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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NAT9 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
43.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
41.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
41.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
37.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
36.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
36.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
35.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
35.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
31.7
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
31.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
30.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
30.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
30.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
30.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
29.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
29.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
29.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
29.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
28.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
28.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
28.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
28.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
28.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
27.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
26.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
26.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
26.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
26.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
26.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
26.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
26.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
25.9
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
25.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
25.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
25.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
24.9
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
24.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
24.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
23.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
23.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
23.7
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
23.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
23.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
22.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
22.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
22.7
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
22.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
22.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
22.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
21.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
21.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
21.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
21.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
21.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
21.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
21.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
21.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
21.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
21.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
20.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
20.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
20.5
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
20.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
20.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
20.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
20.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
20.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
19.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
19.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
19.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
19.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
19.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
19.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
19.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
18.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
18.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
18.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
18.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
18.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
18.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
18.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
18.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
18.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
18.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
18.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
18.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
18.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
18.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
17.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
17.9
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
17.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
17.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
17.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
17.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
17.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
17.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
17.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
17.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
16.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
16.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
16.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
16.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
16.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
16.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
16.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
16.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
16.4
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
16.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
16.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
16.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
16.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
16.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
16.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
15.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
15.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
15.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
15.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
15.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
15.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
15.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
15.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
15.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
15.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
15.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
15.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
15.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
15.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
15.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
15.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
15.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
14.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
14.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
14.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
14.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
14.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
14.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
14.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
14.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
14.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
14.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
14.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
14.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
14.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
14.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
14.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
14.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
14.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
14.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
14.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
13.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
13.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
13.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
13.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
13.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
13.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
13.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
13.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
13.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
13.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
13.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
13.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
13.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
13.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
13.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
13.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
13.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
12.9
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
12.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
12.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
12.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
12.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
12.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
12.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
12.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
12.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
12.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
12.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
12.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
12.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
12.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
12.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
12.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
12.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
12.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
12.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
12.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
11.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
11.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
11.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
11.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
11.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
11.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
11.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
11.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
11.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
11.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
11.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
11.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
11.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
11.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
11.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
11.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
11.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
11.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
11.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
11.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
10.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
10.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
10.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
10.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
10.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
10.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
10.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
10.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
10.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
10.5
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
10.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
10.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
10.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
10.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
10.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
10.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
10.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
10.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
10.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
10.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
10.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
10.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
10.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
10.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
10.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
10.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
10.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
9.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
9.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
9.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
9.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
9.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
9.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
9.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
9.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
9.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
9.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
9.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
9.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
9.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
9.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
9.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
9.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
9.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
9.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
9.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
9.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
9.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
9.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
9.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
9.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
9.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
9.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
9.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
9.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
9.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
8.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
8.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
8.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
8.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
8.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
8.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
8.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
8.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
8.5
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
8.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
8.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
8.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
8.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
8.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
8.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
8.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
8.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
8.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
8.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
8.2
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
8.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
8.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
8.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
8.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
8.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
8.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
8.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
7.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
7.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
7.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
7.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
7.8
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
7.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
7.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
7.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
7.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
7.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
7.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
7.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
7.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
7.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
7.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
7.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
7.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
7.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
7.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
7.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
6.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
6.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
6.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
6.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
6.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
6.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
6.9
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
6.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
6.8
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
6.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
6.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
6.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
6.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
6.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
6.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
6.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
6.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
6.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
6.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
6.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
6.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
6.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
6.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
6.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
6.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
6.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
6.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
6.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
6.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
5.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
5.9
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
5.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
5.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
5.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
5.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
5.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
5.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
5.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
5.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
5.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
5.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
4.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
4.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
4.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
4.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
4.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
4.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
4.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
4.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
3.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NAT9 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.7
Number of samples
231
Samples
Sample
Description
TPM
DO23526
0 years, male, NA, stage:3, alive, 1050 days
58.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
56.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
54.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
50.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
50.3
DO45209
0 years, male, NA, stage:4, alive, 1350 days
50.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
46.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
46.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
44.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
44.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
43.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
42.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
39.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
39.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
38.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
38.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
36.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
36.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
36.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
35.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
35.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
34.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
34.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
34.7
DO45127
0 years, male, NA, stage:3, dead, 420 days
34.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
33.8
DO48751
0 years, male, NA, stage:2, dead, 480 days
33.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
33.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
33.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
33.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
33.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
32.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
32.2
DO45277
0 years, male, NA, stage:3, alive, 600 days
30.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
30.5
DO50832
0 years, male, NA, stage:3, alive, 90 days
30.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
30.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
30.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
29.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
28.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
28.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
28.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
28.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
28.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
28.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
28.3
DO45125
0 years, male, NA, stage:3, alive, 1680 days
28.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
27.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
27.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
26.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
26.8
DO45299
0 years, female, NA, stage:1, alive, 1440 days
26.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
26.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
26.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
25.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
25.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
25.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
25.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
25.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
24.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
24.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
24.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
24.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
24.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
24.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
23.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
23.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
23.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
23.5
DO45092
0 years, male, NA, stage:4, dead, 1200 days
23.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
23.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
23.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
22.9
DO45175
0 years, male, NA, stage:2, alive, 1140 days
22.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
22.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
22.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
22.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
22.3
DO48721
0 years, female, NA, stage:1, alive, 900 days
22.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
22.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
21.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
21.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
21.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
21.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
21.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
21.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
21.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
21.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
21.1
DO50811
0 years, male, NA, stage:1, alive, 450 days
21.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
21.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
20.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
20.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
20.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
20.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
20.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
20.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
20.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
20.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
20.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
20.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
19.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
19.9
DO45279
0 years, male, NA, stage:3, alive, 1290 days
19.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
19.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
19.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
19.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
19.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
19.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
19.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
19.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
19.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
18.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
18.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
18.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
18.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
18.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
18.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
18.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
18.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
18.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
17.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
17.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
17.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
17.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
17.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
17.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
17.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
17.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
17.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
17.4
DO45211
0 years, male, NA, stage:3, alive, 240 days
17.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
17.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
17.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
16.8
DO45215
0 years, male, NA, stage:2, alive, 1170 days
16.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
16.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
16.7
DO48757
0 years, female, NA, stage:3, alive, 480 days
16.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
16.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
16.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
16.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
16.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
16.3
DO50822
0 years, male, NA, stage:2, alive, 510 days
16.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
16.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
15.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
15.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
15.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
15.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
15.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
15.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
15.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
15.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
15.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
15.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
15.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
14.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
14.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
14.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
14.8
DO23516
0 years, male, NA, stage:3, dead, 20 days
14.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
14.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
14.6
DO45183
0 years, female, NA, stage:2, dead, 570 days
14.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
14.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
14.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
14.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
13.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
13.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
13.8
DO48746
0 years, male, NA, stage:3, alive, 570 days
13.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
13.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
13.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
13.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
13.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
13.3
DO48719
0 years, male, NA, stage:2, alive, 690 days
13.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
13.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
13.2
DO23514
0 years, male, NA, stage:2, alive, 1290 days
13.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
13.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
13.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
12.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
12.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
12.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
12.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
12.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
12.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
11.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
11.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
11.8
DO50857
0 years, male, NA, stage:2, alive, 210 days
11.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
11.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
11.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
11.4
DO45207
0 years, male, NA, stage:1, alive, 1050 days
11.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
11.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
11.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
10.9
DO45167
0 years, male, NA, stage:2, dead, 1440 days
10.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
10.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
10.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
10.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
10.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
10.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
10.2
DO45096
0 years, male, NA, stage:2, dead, 1290 days
10.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
10.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
10.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
9.9
DO45177
0 years, female, NA, stage:3, alive, 1260 days
9.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
9.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
9.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
9.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
9.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
9.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
9.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
9.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
8.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
8.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
8.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
8.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
7.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
7.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
7.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
7.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
7.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
6.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
6.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
4.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
868
Normal
1.8
863
Tumor
0.9
865
Tumor
0.9
1046
Normal
0.8
1042
Normal
0.7
862
Normal
0.7
698
Normal
0.7
866
Normal
0.7
477
Tumor
0.7
864
Normal
0.6
917
Tumor
0.5
473
Tumor
0.5
1032
Normal
0.5
964
Normal
0.5
722
Normal
0.5
1022
Normal
0.5
912
Normal
0.5
448
Normal
0.4
874
Normal
0.4
914
Normal
0.4
1027
Tumor
0.4
873
Tumor
0.4
713
Tumor
0.3
867
Tumor
0.3
958
Normal
0.3
1026
Normal
0.2
642
Normal
0.2
882
Normal
0.2
884
Normal
0.2
685
Tumor
0.2
478
Normal
0.2
926
Normal
0.2
618
Normal
0.1
918
Normal
0.1
913
Tumor
0.1
471
Tumor
0.1
1028
Normal
0.1
976
Normal
0.1
641
Tumor
0.1
714
Normal
0.1
616
Normal
0.1
636
Normal
0.1
715
Tumor
0.1
628
Normal
0.1
462
Normal
0.1
696
Normal
0.1
1045
Tumor
0.1
627
Tumor
0.1
617
Tumor
0.1
695
Tumor
0.0
878
Normal
0.0
482
Normal
0.0
1044
Normal
0.0
911
Tumor
0.0
686
Normal
-0.1
716
Normal
-0.1
883
Tumor
-0.1
915
Tumor
-0.1
966
Normal
-0.1
967
Tumor
-0.1
461
Tumor
-0.1
922
Normal
-0.1
925
Tumor
-0.1
615
Tumor
-0.1
472
Normal
-0.2
1041
Tumor
-0.2
481
Tumor
-0.2
474
Normal
-0.2
923
Tumor
-0.2
963
Tumor
-0.2
965
Tumor
-0.3
968
Normal
-0.3
924
Normal
-0.3
916
Normal
-0.3
975
Tumor
-0.3
877
Tumor
-0.3
861
Tumor
-0.3
635
Tumor
-0.3
881
Tumor
-0.3
721
Tumor
-0.4
1021
Tumor
-0.4
1025
Tumor
-0.4
921
Tumor
-0.4
536
Normal
-0.4
447
Tumor
-0.4
957
Tumor
-0.6
535
Tumor
-0.6
697
Tumor
-0.6
1043
Tumor
-0.6
1031
Tumor
-0.7
351
Tumor
N/A
231
Tumor
N/A
352
Normal
N/A
111
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
357
Tumor
N/A
358
Normal
N/A
361
Tumor
N/A
362
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
487
Tumor
N/A
125
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
131
Tumor
N/A
494
Normal
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
135
Tumor
N/A
498
Normal
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
937
Tumor
N/A
817
Tumor
N/A
938
Normal
N/A
818
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
943
Tumor
N/A
823
Tumor
N/A
944
Normal
N/A
824
Normal
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
1016
Normal
N/A
278
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
951
Tumor
N/A
1013
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
955
Tumor
N/A
956
Normal
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
723
Tumor
N/A
724
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
977
Tumor
N/A
857
Tumor
N/A
978
Normal
N/A
737
Tumor
N/A
858
Normal
N/A
738
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
982
Normal
N/A
741
Tumor
N/A
983
Tumor
N/A
742
Normal
N/A
984
Normal
N/A
743
Tumor
N/A
744
Normal
N/A
745
Tumor
N/A
746
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
513
Tumor
N/A
755
Tumor
N/A
514
Normal
N/A
756
Normal
N/A
515
Tumor
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
527
Tumor
N/A
648
Normal
N/A
528
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
777
Tumor
N/A
415
Tumor
N/A
778
Normal
N/A
416
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
665
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
545
Tumor
N/A
666
Normal
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
553
Tumor
N/A
312
Normal
N/A
433
Tumor
N/A
554
Normal
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
444
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
328
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
452
Normal
N/A
573
Tumor
N/A
211
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
212
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
341
Tumor
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.