Expression of VTN in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

VTN is validated prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 2578.51

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

4074.6

Number of samples

362

Samples

Sample	Description	TPM
TCGA-DD-A4NN-01A	56 years, female, white, stage:Stage I, dead, 899 days	11950.1
TCGA-UB-A7ME-01A	51 years, male, asian, stage:Stage I, alive, 486 days	10344.6
TCGA-DD-AADY-01A	55 years, female, asian, stage:Stage I, alive, 555 days	9760.1
TCGA-DD-AACS-01A	39 years, male, asian, stage:Stage I, alive, 1804 days	9469.0
TCGA-G3-A5SI-01A	44 years, male, asian, stage:Stage II, dead, 768 days	9467.4
TCGA-ES-A2HS-01A	80 years, male, white, stage:Stage I, dead, 688 days	9286.6
TCGA-KR-A7K2-01A	64 years, male, white, stage:Stage I, alive, 829 days	9210.6
TCGA-2Y-A9H6-01A	68 years, female, white, stage:Stage I, alive, 357 days	9080.4
TCGA-ED-A66Y-01A	51 years, female, asian, stage:Stage IIIA, dead, 296 days	8835.9
TCGA-FV-A496-01A	84 years, female, white, stage:Stage I, alive, 10 days	8823.0
TCGA-G3-A7M8-01A	31 years, male, asian, stage:Stage I, alive, 430 days	8759.5
TCGA-G3-A25Y-01A	52 years, female, asian, stage:Stage I, dead, 452 days	8748.0
TCGA-DD-A11D-01A	57 years, female, white, stage:Stage I, dead, 1560 days	8723.4
TCGA-BC-A217-01A	75 years, female, white, stage:Stage II, dead, 1397 days	8657.8
TCGA-BC-A10Y-01A	76 years, male, white, stage:'--, dead, 711 days	8655.7
TCGA-DD-A11B-01A	73 years, male, white, stage:Stage I, dead, 14 days	8328.2
TCGA-ED-A7PY-01A	20 years, female, asian, stage:Stage II, alive, 390 days	8263.7
TCGA-FV-A23B-01A	70 years, female, white, stage:Stage II, dead, 1852 days	8258.7
TCGA-DD-A3A9-01A	64 years, female, white, stage:Stage IVB, dead, 931 days	8231.9
TCGA-G3-AAV0-01A	58 years, male, asian, stage:Stage I, alive, 476 days	7802.9
TCGA-DD-AACF-01A	68 years, male, asian, stage:Stage I, dead, 365 days	7708.3
TCGA-BC-A5W4-01A	69 years, male, white, stage:Stage IIIA, dead, 547 days	7685.7
TCGA-DD-AAD3-01A	43 years, male, asian, stage:Stage I, alive, 1295 days	7667.5
TCGA-T1-A6J8-01A	68 years, male, white, stage:'--, alive, 23 days	7645.7
TCGA-G3-A25Z-01A	58 years, male, asian, stage:Stage I, alive, 655 days	7640.9
TCGA-CC-5261-01A	44 years, male, asian, stage:Stage II, dead, 97 days	7592.1
TCGA-2Y-A9GU-01A	55 years, female, white, stage:Stage I, alive, 1939 days	7592.0
TCGA-2Y-A9H7-01A	81 years, female, white, stage:Stage I, alive, 1168 days	7570.1
TCGA-BD-A2L6-01A	69 years, male, white, stage:'--, alive, 1363 days	7562.8
TCGA-2Y-A9H9-01A	70 years, male, white, stage:Stage I, alive, 697 days	7531.4
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:Stage I, alive, 1900 days	7523.5
TCGA-DD-AADP-01A	45 years, male, asian, stage:Stage I, alive, 458 days	7476.1
TCGA-CC-A8HS-01A	18 years, male, asian, stage:Stage IIIC, dead, 300 days	7455.3
TCGA-DD-A4NO-01A	65 years, male, white, stage:Stage I, alive, 2245 days	7302.8
TCGA-CC-5259-01A	60 years, female, asian, stage:Stage IIIC, alive, 250 days	7291.6
TCGA-2Y-A9H8-01A	85 years, female, white, stage:'--, dead, 633 days	7230.7
TCGA-5C-A9VH-01A	70 years, male, white, stage:Stage I, alive, 322 days	7213.1
TCGA-DD-A3A5-01A	66 years, female, white, stage:Stage III, dead, 3125 days	7193.4
TCGA-DD-AAE7-01A	72 years, male, asian, stage:Stage I, alive, 644 days	7176.1
TCGA-DD-AACU-01A	59 years, male, asian, stage:Stage I, alive, 1567 days	7161.9
TCGA-DD-AAD1-01A	51 years, female, asian, stage:Stage I, alive, 564 days	7121.3
TCGA-EP-A2KA-01A	52 years, female, white, stage:Stage IIIA, dead, 627 days	7086.4
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:Stage IIIB, alive, 396 days	7067.6
TCGA-DD-AADV-01A	50 years, male, asian, stage:Stage I, alive, 574 days	6959.3
TCGA-DD-AAVS-01A	56 years, male, asian, stage:Stage I, alive, 1823 days	6924.9
TCGA-ZP-A9D0-01A	67 years, female, black or african american, stage:'--, alive, 1091 days	6886.9
TCGA-DD-A4ND-01A	56 years, female, white, stage:Stage I, alive, 2746 days	6778.3
TCGA-DD-AAEI-01A	72 years, male, asian, stage:Stage I, alive, 1531 days	6736.9
TCGA-DD-AADW-01A	48 years, male, asian, stage:Stage I, alive, 587 days	6692.9
TCGA-DD-AADI-01A	43 years, female, asian, stage:Stage I, alive, 1085 days	6686.5
TCGA-FV-A3R3-01A	38 years, female, white, stage:Stage I, dead, 366 days	6545.0
TCGA-DD-A1EI-01A	46 years, male, asian, stage:Stage I, alive, 183 days	6530.9
TCGA-RC-A7S9-01A	47 years, female, asian, stage:Stage I, alive, 640 days	6455.8
TCGA-DD-A1EH-01A	23 years, male, white, stage:Stage III, alive, 1495 days	6449.6
TCGA-K7-A6G5-01A	66 years, male, white, stage:Stage I, alive, 512 days	6443.7
TCGA-G3-A3CI-01A	71 years, male, white, stage:Stage I, alive, 180 days	6435.0
TCGA-DD-AADK-01A	68 years, female, asian, stage:Stage II, alive, 1049 days	6422.1
TCGA-XR-A8TG-01A	58 years, male, white, stage:Stage I, alive, 898 days	6412.3
TCGA-ED-A8O5-01A	59 years, female, asian, stage:Stage IIIA, alive, 406 days	6399.7
TCGA-O8-A75V-01A	54 years, male, stage:Stage I, alive, 538 days	6365.0
TCGA-FV-A4ZP-01A	78 years, male, white, stage:Stage IIIA, dead, 2486 days	6348.1
TCGA-UB-A7MA-01A	62 years, female, white, stage:Stage II, alive, 848 days	6330.5
TCGA-DD-A1EB-01A	72 years, female, stage:Stage I, alive, 2017 days	6316.9
TCGA-ZP-A9CY-01A	66 years, female, white, stage:'--, alive, 782 days	6307.6
TCGA-ZP-A9CV-01A	59 years, male, white, stage:'--, dead, 1088 days	6195.6
TCGA-CC-5264-01A	71 years, male, asian, stage:Stage IIIA, dead, 102 days	6169.1
TCGA-G3-A5SJ-01A	59 years, male, white, stage:Stage I, alive, 698 days	6137.7
TCGA-UB-AA0U-01A	60 years, male, white, stage:Stage II, alive, 327 days	6111.7
TCGA-DD-AADA-01A	66 years, female, asian, stage:Stage I, alive, 1233 days	6108.6
TCGA-FV-A3I1-01A	81 years, female, white, stage:Stage II, dead, 247 days	6079.5
TCGA-DD-A113-01A	55 years, female, white, stage:Stage II, alive, 2425 days	6029.7
TCGA-DD-A73C-01A	65 years, female, white, stage:Stage IIIA, alive, 701 days	6003.6
TCGA-DD-AACW-01A	43 years, male, asian, stage:Stage I, alive, 1424 days	5998.7
TCGA-ZP-A9D2-01A	51 years, male, white, stage:'--, dead, 765 days	5976.3
TCGA-ZS-A9CE-01A	79 years, female, white, stage:Stage II, alive, 1241 days	5972.8
TCGA-MR-A520-01A	58 years, male, white, stage:Stage I, alive, 229 days	5971.8
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:Stage I, alive, 2728 days	5967.3
TCGA-DD-A4NP-01A	32 years, male, white, stage:Stage I, alive, 3308 days	5926.6
TCGA-DD-A118-01A	77 years, female, white, stage:Stage II, alive, 3437 days	5896.0
TCGA-ED-A4XI-01A	58 years, male, asian, stage:Stage II, alive, 819 days	5845.1
TCGA-DD-AADJ-01A	70 years, female, asian, stage:Stage I, alive, 1066 days	5831.5
TCGA-HP-A5N0-01A	90 years, female, stage:'--, dead, 752 days	5824.3
TCGA-RC-A7SK-01A	59 years, male, asian, stage:Stage I, alive, 472 days	5821.0
TCGA-DD-A73F-01A	77 years, female, white, stage:Stage I, alive, 1085 days	5768.4
TCGA-DD-A11C-01A	69 years, male, white, stage:Stage I, alive, 662 days	5733.1
TCGA-BC-A10S-01A	81 years, male, white, stage:'--, dead, 1423 days	5709.3
TCGA-FV-A2QR-01A	75 years, male, white, stage:Stage I, dead, 581 days	5708.7
TCGA-ED-A66X-01A	35 years, male, asian, stage:Stage IIIA, alive, 406 days	5704.4
TCGA-ED-A7XO-01A	29 years, male, asian, stage:Stage IIIA, alive, 427 days	5683.4
TCGA-EP-A2KB-01A	46 years, female, white, stage:Stage I, dead, 596 days	5639.6
TCGA-2Y-A9GT-01A	51 years, male, white, stage:Stage I, dead, 1624 days	5626.1
TCGA-2Y-A9H5-01A	59 years, female, white, stage:Stage I, dead, 555 days	5609.9
TCGA-DD-AACY-01A	61 years, male, asian, stage:Stage I, alive, 1450 days	5577.1
TCGA-DD-AACV-01A	53 years, male, asian, stage:Stage I, alive, 1531 days	5534.8
TCGA-DD-AACC-01A	61 years, male, asian, stage:Stage I, dead, 1685 days	5507.2
TCGA-DD-AAVV-01A	56 years, male, asian, stage:Stage II, alive, 2455 days	5458.8
TCGA-G3-A7M5-01A	76 years, male, asian, stage:Stage I, alive, 447 days	5453.3
TCGA-DD-AAE1-01A	52 years, male, asian, stage:Stage I, alive, 552 days	5443.9
TCGA-CC-A9FS-01A	55 years, male, asian, stage:Stage II, alive, 211 days	5433.8
TCGA-ED-A8O6-01A	50 years, female, asian, stage:Stage IIIA, dead, 56 days	5361.3
TCGA-DD-A73D-01A	68 years, female, white, stage:Stage II, alive, 693 days	5341.5
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:Stage IIIA, alive, 20 days	5310.6
TCGA-DD-AACN-01A	32 years, male, asian, stage:Stage I, alive, 1302 days	5309.3
TCGA-XR-A8TC-01A	43 years, female, white, stage:Stage I, alive, 1339 days	5308.8
TCGA-K7-A5RF-01A	64 years, male, white, stage:Stage I, alive, 631 days	5267.4
TCGA-5R-AAAM-01A	65 years, female, white, stage:Stage II, dead, 46 days	5218.3
TCGA-BD-A3EP-01A	75 years, female, black or african american, stage:Stage I, alive, 409 days	5123.5
TCGA-2Y-A9GS-01A	58 years, male, white, stage:'--, dead, 724 days	5119.7
TCGA-MI-A75G-01A	63 years, male, white, stage:Stage II, alive, 698 days	5104.4
TCGA-DD-A4NL-01A	46 years, male, white, stage:Stage I, alive, 1711 days	5067.5
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:Stage I, dead, 19 days	5062.0
TCGA-2Y-A9H3-01A	45 years, male, white, stage:Stage II, alive, 1516 days	5000.0
TCGA-G3-AAUZ-01A	48 years, male, stage:Stage I, alive, 480 days	4976.4
TCGA-ZP-A9D1-01A	56 years, female, white, stage:'--, alive, 21 days	4963.2
TCGA-ZP-A9CZ-01A	72 years, male, asian, stage:'--, alive, 706 days	4951.3
TCGA-DD-AAD2-01A	66 years, male, asian, stage:Stage I, alive, 658 days	4934.9
TCGA-2Y-A9GV-01A	54 years, female, white, stage:Stage I, dead, 2532 days	4880.7
TCGA-DD-AAW0-01A	54 years, male, asian, stage:Stage I, alive, 2015 days	4875.0
TCGA-BC-A69I-01A	69 years, male, white, stage:Stage I, alive, 387 days	4857.4
TCGA-DD-A73B-01A	72 years, female, white, stage:Stage I, dead, 283 days	4839.9
TCGA-G3-A7M7-01A	65 years, male, white, stage:Stage I, alive, 361 days	4820.7
TCGA-DD-A115-01A	53 years, male, white, stage:Stage IIIA, dead, 2542 days	4811.3
TCGA-G3-A6UC-01A	65 years, male, white, stage:Stage IIIB, alive, 671 days	4798.4
TCGA-G3-A5SM-01A	58 years, male, white, stage:Stage II, alive, 520 days	4751.4
TCGA-G3-A25V-01A	68 years, male, white, stage:Stage I, alive, 860 days	4719.1
TCGA-DD-A4NK-01A	80 years, female, white, stage:Stage IIIA, dead, 1210 days	4713.9
TCGA-DD-A73A-01A	71 years, male, white, stage:Stage I, alive, 728 days	4707.8
TCGA-BC-A216-01A	62 years, female, white, stage:Stage IIIA, alive, 1351 days	4696.8
TCGA-CC-A3MC-01A	54 years, male, asian, stage:Stage IIIA, alive, 363 days	4666.6
TCGA-DD-AADS-01A	63 years, male, asian, stage:Stage I, alive, 474 days	4643.1
TCGA-UB-A7MC-01A	59 years, male, white, stage:Stage IIIA, alive, 500 days	4638.8
TCGA-2Y-A9HB-01A	66 years, male, stage:Stage I, alive, 260 days	4630.1
TCGA-DD-AAEA-01A	65 years, male, asian, stage:Stage I, alive, 575 days	4601.8
TCGA-PD-A5DF-01A	58 years, female, white, stage:Stage IIIB, dead, 639 days	4561.1
TCGA-UB-A7MF-01A	56 years, male, white, stage:Stage IIIA, dead, 214 days	4546.4
TCGA-FV-A2QQ-01A	80 years, male, white, stage:Stage I, alive, 729 days	4534.8
TCGA-DD-AAVW-01A	35 years, male, asian, stage:Stage I, alive, 2317 days	4525.1
TCGA-CC-A9FW-01A	68 years, male, asian, stage:Stage IIIA, alive, 248 days	4513.7
TCGA-DD-AAC9-01A	51 years, male, asian, stage:Stage I, alive, 347 days	4487.1
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:Stage II, dead, 848 days	4468.3
TCGA-DD-A1EJ-01A	71 years, female, white, stage:Stage IIIC, dead, 1005 days	4427.6
TCGA-DD-A3A3-01A	45 years, male, asian, stage:Stage I, dead, 535 days	4427.4
TCGA-DD-A73G-01A	73 years, female, white, stage:Stage I, alive, 3478 days	4406.0
TCGA-DD-AAD8-01A	73 years, female, asian, stage:Stage I, alive, 1219 days	4402.5
TCGA-XR-A8TF-01A	74 years, male, white, stage:Stage I, dead, 693 days	4373.1
TCGA-BC-A10X-01A	52 years, female, white, stage:Stage IIIA, dead, 770 days	4347.2
TCGA-CC-A7IL-01A	61 years, male, asian, stage:Stage IIIA, dead, 278 days	4335.2
TCGA-WX-AA46-01A	61 years, male, white, stage:Stage II, alive, 756 days	4334.3
TCGA-FV-A3R2-01A	75 years, male, white, stage:Stage I, dead, 194 days	4318.7
TCGA-DD-AAEH-01A	73 years, male, asian, stage:Stage I, alive, 784 days	4297.7
TCGA-DD-AACJ-01A	75 years, male, asian, stage:Stage II, alive, 2102 days	4288.8
TCGA-DD-A39Z-01A	43 years, female, stage:Stage II, dead, 601 days	4278.3
TCGA-DD-AAEE-01A	55 years, male, asian, stage:Stage I, alive, 810 days	4275.3
TCGA-BC-A110-01A	51 years, female, black or african american, stage:'--, dead, 2116 days	4263.9
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:Stage II, alive, 6 days	4258.4
TCGA-2Y-A9GW-01A	64 years, male, white, stage:Stage I, dead, 1271 days	4222.8
TCGA-4R-AA8I-01A	66 years, male, white, stage:Stage II, dead, 262 days	4210.3
TCGA-UB-A7MB-01A	24 years, male, white, stage:Stage II, alive, 601 days	4198.9
TCGA-DD-AACI-01A	69 years, male, asian, stage:Stage II, alive, 1618 days	4148.4
TCGA-5C-AAPD-01A	61 years, male, asian, stage:Stage II, alive, 20 days	4147.4
TCGA-DD-AADG-01A	70 years, male, asian, stage:Stage IIIA, alive, 1145 days	4145.7
TCGA-ZS-A9CF-01A	64 years, male, white, stage:Stage II, alive, 2412 days	4139.6
TCGA-GJ-A9DB-01A	68 years, male, white, stage:Stage I, dead, 67 days	4135.0
TCGA-LG-A9QD-01A	68 years, male, white, stage:Stage IIIA, alive, 366 days	4087.4
TCGA-DD-AACK-01A	70 years, male, asian, stage:Stage I, alive, 9 days	4076.3
TCGA-CC-A3MB-01A	36 years, male, asian, stage:Stage IIIA, dead, 315 days	4072.5
TCGA-ZS-A9CD-01A	73 years, male, white, stage:Stage II, dead, 1386 days	4056.2
TCGA-LG-A6GG-01A	79 years, female, white, stage:Stage II, alive, 387 days	4047.6
TCGA-G3-A3CH-01A	53 years, male, asian, stage:Stage IIIA, alive, 780 days	4036.0
TCGA-DD-AADD-01A	51 years, male, asian, stage:Stage I, alive, 1231 days	4026.9
TCGA-RC-A7SF-01A	66 years, male, asian, stage:Stage I, alive, 579 days	4018.2
TCGA-DD-AAE2-01A	51 years, male, asian, stage:Stage I, alive, 638 days	4013.6
TCGA-DD-A1EK-01A	64 years, female, white, stage:Stage IVB, dead, 558 days	4004.2
TCGA-FV-A495-01A	51 years, female, white, stage:Stage II, alive, 1 days	3966.0
TCGA-MI-A75E-01A	61 years, male, white, stage:Stage IIIC, alive, 507 days	3964.8
TCGA-DD-A4NV-01A	61 years, male, white, stage:Stage IIIA, alive, 2398 days	3954.3
TCGA-NI-A4U2-01A	71 years, male, white, stage:Stage IIIA, dead, 1791 days	3908.0
TCGA-G3-A7M6-01A	60 years, female, white, stage:Stage I, alive, 632 days	3903.5
TCGA-MI-A75I-01A	61 years, male, black or african american, stage:'--, alive, 630 days	3902.4
TCGA-DD-AACH-01A	69 years, male, asian, stage:Stage II, dead, 195 days	3887.9
TCGA-UB-AA0V-01A	69 years, female, white, stage:Stage I, alive, 314 days	3874.9
TCGA-DD-AAED-01A	51 years, male, asian, stage:Stage I, alive, 763 days	3856.2
TCGA-DD-AADM-01A	58 years, male, asian, stage:Stage II, dead, 12 days	3817.1
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:Stage I, alive, 1452 days	3812.6
TCGA-DD-AADC-01A	53 years, male, asian, stage:Stage I, dead, 425 days	3794.5
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:Stage I, dead, 438 days	3700.2
TCGA-DD-AAEK-01A	51 years, male, asian, stage:Stage II, alive, 1067 days	3700.0
TCGA-GJ-A6C0-01A	75 years, female, white, stage:Stage II, dead, 31 days	3693.6
TCGA-DD-A4NJ-01A	54 years, female, white, stage:Stage II, alive, 928 days	3657.8
TCGA-RC-A6M4-01A	74 years, female, white, stage:Stage IIIA, alive, 22 days	3648.7
TCGA-DD-A3A2-01A	76 years, female, white, stage:Stage I, dead, 2131 days	3647.5
TCGA-ED-A627-01A	74 years, male, white, stage:Stage I, alive, 423 days	3641.1
TCGA-WQ-AB4B-01A	62 years, male, white, stage:Stage II, alive, 395 days	3623.7
TCGA-DD-AAEG-01A	59 years, female, asian, stage:Stage I, alive, 719 days	3617.6
TCGA-BC-A112-01A	80 years, male, white, stage:'--, dead, 153 days	3605.6
TCGA-DD-AAVX-01A	38 years, male, asian, stage:Stage II, alive, 1718 days	3583.2
TCGA-BC-A69H-01A	64 years, male, white, stage:Stage II, alive, 444 days	3576.3
TCGA-CC-5263-01A	35 years, male, asian, stage:Stage IIIA, dead, 129 days	3526.6
TCGA-G3-A25X-01A	73 years, male, asian, stage:Stage II, alive, 1779 days	3518.8
TCGA-BD-A3ER-01A	62 years, male, white, stage:Stage II, alive, 1115 days	3489.8
TCGA-DD-A1EG-01A	76 years, male, white, stage:Stage I, dead, 1372 days	3470.4
TCGA-DD-A3A8-01A	75 years, male, white, stage:Stage II, dead, 11 days	3469.9
TCGA-EP-A3JL-01A	76 years, male, white, stage:Stage I, alive, 303 days	3462.1
TCGA-CC-A8HV-01A	51 years, female, asian, stage:Stage II, dead, 279 days	3459.0
TCGA-DD-AACO-01A	40 years, male, asian, stage:Stage I, alive, 1876 days	3447.2
TCGA-G3-A5SK-01A	58 years, male, white, stage:Stage I, alive, 744 days	3435.8
TCGA-BC-A8YO-01A	66 years, female, white, stage:Stage IIIC, alive, 562 days	3421.0
TCGA-G3-AAV5-01A	67 years, male, white, stage:Stage II, alive, 354 days	3393.7
TCGA-RC-A6M6-01A	75 years, male, white, stage:Stage II, alive, 9 days	3390.3
TCGA-DD-AAVR-01A	44 years, male, asian, stage:Stage I, alive, 2513 days	3354.6
TCGA-DD-A3A1-01A	65 years, male, stage:Stage IIIA, dead, 233 days	3353.5
TCGA-DD-AAD0-01A	73 years, female, asian, stage:Stage I, alive, 137 days	3338.3
TCGA-DD-AAE3-01A	50 years, male, asian, stage:Stage I, alive, 566 days	3335.8
TCGA-CC-A7IH-01A	58 years, male, asian, stage:Stage IIIA, alive, 365 days	3302.9
TCGA-RC-A7SH-01A	42 years, male, asian, stage:Stage II, alive, 468 days	3300.8
TCGA-ZP-A9D4-01A	64 years, female, white, stage:'--, alive, 395 days	3294.6
TCGA-CC-A5UE-01A	48 years, male, asian, stage:Stage IIIB, dead, 272 days	3292.1
TCGA-DD-AAVU-01A	46 years, male, asian, stage:Stage II, alive, 2202 days	3283.4
TCGA-CC-A7IF-01A	59 years, male, asian, stage:Stage IIIA, dead, 649 days	3272.0
TCGA-DD-A1EC-01A	20 years, female, white, stage:Stage I, alive, 602 days	3267.6
TCGA-WJ-A86L-01A	68 years, female, white, stage:Stage I, alive, 345 days	3244.0
TCGA-BC-A3KF-01A	66 years, female, white, stage:Stage I, alive, 8 days	3222.3
TCGA-DD-A1EF-01A	57 years, female, white, stage:Stage I, dead, 394 days	3220.7
TCGA-CC-A123-01A	24 years, female, asian, stage:Stage IIIA, alive, 219 days	3219.4
TCGA-DD-AADR-01A	58 years, male, asian, stage:Stage I, alive, 2028 days	3207.1
TCGA-BC-A10R-01A	66 years, female, white, stage:'--, dead, 308 days	3189.7
TCGA-DD-A4NR-01A	85 years, female, white, stage:Stage I, dead, 9 days	3181.4
TCGA-DD-A1ED-01A	68 years, male, white, stage:Stage I, alive, 2301 days	3178.1
TCGA-EP-A12J-01A	62 years, male, black or african american, stage:Stage I, alive, 570 days	3174.0
TCGA-DD-A116-01A	68 years, male, asian, stage:Stage IIIA, dead, 1622 days	3168.9
TCGA-2Y-A9GX-01A	68 years, male, white, stage:Stage I, alive, 2442 days	3157.4
TCGA-2Y-A9H0-01A	49 years, male, white, stage:Stage IIIA, alive, 3675 days	3147.9
TCGA-DD-A4NI-01A	67 years, male, white, stage:Stage II, alive, 816 days	3109.4
TCGA-DD-AADQ-01A	59 years, male, asian, stage:Stage II, alive, 436 days	3060.8
TCGA-KR-A7K7-01A	61 years, female, white, stage:Stage II, alive, 951 days	2989.2
TCGA-G3-A5SL-01A	70 years, male, white, stage:Stage II, alive, 621 days	2974.0
TCGA-EP-A26S-01A	70 years, male, white, stage:Stage I, alive, 608 days	2968.3
TCGA-DD-A4NS-01A	61 years, female, white, stage:Stage I, dead, 2456 days	2932.7
TCGA-HP-A5MZ-01A	78 years, male, stage:Stage I, dead, 91 days	2927.7
TCGA-DD-A3A7-01A	67 years, male, stage:Stage IIIB, dead, 419 days	2924.8
TCGA-DD-AAE6-01A	59 years, female, asian, stage:Stage I, alive, 141 days	2910.5
TCGA-WX-AA44-01A	64 years, female, white, stage:Stage I, alive, 615 days	2895.2
TCGA-DD-A119-01A	40 years, male, asian, stage:Stage IV, dead, 223 days	2882.7
TCGA-2Y-A9HA-01A	70 years, male, white, stage:Stage II, dead, 36 days	2880.8
TCGA-DD-AACE-01A	62 years, male, asian, stage:Stage I, alive, 2184 days	2839.8
TCGA-RC-A7SB-01A	53 years, male, asian, stage:Stage II, alive, 588 days	2801.5
TCGA-DD-A1EA-01A	68 years, male, asian, stage:Stage II, alive, 2415 days	2792.2
TCGA-DD-AAW2-01A	69 years, male, asian, stage:Stage I, alive, 1855 days	2786.3
TCGA-DD-AACT-01A	69 years, female, asian, stage:Stage I, alive, 1562 days	2782.7
TCGA-DD-AAVY-01A	56 years, male, asian, stage:Stage IIIA, alive, 1970 days	2780.2
TCGA-2Y-A9H1-01A	58 years, male, white, stage:Stage I, dead, 1229 days	2751.1
TCGA-DD-AAE4-01A	49 years, female, asian, stage:Stage I, alive, 608 days	2735.1
TCGA-DD-A114-01A	42 years, male, black or african american, stage:Stage II, dead, 1149 days	2728.9
TCGA-NI-A8LF-01A	74 years, male, white, stage:Stage I, alive, 799 days	2683.2
TCGA-DD-AAW3-01A	69 years, male, asian, stage:Stage I, alive, 1633 days	2675.7
TCGA-G3-A7M9-01A	70 years, male, white, stage:Stage IIIB, dead, 56 days	2658.0
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:Stage II, alive, 94 days	2641.5
TCGA-G3-AAV2-01A	50 years, male, white, stage:Stage I, alive, 372 days	2609.8
TCGA-ED-A5KG-01A	60 years, female, asian, stage:Stage II, alive, 854 days	2597.0
TCGA-DD-AADO-01A	55 years, male, asian, stage:Stage I, alive, 453 days	2582.5
TCGA-BC-A10W-01A	50 years, male, asian, stage:'--, dead, 91 days	2574.5
TCGA-DD-AACQ-01A	50 years, male, asian, stage:Stage II, dead, 432 days	2562.0
TCGA-DD-AAE0-01A	45 years, female, asian, stage:Stage IIIA, alive, 555 days	2559.0
TCGA-ED-A7XP-01A	53 years, female, asian, stage:Stage II, alive, 400 days	2553.9
TCGA-BC-A10T-01A	76 years, male, white, stage:'--, dead, 837 days	2538.6
TCGA-CC-5258-01A	48 years, male, asian, stage:Stage II, dead, 129 days	2537.8
TCGA-CC-A8HU-01A	39 years, female, asian, stage:Stage IIIA, dead, 344 days	2526.6
TCGA-DD-AACP-01A	64 years, male, asian, stage:Stage I, alive, 415 days	2510.6
TCGA-GJ-A3OU-01A	59 years, male, white, stage:Stage I, alive, 879 days	2489.8
TCGA-MI-A75C-01A	64 years, male, white, stage:Stage I, alive, 291 days	2473.8
TCGA-DD-A4NQ-01A	60 years, male, white, stage:Stage II, dead, 373 days	2412.7
TCGA-DD-A4NE-01A	75 years, female, white, stage:Stage IIIA, dead, 660 days	2409.3
TCGA-ZS-A9CG-01A	55 years, male, white, stage:Stage II, alive, 341 days	2377.5
TCGA-KR-A7K8-01A	57 years, male, stage:Stage I, alive, 906 days	2369.2
TCGA-G3-A25S-01A	64 years, male, white, stage:Stage I, dead, 416 days	2367.0
TCGA-XR-A8TD-01A	49 years, female, white, stage:Stage IIIB, alive, 1030 days	2364.3
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:Stage I, alive, 519 days	2358.0
TCGA-DD-A4NH-01A	65 years, female, white, stage:Stage IIIB, alive, 917 days	2346.4
TCGA-RC-A6M5-01A	20 years, female, white, stage:Stage IVA, alive, 15 days	2346.1
TCGA-DD-AADL-01A	58 years, male, asian, stage:Stage I, alive, 636 days	2339.5
TCGA-DD-AADB-01A	51 years, male, asian, stage:Stage I, alive, 1242 days	2338.6
TCGA-BC-A10Z-01A	62 years, female, white, stage:Stage I, dead, 34 days	2330.7
TCGA-DD-AADF-01A	64 years, female, asian, stage:Stage I, dead, 115 days	2310.3
TCGA-EP-A3RK-01A	73 years, male, white, stage:Stage IIIA, alive, 363 days	2273.0
TCGA-DD-A39X-01A	78 years, female, white, stage:Stage I, dead, 1694 days	2256.1
TCGA-CC-A7IG-01A	47 years, male, asian, stage:Stage II, dead, 299 days	2247.5
TCGA-5C-A9VG-01A	58 years, male, white, stage:Stage II, alive, 328 days	2239.9
TCGA-KR-A7K0-01A	65 years, male, white, stage:Stage I, dead, 65 days	2236.1
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:Stage I, dead, 52 days	2223.1
TCGA-CC-A5UC-01A	63 years, male, asian, stage:Stage IIIA, dead, 347 days	2216.2
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	2197.6
TCGA-LG-A9QC-01A	48 years, male, white, stage:Stage I, alive, 425 days	2192.0
TCGA-BC-A3KG-01A	68 years, female, white, stage:Stage II, alive, 680 days	2175.6
TCGA-G3-A3CK-01A	61 years, male, asian, stage:Stage I, alive, 585 days	2174.0
TCGA-CC-5262-01A	67 years, male, asian, stage:Stage IIIC, dead, 103 days	2130.3
TCGA-ED-A459-01A	47 years, male, asian, stage:Stage II, alive, 910 days	2084.0
TCGA-BC-A10U-01A	69 years, male, white, stage:'--, dead, 837 days	1986.3
TCGA-K7-AAU7-01A	61 years, male, white, stage:Stage II, alive, 359 days	1954.9
TCGA-G3-A25U-01A	63 years, female, asian, stage:Stage I, alive, 1636 days	1910.0
TCGA-DD-AACZ-01A	63 years, female, asian, stage:Stage I, dead, 171 days	1892.3
TCGA-DD-AACD-01A	48 years, male, asian, stage:Stage I, dead, 381 days	1840.3
TCGA-DD-A4NB-01A	25 years, male, white, stage:Stage I, alive, 989 days	1829.2
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:Stage II, alive, 1098 days	1819.0
TCGA-DD-AACG-01A	52 years, male, asian, stage:Stage II, dead, 469 days	1800.2
TCGA-DD-AAW1-01A	55 years, male, asian, stage:Stage IIIA, alive, 1989 days	1782.8
TCGA-DD-AAEB-01A	60 years, male, asian, stage:Stage I, alive, 478 days	1755.5
TCGA-DD-AADU-01A	60 years, male, asian, stage:Stage II, alive, 554 days	1754.4
TCGA-DD-AADN-01A	59 years, male, asian, stage:Stage I, alive, 898 days	1750.9
TCGA-G3-AAV6-01A	53 years, female, white, stage:Stage IIIA, dead, 65 days	1745.2
TCGA-CC-A7IK-01A	59 years, male, asian, stage:Stage IIIA, dead, 262 days	1709.7
TCGA-MI-A75H-01A	77 years, male, white, stage:'--, alive, 747 days	1699.9
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:Stage I, alive, 12 days	1694.6
TCGA-G3-AAV1-01A	51 years, male, asian, stage:Stage IIIC, dead, 359 days	1679.3
TCGA-DD-A4NA-01A	67 years, female, white, stage:Stage IIIC, alive, 1008 days	1637.2
TCGA-2Y-A9GY-01A	64 years, female, white, stage:Stage II, dead, 757 days	1545.9
TCGA-DD-A39V-01A	77 years, male, white, stage:Stage II, dead, 643 days	1534.7
TCGA-WX-AA47-01A	33 years, female, white, stage:Stage IIIA, dead, 556 days	1512.8
TCGA-DD-A1EE-01A	73 years, male, white, stage:Stage IIIA, dead, 349 days	1474.0
TCGA-CC-A7IE-01A	57 years, male, asian, stage:Stage IIIA, dead, 217 days	1441.1
TCGA-5R-AA1D-01A	17 years, female, white, stage:Stage IIIA, alive, 449 days	1434.3
TCGA-XR-A8TE-01A	16 years, male, white, stage:Stage IIIA, alive, 925 days	1434.1
TCGA-DD-AAE9-01A	69 years, male, asian, stage:Stage I, alive, 722 days	1431.6
TCGA-DD-AAVP-01A	48 years, male, asian, stage:Stage I, alive, 2752 days	1425.1
TCGA-G3-AAV3-01A	58 years, female, white, stage:Stage II, alive, 412 days	1388.3
TCGA-ED-A97K-01A	54 years, male, asian, stage:Stage IIIA, alive, 6 days	1363.7
TCGA-DD-AAD6-01A	66 years, male, asian, stage:Stage IIIA, alive, 672 days	1337.5
TCGA-DD-A3A4-01A	37 years, male, white, stage:Stage IIIA, dead, 612 days	1282.6
TCGA-DD-A4NG-01A	77 years, male, white, stage:Stage IIIA, dead, 802 days	1254.0
TCGA-G3-AAV4-01A	83 years, female, white, stage:Stage I, dead, 27 days	1245.3
TCGA-DD-AACA-01A	65 years, male, asian, stage:Stage I, alive, 2301 days	1189.3
TCGA-G3-A3CG-01A	80 years, male, white, stage:Stage I, alive, 673 days	1189.1
TCGA-CC-A8HT-01A	74 years, male, asian, stage:Stage IIIA, dead, 140 days	1168.8
TCGA-G3-A25T-01A	45 years, female, white, stage:Stage IIIA, alive, 1553 days	1002.8
TCGA-DD-AACB-01A	74 years, female, asian, stage:Stage I, alive, 2324 days	975.0
TCGA-G3-AAV7-01A	38 years, male, asian, stage:Stage II, alive, 361 days	954.5
TCGA-DD-A73E-01A	66 years, male, white, stage:Stage I, alive, 44 days	904.5
TCGA-2Y-A9H2-01A	64 years, female, white, stage:Stage I, alive, 1731 days	894.2
TCGA-DD-A4NF-01A	72 years, male, white, stage:Stage I, alive, 942 days	877.6
TCGA-DD-AACX-01A	66 years, male, asian, stage:Stage II, alive, 170 days	843.7
TCGA-DD-A39W-01A	29 years, female, white, stage:Stage III, dead, 827 days	789.8
TCGA-WQ-A9G7-01A	71 years, female, white, stage:'--, alive, 30 days	760.2
TCGA-CC-A3MA-01A	61 years, male, asian, stage:Stage IIIA, dead, 303 days	719.0
TCGA-CC-5260-01A	61 years, female, asian, stage:Stage IIIC, dead, 87 days	712.6
TCGA-CC-A7II-01A	54 years, male, asian, stage:Stage IIIA, alive, 399 days	706.5
TCGA-DD-AACL-01A	66 years, female, asian, stage:Stage I, dead, 107 days	702.3
TCGA-BC-A10Q-01A	72 years, female, white, stage:'--, dead, 1135 days	695.3
TCGA-CC-A5UD-01A	45 years, male, asian, stage:Stage IIIA, dead, 304 days	684.4
TCGA-ED-A7PX-01A	48 years, female, asian, stage:Stage II, alive, 6 days	623.3
TCGA-DD-AAC8-01A	72 years, male, asian, stage:Stage I, dead, 16 days	607.8
TCGA-ED-A82E-01A	60 years, female, asian, stage:Stage IIIA, alive, 408 days	578.1
TCGA-DD-A39Y-01A	67 years, male, asian, stage:Stage I, dead, 171 days	562.9
TCGA-5R-AA1C-01A	57 years, male, white, stage:Stage II, alive, 520 days	540.2
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:Stage II, dead, 415 days	510.0
TCGA-CC-A1HT-01A	50 years, male, asian, stage:Stage IIIA, dead, 101 days	427.2
TCGA-MR-A8JO-01A	34 years, male, white, stage:Stage I, alive, 330 days	386.8
TCGA-DD-AA3A-01A	81 years, female, white, stage:Stage I, dead, 410 days	326.3
TCGA-DD-AAD5-01A	54 years, male, asian, stage:Stage I, alive, 1345 days	261.7
TCGA-YA-A8S7-01A	68 years, male, white, stage:Stage IIIA, dead, 412 days	221.5
TCGA-FV-A3I0-01A	76 years, female, white, stage:Stage II, alive, 848 days	190.7
TCGA-DD-A3A6-01A	72 years, female, white, stage:Stage II, dead, 3258 days	9.7
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:Stage II, alive, 382 days	2.8
TCGA-CC-A3M9-01A	45 years, male, asian, stage:Stage IIIA, dead, 300 days	2.2
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ

& Survival analysisⁱ

VTN is validated prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (validation)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 1842.78

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

2989.4

Number of samples

231

Samples

Sample	Description	TPM
DO50855	47 years, male, NA, stage:2, alive, 570 days	7688.0
DO45121	61 years, male, NA, stage:3, alive, 1530 days	7599.9
DO23550	69 years, male, NA, stage:1, alive, 990 days	7268.3
DO45183	72 years, female, NA, stage:2, dead, 570 days	7004.4
DO45205	67 years, female, NA, stage:2, dead, 90 days	6916.9
DO50832	73 years, male, NA, stage:3, alive, 90 days	6866.1
DO48717	54 years, male, NA, stage:4, dead, 180 days	6821.2
DO50807	67 years, male, NA, stage:1, alive, 540 days	6171.6
DO45137	38 years, male, NA, stage:1, alive, 1320 days	5916.8
DO50820	77 years, female, NA, stage:3, alive, 510 days	5855.1
DO48715	58 years, female, NA, stage:2, dead, 690 days	5626.5
DO23512	60 years, male, NA, stage:1, alive, 1260 days	5575.9
DO45191	61 years, female, NA, stage:2, alive, 1200 days	5506.3
DO45111	74 years, male, NA, stage:2, alive, 1590 days	5491.0
DO48736	76 years, female, NA, stage:1, alive, 600 days	5445.3
DO45159	65 years, male, NA, stage:3, alive, 1470 days	5415.2
DO23552	80 years, female, NA, stage:1, alive, 810 days	5320.8
DO45233	83 years, male, NA, stage:3, alive, 900 days	5200.3
DO48760	70 years, female, NA, stage:2, alive, 690 days	5139.0
DO45094	76 years, male, NA, stage:3, alive, 1650 days	5052.6
DO48725	66 years, male, NA, stage:1, alive, 780 days	5009.1
DO50799	66 years, female, NA, stage:2, alive, 540 days	4887.6
DO45185	89 years, male, NA, stage:2, alive, 600 days	4883.9
DO50818	65 years, male, NA, stage:2, alive, 510 days	4872.7
DO48701	78 years, male, NA, stage:2, alive, 780 days	4864.2
DO45243	74 years, female, NA, stage:3, alive, 930 days	4850.3
DO23525	71 years, male, NA, stage:4, alive, 1050 days	4828.0
DO23528	45 years, female, NA, stage:2, alive, 1020 days	4747.0
DO48761	55 years, male, NA, stage:2, alive, 870 days	4714.6
DO23526	66 years, male, NA, stage:3, alive, 1050 days	4686.1
DO45099	46 years, male, NA, stage:3, alive, 1590 days	4676.5
DO50776	75 years, male, NA, stage:1, alive, 690 days	4652.4
DO50825	70 years, male, NA, stage:2, alive, 390 days	4628.9
DO23534	60 years, male, NA, stage:2, alive, 840 days	4613.3
DO45207	68 years, male, NA, stage:1, alive, 1050 days	4589.8
DO45167	67 years, male, NA, stage:2, dead, 1440 days	4587.5
DO48674	80 years, male, NA, stage:2, alive, 1260 days	4576.7
DO45179	78 years, female, NA, stage:2, alive, 600 days	4561.1
DO50819	72 years, female, NA, stage:2, alive, 510 days	4558.3
DO23518	67 years, male, NA, stage:2, alive, 1320 days	4558.3
DO45263	67 years, male, NA, stage:3, dead, 270 days	4548.2
DO45193	68 years, female, NA, stage:4, dead, 120 days	4507.4
DO45213	58 years, male, NA, stage:1, alive, 1200 days	4420.2
DO23538	67 years, male, NA, stage:2, alive, 450 days	4395.8
DO50844	75 years, male, NA, stage:4, alive, 300 days	4370.9
DO48712	50 years, male, NA, stage:2, alive, 810 days	4362.0
DO45189	85 years, female, NA, stage:2, alive, 1200 days	4358.8
DO23515	71 years, male, NA, stage:2, alive, 1230 days	4346.1
DO50804	81 years, male, NA, stage:2, alive, 720 days	4310.6
DO23537	79 years, male, NA, stage:2, dead, 900 days	4278.1
DO50845	72 years, male, NA, stage:3, alive, 210 days	4272.4
DO45187	32 years, female, NA, stage:1, alive, 1260 days	4259.9
DO50789	73 years, female, NA, stage:2, alive, 570 days	4256.5
DO48743	69 years, female, NA, stage:2, alive, 570 days	4237.6
DO45109	63 years, male, NA, stage:2, alive, 1590 days	4234.9
DO48732	73 years, male, NA, stage:3, alive, 630 days	4184.6
DO50857	72 years, male, NA, stage:2, alive, 210 days	4165.6
DO48697	64 years, female, NA, stage:2, dead, 810 days	4158.5
DO23544	67 years, male, NA, stage:2, alive, 960 days	4149.0
DO45115	81 years, male, NA, stage:2, alive, 840 days	4119.1
DO48721	58 years, female, NA, stage:1, alive, 900 days	4103.4
DO227643	79 years, male, NA, stage:2, alive, 1260 days	4093.2
DO45265	73 years, male, NA, stage:3, alive, 1020 days	4063.6
DO45273	62 years, male, NA, stage:2, alive, 480 days	4048.8
DO23536	56 years, male, NA, stage:2, alive, 930 days	4023.0
DO48704	68 years, female, NA, stage:3, alive, 750 days	3960.7
DO45149	70 years, female, NA, stage:2, alive, 1260 days	3936.1
DO45101	63 years, male, NA, stage:2, alive, 1680 days	3871.1
DO23527	72 years, male, NA, stage:1, alive, 1050 days	3850.6
DO50774	68 years, female, NA, stage:2, alive, 720 days	3764.1
DO50805	72 years, male, NA, stage:2, alive, 690 days	3751.5
DO48742	76 years, male, NA, stage:2, alive, 600 days	3708.6
DO45143	69 years, male, NA, stage:3, alive, 1290 days	3675.2
DO45173	63 years, male, NA, stage:3, alive, 1170 days	3650.3
DO50783	62 years, male, NA, stage:3, alive, 480 days	3640.7
DO45199	86 years, female, NA, stage:2, alive, 1350 days	3640.3
DO45247	31 years, female, NA, stage:2, alive, 210 days	3609.7
DO48741	64 years, male, NA, stage:3, alive, 240 days	3591.8
DO45195	62 years, male, NA, stage:1, alive, 390 days	3568.5
DO50813	56 years, male, NA, stage:2, alive, 420 days	3547.2
DO48733	72 years, male, NA, stage:2, alive, 600 days	3521.8
DO45123	78 years, female, NA, stage:2, dead, 570 days	3504.5
DO45255	81 years, male, NA, stage:3, alive, 720 days	3475.1
DO48737	52 years, male, NA, stage:1, alive, 720 days	3460.4
DO48746	76 years, male, NA, stage:3, alive, 570 days	3444.9
DO45105	61 years, male, NA, stage:1, alive, 1680 days	3438.0
DO45229	74 years, male, NA, stage:1, alive, 990 days	3390.4
DO23533	61 years, male, NA, stage:2, alive, 900 days	3382.1
DO45215	65 years, male, NA, stage:2, alive, 1170 days	3378.9
DO45096	69 years, male, NA, stage:2, dead, 1290 days	3337.7
DO45257	46 years, male, NA, stage:3, alive, 810 days	3335.5
DO48727	81 years, female, NA, stage:2, dead, 390 days	3317.9
DO45107	63 years, female, NA, stage:2, alive, 1710 days	3270.9
DO45095	66 years, male, NA, stage:2, alive, 1620 days	3262.8
DO45201	49 years, male, NA, stage:1, alive, 900 days	3241.4
DO227801	77 years, female, NA, stage:1, alive, 660 days	3239.6
DO48757	68 years, female, NA, stage:3, alive, 480 days	3236.2
DO50816	63 years, male, NA, stage:2, alive, 390 days	3219.0
DO45231	84 years, male, NA, stage:2, alive, 930 days	3200.0
DO45141	73 years, male, NA, stage:2, alive, 1320 days	3196.3
DO45181	84 years, female, NA, stage:2, alive, 1200 days	3195.9
DO50850	74 years, male, NA, stage:3, alive, 720 days	3183.8
DO50787	63 years, male, NA, stage:3, alive, 480 days	3179.1
DO23532	71 years, female, NA, stage:1, alive, 960 days	3141.1
DO23517	62 years, male, NA, stage:2, alive, 1200 days	3128.3
DO23516	69 years, male, NA, stage:3, dead, 20 days	3079.6
DO48681	57 years, male, NA, stage:2, alive, 900 days	3070.0
DO45239	42 years, male, NA, stage:2, alive, 870 days	3052.3
DO48719	80 years, male, NA, stage:2, alive, 690 days	3028.5
DO45219	78 years, male, NA, stage:2, alive, 1080 days	2989.8
DO23551	73 years, male, NA, stage:3, dead, 150 days	2987.6
DO23511	83 years, female, NA, stage:3, dead, 180 days	2979.0
DO50811	62 years, male, NA, stage:1, alive, 450 days	2970.6
DO23545	67 years, male, NA, stage:2, dead, 570 days	2960.6
DO50814	83 years, male, NA, stage:3, alive, 420 days	2956.1
DO45227	57 years, female, NA, stage:2, alive, 1020 days	2955.5
DO23543	63 years, male, NA, stage:2, alive, 1020 days	2948.4
DO23540	73 years, male, NA, stage:1, alive, 750 days	2925.6
DO45113	58 years, male, NA, stage:3, alive, 1560 days	2882.1
DO23510	80 years, female, NA, stage:2, alive, 870 days	2878.5
DO23531	78 years, female, NA, stage:3, alive, 900 days	2856.0
DO48695	77 years, male, NA, stage:2, alive, 720 days	2846.2
DO50839	47 years, female, NA, stage:3, alive, 330 days	2842.1
DO50859	77 years, male, NA, stage:2, alive, 180 days	2801.0
DO45093	71 years, male, NA, stage:2, dead, 720 days	2791.3
DO50800	74 years, male, NA, stage:2, alive, 510 days	2781.8
DO50817	75 years, male, NA, stage:2, alive, 390 days	2779.4
DO50793	76 years, male, NA, stage:4, alive, 540 days	2761.9
DO45223	67 years, male, NA, stage:4, alive, 1020 days	2757.1
DO50803	62 years, female, NA, stage:1, alive, 540 days	2744.1
DO50798	77 years, male, NA, stage:3, dead, 30 days	2739.5
DO45197	51 years, male, NA, stage:2, alive, 1170 days	2732.3
DO45117	73 years, female, NA, stage:2, dead, 1110 days	2722.1
DO48677	58 years, male, NA, stage:3, alive, 1140 days	2711.6
DO48700	78 years, female, NA, stage:2, alive, 810 days	2704.1
DO45261	74 years, male, NA, stage:3, alive, 990 days	2676.4
DO48693	71 years, male, NA, stage:2, alive, 900 days	2668.0
DO48759	73 years, male, NA, stage:3, alive, 720 days	2652.4
DO50806	70 years, male, NA, stage:4, alive, 540 days	2614.4
DO45225	69 years, male, NA, stage:1, alive, 1050 days	2611.8
DO45241	49 years, male, NA, stage:1, alive, 1080 days	2611.4
DO23524	71 years, female, NA, stage:2, alive, 1050 days	2601.7
DO45091	56 years, male, NA, stage:2, dead, 1320 days	2580.9
DO23535	67 years, male, NA, stage:1, alive, 960 days	2564.0
DO45153	77 years, female, NA, stage:2, alive, 1380 days	2548.2
DO45125	58 years, male, NA, stage:3, alive, 1680 days	2545.2
DO45235	68 years, female, NA, stage:1, alive, 900 days	2537.2
DO48720	62 years, female, NA, stage:2, alive, 570 days	2429.5
DO48716	71 years, male, NA, stage:2, alive, 720 days	2420.0
DO45177	81 years, female, NA, stage:3, alive, 1260 days	2412.4
DO45165	75 years, male, NA, stage:2, alive, 690 days	2405.5
DO45259	65 years, male, NA, stage:3, alive, 330 days	2404.5
DO23546	63 years, male, NA, stage:2, alive, 1050 days	2381.9
DO23539	77 years, male, NA, stage:1, alive, 1110 days	2337.9
DO50802	49 years, male, NA, stage:2, alive, 930 days	2328.1
DO48728	74 years, female, NA, stage:2, alive, 150 days	2319.1
DO23509	60 years, male, NA, stage:3, dead, 780 days	2298.8
DO45139	63 years, male, NA, stage:3, alive, 1320 days	2285.2
DO45129	61 years, male, NA, stage:3, alive, 1470 days	2264.7
DO45237	58 years, male, NA, stage:2, alive, 900 days	2231.4
DO45253	50 years, male, NA, stage:2, alive, 870 days	2211.8
DO45119	74 years, male, NA, stage:3, dead, 510 days	2189.4
DO45155	69 years, male, NA, stage:2, alive, 2160 days	2153.0
DO48679	72 years, male, NA, stage:2, alive, 1200 days	2153.0
DO23548	78 years, female, NA, stage:1, alive, 840 days	2138.5
DO45097	69 years, male, NA, stage:3, alive, 1620 days	2125.8
DO45203	71 years, female, NA, stage:2, alive, 1170 days	2125.6
DO45175	74 years, male, NA, stage:2, alive, 1140 days	2093.3
DO45103	47 years, male, NA, stage:3, alive, 450 days	2039.2
DO45157	62 years, male, NA, stage:2, alive, 1980 days	2036.3
DO48706	72 years, male, NA, stage:2, alive, 870 days	2024.2
DO48751	68 years, male, NA, stage:2, dead, 480 days	2003.6
DO45133	64 years, male, NA, stage:3, dead, 660 days	1987.1
DO45269	59 years, male, NA, stage:3, alive, 750 days	1947.5
DO23541	65 years, male, NA, stage:2, alive, 930 days	1932.7
DO45135	77 years, male, NA, stage:1, alive, 1410 days	1916.3
DO50808	68 years, male, NA, stage:2, alive, 570 days	1907.9
DO50840	49 years, male, NA, stage:2, alive, 330 days	1906.7
DO23521	63 years, male, NA, stage:3, alive, 1110 days	1854.5
DO45289	78 years, female, NA, stage:3, alive, 360 days	1853.1
DO50791	79 years, female, NA, stage:1, dead, 480 days	1832.5
DO50809	56 years, male, NA, stage:3, dead, 720 days	1779.1
DO45171	56 years, male, NA, stage:3, alive, 600 days	1708.7
DO45169	74 years, male, NA, stage:3, alive, 1350 days	1673.3
DO50785	37 years, male, NA, stage:4, dead, 90 days	1626.3
DO48730	73 years, female, NA, stage:2, alive, 630 days	1620.5
DO23529	72 years, male, NA, stage:4, alive, 930 days	1555.3
DO45281	83 years, male, NA, stage:4, alive, 750 days	1450.6
DO45217	69 years, female, NA, stage:3, dead, 270 days	1404.2
DO48682	72 years, female, NA, stage:3, dead, 120 days	1401.6
DO45163	76 years, male, NA, stage:2, alive, 960 days	1303.5
DO48672	81 years, male, NA, stage:2, alive, 450 days	1296.0
DO45131	53 years, male, NA, stage:4, dead, 360 days	1249.6
DO45275	65 years, male, NA, stage:3, dead, 10 days	1193.9
DO23508	79 years, female, NA, stage:2, alive, 390 days	1177.0
DO45221	75 years, female, NA, stage:4, dead, 390 days	1169.4
DO45161	74 years, male, NA, stage:2, dead, 540 days	1114.3
DO45209	70 years, male, NA, stage:4, alive, 1350 days	1067.1
DO45092	62 years, male, NA, stage:4, dead, 1200 days	1026.8
DO45279	67 years, male, NA, stage:3, alive, 1290 days	1005.7
DO23513	76 years, male, NA, stage:3, alive, 1200 days	983.4
DO23514	64 years, male, NA, stage:2, alive, 1290 days	974.2
DO50815	62 years, male, NA, stage:3, alive, 150 days	967.0
DO23530	53 years, male, NA, stage:4, dead, 180 days	902.6
DO50778	60 years, male, NA, stage:4, alive, 630 days	878.9
DO50822	66 years, male, NA, stage:2, alive, 510 days	878.6
DO48723	73 years, male, NA, stage:1, alive, 600 days	788.4
DO23542	66 years, male, NA, stage:3, alive, 960 days	774.5
DO45145	78 years, male, NA, stage:3, dead, 60 days	753.7
DO45251	57 years, female, NA, stage:2, alive, 900 days	697.6
DO45303	62 years, female, NA, stage:3, alive, 990 days	605.1
DO23549	74 years, male, NA, stage:3, alive, 990 days	560.5
DO45127	73 years, male, NA, stage:3, dead, 420 days	527.4
DO23547	74 years, male, NA, stage:1, alive, 1020 days	474.5
DO45249	57 years, male, NA, stage:1, alive, 630 days	397.7
DO45305	66 years, male, NA, stage:4, alive, 300 days	356.3
DO23519	65 years, male, NA, stage:3, alive, 630 days	329.2
DO45267	73 years, male, NA, stage:3, dead, 570 days	326.7
DO45277	64 years, male, NA, stage:3, alive, 600 days	298.0
DO45283	60 years, male, NA, stage:3, alive, 510 days	294.1
DO50829	78 years, male, NA, stage:3, alive, 570 days	164.3
DO45301	56 years, male, NA, stage:2, dead, 1440 days	139.4
DO45297	61 years, female, NA, stage:4, dead, 1260 days	90.6
DO48747	62 years, male, NA, stage:3, alive, 540 days	67.3
DO45287	74 years, male, NA, stage:1, alive, 390 days	65.7
DO45285	59 years, male, NA, stage:3, alive, 480 days	63.1
DO45307	54 years, female, NA, stage:4, dead, 240 days	12.7
DO45245	75 years, female, NA, stage:2, dead, 240 days	7.5
DO45299	70 years, female, NA, stage:1, alive, 1440 days	6.9
DO23523	52 years, male, NA, stage:3, alive, 1080 days	4.1
DO45211	76 years, male, NA, stage:3, alive, 240 days	0.8
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LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
877	Tumor	2.0
425	Tumor	1.6
343	Tumor	1.3
463	Tumor	1.2
671	Tumor	1.2
192	Normal	1.1
125	Tumor	1.1
635	Tumor	1.0
815	Tumor	1.0
863	Tumor	0.9
355	Tumor	0.8
527	Tumor	0.8
277	Tumor	0.8
131	Tumor	0.8
743	Tumor	0.6
813	Tumor	0.6
217	Tumor	0.6
647	Tumor	0.6
697	Tumor	0.6
445	Tumor	0.6
975	Tumor	0.5
375	Tumor	0.5
224	Normal	0.5
455	Tumor	0.5
185	Tumor	0.4
471	Tumor	0.4
715	Tumor	0.4
271	Tumor	0.4
742	Normal	0.4
1044	Normal	0.4
223	Tumor	0.4
883	Tumor	0.4
862	Normal	0.4
413	Tumor	0.4
186	Normal	0.4
745	Tumor	0.3
823	Tumor	0.3
227	Tumor	0.3
983	Tumor	0.3
777	Tumor	0.3
124	Normal	0.3
342	Normal	0.3
394	Normal	0.3
744	Normal	0.3
817	Tumor	0.3
921	Tumor	0.3
881	Tumor	0.3
958	Normal	0.3
523	Tumor	0.2
393	Tumor	0.2
218	Normal	0.2
443	Tumor	0.2
392	Normal	0.2
814	Normal	0.2
545	Tumor	0.2
354	Normal	0.2
137	Tumor	0.2
357	Tumor	0.2
391	Tumor	0.2
976	Normal	0.2
421	Tumor	0.2
517	Tumor	0.2
452	Normal	0.2
741	Tumor	0.1
297	Tumor	0.1
465	Tumor	0.1
366	Normal	0.1
536	Normal	0.1
516	Normal	0.1
135	Tumor	0.1
433	Tumor	0.1
221	Tumor	0.1
146	Normal	0.1
363	Tumor	0.1
444	Normal	0.1
268	Normal	0.1
474	Normal	0.1
716	Normal	0.1
435	Tumor	0.1
431	Tumor	0.1
685	Tumor	0.1
922	Normal	0.1
384	Normal	0.1
162	Normal	0.1
461	Tumor	0.1
298	Normal	0.1
981	Tumor	0.1
713	Tumor	0.0
423	Tumor	0.0
533	Tumor	0.0
386	Normal	0.0
365	Tumor	0.0
462	Normal	0.0
388	Normal	0.0
368	Normal	0.0
663	Tumor	0.0
187	Tumor	0.0
214	Normal	0.0
977	Tumor	0.0
284	Normal	0.0
422	Normal	0.0
938	Normal	0.0
574	Normal	0.0
466	Normal	0.0
126	Normal	0.0
352	Normal	0.0
672	Normal	0.0
344	Normal	0.0
111	Normal	0.0
636	Normal	0.0
524	Normal	0.0
138	Normal	-0.1
746	Normal	-0.1
426	Normal	-0.1
494	Normal	-0.1
385	Tumor	-0.1
383	Tumor	-0.1
738	Normal	-0.1
142	Normal	-0.1
414	Normal	-0.1
395	Tumor	-0.1
497	Tumor	-0.1
641	Tumor	-0.1
1026	Normal	-0.1
328	Normal	-0.1
332	Normal	-0.1
171	Tumor	-0.1
161	Tumor	-0.1
428	Normal	-0.1
222	Normal	-0.1
914	Normal	-0.1
434	Normal	-0.1
331	Tumor	-0.1
816	Normal	-0.1
213	Tumor	-0.1
852	Normal	-0.1
196	Normal	-0.1
963	Tumor	-0.1
818	Normal	-0.1
362	Normal	-0.1
228	Normal	-0.1
424	Normal	-0.1
695	Tumor	-0.1
1045	Tumor	-0.1
968	Normal	-0.1
1022	Normal	-0.1
191	Tumor	-0.1
447	Tumor	-0.1
172	Normal	-0.1
132	Normal	-0.1
515	Tumor	-0.2
698	Normal	-0.2
918	Normal	-0.2
778	Normal	-0.2
351	Tumor	-0.2
141	Tumor	-0.2
361	Tumor	-0.2
195	Tumor	-0.2
864	Normal	-0.2
1021	Tumor	-0.2
358	Normal	-0.2
262	Normal	-0.2
472	Normal	-0.2
618	Normal	-0.2
261	Tumor	-0.2
492	Normal	-0.2
148	Normal	-0.2
662	Normal	-0.2
482	Normal	-0.2
1028	Normal	-0.2
468	Normal	-0.2
723	Tumor	-0.2
535	Tumor	-0.2
498	Normal	-0.2
188	Normal	-0.2
285	Tumor	-0.2
538	Normal	-0.2
313	Tumor	-0.2
664	Normal	-0.2
283	Tumor	-0.2
448	Normal	-0.2
851	Tumor	-0.2
558	Normal	-0.2
396	Normal	-0.2
882	Normal	-0.2
484	Normal	-0.2
147	Tumor	-0.2
113	Tumor	-0.2
785	Tumor	-0.2
868	Normal	-0.2
884	Normal	-0.2
1015	Tumor	-0.2
573	Tumor	-0.2
727	Tumor	-0.2
456	Normal	-0.2
272	Normal	-0.3
286	Normal	-0.3
136	Normal	-0.3
518	Normal	-0.3
232	Normal	-0.3
114	Normal	-0.3
432	Normal	-0.3
642	Normal	-0.3
464	Normal	-0.3
212	Normal	-0.3
446	Normal	-0.3
312	Normal	-0.3
648	Normal	-0.3
436	Normal	-0.3
376	Normal	-0.3
982	Normal	-0.3
665	Tumor	-0.3
353	Tumor	-0.3
483	Tumor	-0.3
314	Normal	-0.3
477	Tumor	-0.3
951	Tumor	-0.3
917	Tumor	-0.3
954	Normal	-0.3
564	Normal	-0.3
367	Tumor	-0.3
488	Normal	-0.3
411	Tumor	-0.3
128	Normal	-0.3
966	Normal	-0.3
387	Tumor	-0.3
478	Normal	-0.3
145	Tumor	-0.3
956	Normal	-0.3
964	Normal	-0.3
572	Normal	-0.3
666	Normal	-0.3
526	Normal	-0.3
1046	Normal	-0.3
278	Normal	-0.3
412	Normal	-0.3
615	Tumor	-0.3
858	Normal	-0.4
364	Normal	-0.4
258	Normal	-0.4
616	Normal	-0.4
528	Normal	-0.4
728	Normal	-0.4
937	Tumor	-0.4
926	Normal	-0.4
341	Tumor	-0.4
1016	Normal	-0.4
866	Normal	-0.4
553	Tumor	-0.4
1025	Tumor	-0.4
112	Tumor	-0.4
878	Normal	-0.4
943	Tumor	-0.4
857	Tumor	-0.4
874	Normal	-0.4
628	Normal	-0.4
571	Tumor	-0.4
311	Tumor	-0.4
356	Normal	-0.4
554	Normal	-0.4
952	Normal	-0.4
1042	Normal	-0.4
967	Tumor	-0.4
923	Tumor	-0.4
978	Normal	-0.4
568	Normal	-0.4
534	Normal	-0.4
686	Normal	-0.5
916	Normal	-0.5
627	Tumor	-0.5
912	Normal	-0.5
514	Normal	-0.5
873	Tumor	-0.5
567	Tumor	-0.5
786	Normal	-0.5
563	Tumor	-0.5
546	Normal	-0.5
416	Normal	-0.5
557	Tumor	-0.5
696	Normal	-0.5
737	Tumor	-0.5
415	Tumor	-0.5
491	Tumor	-0.5
722	Normal	-0.5
1043	Tumor	-0.5
1032	Normal	-0.5
617	Tumor	-0.5
127	Tumor	-0.5
924	Normal	-0.5
487	Tumor	-0.5
756	Normal	-0.5
944	Normal	-0.6
1013	Tumor	-0.6
865	Tumor	-0.6
481	Tumor	-0.6
824	Normal	-0.6
984	Normal	-0.6
714	Normal	-0.6
467	Tumor	-0.6
1014	Normal	-0.6
913	Tumor	-0.6
327	Tumor	-0.6
427	Tumor	-0.6
513	Tumor	-0.6
955	Tumor	-0.6
123	Tumor	-0.7
267	Tumor	-0.7
661	Tumor	-0.7
493	Tumor	-0.7
861	Tumor	-0.7
1027	Tumor	-0.7
525	Tumor	-0.7
867	Tumor	-0.7
257	Tumor	-0.7
953	Tumor	-0.7
1031	Tumor	-0.8
721	Tumor	-0.8
755	Tumor	-0.8
231	Tumor	-0.8
1041	Tumor	-0.8
965	Tumor	-0.8
915	Tumor	-0.8
911	Tumor	-0.8
473	Tumor	-0.9
724	Normal	-0.9
451	Tumor	-0.9
925	Tumor	-1.0
211	Tumor	-1.1
957	Tumor	-1.1
537	Tumor	-1.3
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA060933	Antibody HPA068011	Antibody CAB016695	Antibody CAB016765
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Carcinoma, Hepatocellular, NOS
Cholangiocarcinoma