11.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
11.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
11.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
11.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
11.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
11.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
11.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
11.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
11.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
11.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
11.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
11.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
11.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
11.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
11.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
11.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
11.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
11.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
11.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
11.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
11.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
11.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
11.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
11.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
11.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
11.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
11.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
11.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
11.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
11.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
11.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
11.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
11.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
11.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
11.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
11.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
11.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
11.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
11.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
11.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
10.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
10.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
10.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
10.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
10.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
10.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
10.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
10.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
10.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
10.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
10.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
10.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
10.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
10.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
10.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
10.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
10.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
10.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
10.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
10.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
10.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
10.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
10.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
10.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
10.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
10.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
10.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
10.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
10.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
10.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
10.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
10.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
10.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
10.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
10.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
10.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
10.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
10.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
10.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
10.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
10.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
10.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
10.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
10.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
10.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
10.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
10.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
10.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
10.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
10.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
10.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
10.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
10.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
10.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
10.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
10.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
10.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
10.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
10.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
9.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
9.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
9.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
9.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
9.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
9.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
9.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
9.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
9.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
9.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
9.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
9.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
9.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
9.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
9.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
9.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
9.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
9.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
9.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
9.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
9.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
9.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
9.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
9.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
9.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
9.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
9.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
9.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
9.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
9.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
9.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
9.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
9.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
9.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
9.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
9.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
9.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
9.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
9.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
9.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
9.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
9.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
9.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
9.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
9.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
9.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
9.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
9.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
9.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
9.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
9.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
9.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
9.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
9.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
9.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
9.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
9.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
8.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
8.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
8.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
8.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
8.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
8.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
8.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
8.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
8.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
8.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
8.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
8.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
8.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
8.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
8.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
8.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
8.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
8.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
8.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
8.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
8.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
8.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
8.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
8.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
8.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
8.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
8.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
8.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
8.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
8.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
8.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
8.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
8.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
8.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
8.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
8.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
8.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
8.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
8.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
8.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
8.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
8.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
8.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
8.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
8.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
8.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
8.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
8.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
8.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
7.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
7.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
7.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
7.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
7.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
7.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
7.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
7.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
7.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
7.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
7.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
7.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
7.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
7.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
7.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
7.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
7.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
7.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
7.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
7.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
7.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
7.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
7.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
7.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
7.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
7.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
7.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
7.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
7.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
7.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
7.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
7.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
7.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
7.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
7.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
7.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
7.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
7.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
7.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
7.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
7.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
7.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
7.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
7.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
6.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
6.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
6.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
6.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
6.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
6.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
6.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
6.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
6.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
6.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
6.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
6.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
6.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
6.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
6.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
6.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
6.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
6.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
6.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
6.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
6.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
6.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
6.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
6.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
6.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
6.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
6.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
5.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
5.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
5.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
5.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
5.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
5.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
5.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
5.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
5.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
5.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
5.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
5.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
5.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
5.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
5.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
5.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
5.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
5.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
5.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
5.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
5.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
5.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
5.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
5.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
5.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
5.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
5.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
5.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
4.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
4.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
4.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
4.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
4.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
4.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
4.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
3.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
3.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
3.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
3.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
3.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
3.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
3.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
3.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
2.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
2.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
1.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PHF12 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
27.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
20.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
20.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
18.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
18.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
18.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
18.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
18.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
18.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
17.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
17.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
17.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
17.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
17.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
16.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
16.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
16.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
16.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
16.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
16.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
16.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
16.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
15.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
15.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
15.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
15.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
15.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
15.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
15.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
15.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
14.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
14.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
14.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
14.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
14.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
14.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
14.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
14.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
14.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
14.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
14.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
14.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
14.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
13.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
13.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
13.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
13.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
13.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
13.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
13.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
13.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
13.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
13.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
13.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
13.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
12.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
12.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
12.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
12.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
12.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
12.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
12.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
12.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
12.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
12.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
11.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
11.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
11.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
11.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
11.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
10.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
10.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
10.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
10.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
10.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
9.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
9.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
9.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
8.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
8.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
8.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
8.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
8.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
8.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
8.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
8.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
7.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
7.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
7.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
7.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
6.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
6.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
6.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
6.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PHF12 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
53.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
51.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
50.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
50.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
49.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
44.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
43.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
42.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
42.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
39.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
39.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
37.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
34.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
33.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
33.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
33.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
33.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
30.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
29.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
28.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
28.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
27.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
27.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
27.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
27.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
27.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
27.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
27.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
27.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
26.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
26.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
26.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
26.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
26.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
26.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
25.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
24.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
23.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
23.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
23.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
22.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
22.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
22.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
22.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
22.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
22.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
22.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
22.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
22.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
22.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
22.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
21.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
21.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
21.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
21.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
21.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
21.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
21.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
21.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
21.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
20.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
20.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
20.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
20.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
20.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
19.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
19.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
19.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
19.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
19.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
19.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
18.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
18.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
18.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
18.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
18.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
18.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
18.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
18.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
18.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
18.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
17.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
17.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
17.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
17.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
17.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
17.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
17.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
16.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
16.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
16.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
16.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
16.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
16.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
16.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
16.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
16.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
16.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
16.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
16.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
15.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
15.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
15.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
15.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
15.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
15.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
15.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
15.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
15.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
15.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
15.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
15.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
15.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
15.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
15.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
14.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
14.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
14.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
14.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
14.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
14.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
14.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
14.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
14.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
14.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
14.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
14.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
14.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
14.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
14.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
14.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
14.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
14.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
14.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
14.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
13.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
13.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
13.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
13.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
13.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
13.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
13.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
13.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
13.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
13.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
13.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
13.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
13.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
13.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
12.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
12.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
12.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
12.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
12.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
12.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
12.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
12.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
12.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
12.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
11.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
11.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
11.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
11.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
11.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
11.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
11.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
11.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
11.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
11.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
11.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
11.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
11.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
11.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
11.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
11.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
11.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
10.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
10.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
10.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
10.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
10.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
10.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
10.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
10.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
10.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
10.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
10.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
9.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
9.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
9.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
9.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
9.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
9.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
9.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
9.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
9.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
9.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
9.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
9.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
9.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
9.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
9.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
9.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
9.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
8.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
8.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
8.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
8.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
8.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
8.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
8.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
8.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
8.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
8.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
8.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
7.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
7.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
7.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
7.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
7.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
7.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
7.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
7.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
7.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
7.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
7.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
7.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
7.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
7.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
7.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
6.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
6.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
6.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
6.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
6.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
6.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
6.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
6.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
6.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
6.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
5.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
5.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
5.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
5.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
5.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
5.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
4.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
4.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
4.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
4.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
4.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
4.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
4.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
4.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
3.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
3.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
3.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
2.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
2.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
2.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0066470004
Tumor
1.8
CPT0019990003
Tumor
1.1
CPT0089460004
Tumor
1.0
CPT0006900003
Tumor
0.8
CPT0086030003
Tumor
0.5
CPT0002370001
Normal
0.5
CPT0009060003
Tumor
0.5
CPT0077490003
Tumor
0.4
CPT0078930003
Tumor
0.4
CPT0017410003
Tumor
0.4
CPT0075560003
Tumor
0.3
CPT0069190001
Normal
0.3
CPT0025060001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0012920003
Normal
0.2
CPT0063640001
Normal
0.2
CPT0001230001
Normal
0.2
CPT0023690003
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0009020003
Normal
0.2
CPT0000640003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0014130001
Normal
0.2
CPT0069160003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0077110003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0006440003
Tumor
0.1
CPT0006630003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0015730003
Tumor
0.0
CPT0076330003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0077500001
Normal
-0.1
CPT0092290003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0085670003
Tumor
-0.1
CPT0025610001
Normal
-0.1
CPT0012900004
Tumor
-0.1
CPT0001260009
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0025050003
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0079380003
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0021240003
Tumor
-0.2
CPT0077140001
Normal
-0.2
CPT0025880003
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0023710001
Normal
-0.3
CPT0088710001
Normal
-0.3
CPT0025230003
Tumor
-0.3
CPT0078940001
Normal
-0.3
CPT0081600003
Tumor
-0.4
CPT0020020001
Normal
-0.4
CPT0066430001
Normal
-0.4
CPT0010120001
Normal
-0.4
CPT0078800003
Tumor
-0.4
CPT0088640003
Normal
-0.5
CPT0088970003
Tumor
-0.5
CPT0089480003
Normal
-0.5
CPT0088760003
Tumor
-0.5
CPT0010110003
Tumor
-0.6
CPT0026420001
Normal
-0.6
CPT0026410003
Tumor
-0.6
CPT0006530001
Normal
-0.7
CPT0088690003
Tumor
-0.8
CPT0002350011
Tumor
-0.9
CPT0063630003
Tumor
-1.0
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0001180009
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0087040003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0089020003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0086890003
Normal
N/A
CPT0020120003
Tumor
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0069000003
Tumor
N/A
CPT0092160003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0078510003
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0007320003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0079410003
Tumor
N/A
CPT0079510001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0065870003
Tumor
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0088480003
Tumor
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0081990003
Tumor
N/A
CPT0075130003
Tumor
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
