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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MLX is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
100.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
100.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
97.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
93.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
83.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
73.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
70.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
67.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
63.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
62.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
62.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
58.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
57.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
54.6
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
53.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
53.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
52.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
52.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
52.5
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
52.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
51.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
50.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
49.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
49.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
47.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
46.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
45.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
45.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
45.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
45.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
44.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
44.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
44.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
43.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
43.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
43.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
43.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
42.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
42.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
42.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
42.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
42.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
41.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
41.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
41.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
40.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
39.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
39.7
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
39.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
39.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
39.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
39.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
38.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
38.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
38.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
38.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
38.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
38.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
38.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
38.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
37.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
37.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
37.8
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
37.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
37.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
37.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
37.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
37.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
36.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
36.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
36.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
36.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
35.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
35.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
35.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
35.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
35.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
35.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
35.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
35.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
35.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
35.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
34.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
34.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
34.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
34.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
34.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
34.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
34.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
34.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
34.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
34.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
34.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
34.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
34.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
33.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
33.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
33.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
33.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
33.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
33.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
33.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
33.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
33.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
32.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
32.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
32.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
32.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
32.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
32.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
32.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
32.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
32.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
32.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
32.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
32.4
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
32.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
32.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
32.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
32.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
32.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
32.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
31.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
31.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
31.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
31.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
31.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
31.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
31.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
31.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
30.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
30.9
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
30.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
30.9
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
30.4
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
30.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
30.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
30.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
30.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
30.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
30.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
30.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
29.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
29.8
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
29.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
29.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
29.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
29.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
29.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
29.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
29.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
29.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
29.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
29.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
29.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
29.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
28.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
28.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
28.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
28.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
28.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
28.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
28.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
28.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
28.3
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
28.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
28.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
28.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
27.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
27.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
27.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
27.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
27.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
27.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
27.2
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
27.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
27.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
27.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
27.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
27.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
27.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
26.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
26.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
26.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
26.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
26.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
26.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
26.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
26.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
26.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
26.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
26.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
26.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
25.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
25.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
25.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
25.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
25.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
25.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
25.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
25.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
25.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
24.7
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
24.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
24.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
24.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
23.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
23.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
23.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
23.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
23.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
23.7
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
23.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
23.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
23.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
23.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
23.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
23.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
22.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
22.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
22.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
22.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
22.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
22.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
22.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
22.4
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
22.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
22.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
22.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
22.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
22.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
22.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
21.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
21.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
21.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
21.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
21.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
21.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
21.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
21.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
21.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
21.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
21.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
21.2
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
21.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
21.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
21.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
21.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
21.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
21.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
21.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
21.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
21.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
20.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
20.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
20.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
20.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
20.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
20.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
20.6
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
20.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
20.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
20.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
20.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
20.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
20.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
20.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
20.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
20.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
19.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
19.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
19.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
19.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
19.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
19.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
19.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
19.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
19.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
19.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
19.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
19.5
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
19.4
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
19.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
19.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
19.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
19.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
19.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
19.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
19.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
19.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
19.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
19.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
18.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
18.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
18.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
18.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
18.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
18.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
18.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
18.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
18.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
18.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
18.2
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
18.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
18.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
18.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
18.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
18.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
18.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
17.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
17.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
17.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
17.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
17.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
17.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
17.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
16.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
16.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
16.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
16.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
16.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
16.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
16.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
16.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
16.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
16.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
15.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
15.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
15.4
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
15.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
15.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
15.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
15.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
15.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
14.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
14.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
14.7
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
14.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
14.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
14.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
14.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
13.9
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
13.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
13.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
13.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
13.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
13.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
13.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
12.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
12.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
12.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
11.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
11.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
10.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
10.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
10.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
10.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
9.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
9.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
9.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
7.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MLX is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.0
Number of samples
231
Samples
Sample
Description
TPM
DO50809
0 years, male, NA, stage:3, dead, 720 days
84.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
77.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
66.9
DO45119
0 years, male, NA, stage:3, dead, 510 days
64.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
61.8
DO48741
0 years, male, NA, stage:3, alive, 240 days
60.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
60.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
59.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
58.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
55.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
55.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
53.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
52.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
52.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
51.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
51.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
51.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
51.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
50.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
49.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
49.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
48.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
48.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
48.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
47.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
47.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
46.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
46.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
45.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
45.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
45.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
45.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
44.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
44.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
43.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
43.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
43.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
43.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
43.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
42.1
DO48716
0 years, male, NA, stage:2, alive, 720 days
42.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
41.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
41.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
41.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
41.7
DO50791
0 years, female, NA, stage:1, dead, 480 days
41.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
41.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
41.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
40.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
40.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
40.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
40.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
40.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
40.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
39.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
39.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
39.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
39.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
39.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
38.9
DO45127
0 years, male, NA, stage:3, dead, 420 days
38.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
38.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
38.5
DO23549
0 years, male, NA, stage:3, alive, 990 days
38.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
38.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
37.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
37.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
36.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
36.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
36.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
36.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
36.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
36.2
DO45257
0 years, male, NA, stage:3, alive, 810 days
35.9
DO50816
0 years, male, NA, stage:2, alive, 390 days
35.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
35.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
35.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
35.7
DO48743
0 years, female, NA, stage:2, alive, 570 days
35.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
35.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
35.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
35.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
35.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
35.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
34.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
34.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
34.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
34.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
34.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
34.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
34.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
34.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
34.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
33.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
33.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
33.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
33.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
33.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
33.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
33.0
DO48679
0 years, male, NA, stage:2, alive, 1200 days
32.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
32.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
32.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
32.5
DO45185
0 years, male, NA, stage:2, alive, 600 days
32.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
32.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
32.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
32.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
31.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
31.8
DO227801
0 years, female, NA, stage:1, alive, 660 days
31.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
31.5
DO48737
0 years, male, NA, stage:1, alive, 720 days
31.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
31.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
30.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
30.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
30.7
DO48730
0 years, female, NA, stage:2, alive, 630 days
30.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
30.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
30.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
30.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
30.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
30.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
29.9
DO45177
0 years, female, NA, stage:3, alive, 1260 days
29.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
29.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
29.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
29.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
29.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
29.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
29.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
28.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
28.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
28.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
28.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
28.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
28.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
28.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
28.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
28.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
28.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
28.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
28.1
DO50811
0 years, male, NA, stage:1, alive, 450 days
28.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
28.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
27.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
27.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
27.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
27.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
27.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
27.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
27.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
27.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
26.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
26.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
26.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
26.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
26.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
26.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
26.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
26.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
26.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
26.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
26.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
26.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
25.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
25.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
25.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
25.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
25.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
25.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
25.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
25.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
25.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
25.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
24.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
24.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
24.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
24.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
24.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
24.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
23.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
23.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
23.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
23.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
23.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
23.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
23.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
23.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
23.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
23.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
23.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
23.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
23.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
23.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
22.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
22.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
22.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
22.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
21.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
21.8
DO45094
0 years, male, NA, stage:3, alive, 1650 days
21.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
21.5
DO45269
0 years, male, NA, stage:3, alive, 750 days
21.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
21.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
21.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
20.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
20.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
20.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
19.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
19.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
19.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
19.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
19.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
19.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
19.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
18.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
18.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
18.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
18.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
18.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
18.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
18.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
18.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
18.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
17.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
16.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
16.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
15.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
11.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
11.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
977
Tumor
1.6
915
Tumor
1.5
1041
Tumor
1.4
865
Tumor
1.3
957
Tumor
1.3
695
Tumor
1.3
861
Tumor
1.2
911
Tumor
1.1
1013
Tumor
1.1
741
Tumor
1.1
867
Tumor
1.0
435
Tumor
1.0
171
Tumor
1.0
445
Tumor
1.0
487
Tumor
0.9
481
Tumor
0.9
981
Tumor
0.8
755
Tumor
0.8
127
Tumor
0.8
727
Tumor
0.8
1027
Tumor
0.8
147
Tumor
0.8
473
Tumor
0.7
277
Tumor
0.7
477
Tumor
0.7
431
Tumor
0.7
411
Tumor
0.6
647
Tumor
0.6
965
Tumor
0.6
357
Tumor
0.6
937
Tumor
0.6
231
Tumor
0.6
123
Tumor
0.5
953
Tumor
0.5
141
Tumor
0.5
423
Tumor
0.5
353
Tumor
0.5
785
Tumor
0.5
451
Tumor
0.5
465
Tumor
0.4
483
Tumor
0.4
954
Normal
0.4
342
Normal
0.4
221
Tumor
0.4
533
Tumor
0.4
744
Normal
0.4
515
Tumor
0.4
1014
Normal
0.4
257
Tumor
0.4
161
Tumor
0.4
696
Normal
0.4
553
Tumor
0.4
737
Tumor
0.4
261
Tumor
0.4
922
Normal
0.4
425
Tumor
0.4
636
Normal
0.4
951
Tumor
0.4
128
Normal
0.4
648
Normal
0.4
778
Normal
0.3
635
Tumor
0.3
554
Normal
0.3
686
Normal
0.3
1015
Tumor
0.3
1025
Tumor
0.3
1022
Normal
0.3
267
Tumor
0.3
818
Normal
0.3
114
Normal
0.3
191
Tumor
0.3
484
Normal
0.3
124
Normal
0.3
975
Tumor
0.3
873
Tumor
0.3
665
Tumor
0.3
926
Normal
0.3
1028
Normal
0.3
1031
Tumor
0.3
557
Tumor
0.3
984
Normal
0.3
714
Normal
0.3
883
Tumor
0.3
493
Tumor
0.3
786
Normal
0.3
523
Tumor
0.3
112
Tumor
0.3
358
Normal
0.3
685
Tumor
0.3
666
Normal
0.3
878
Normal
0.3
298
Normal
0.3
354
Normal
0.3
443
Tumor
0.3
213
Tumor
0.2
1046
Normal
0.2
944
Normal
0.2
642
Normal
0.2
352
Normal
0.2
497
Tumor
0.2
955
Tumor
0.2
663
Tumor
0.2
1032
Normal
0.2
723
Tumor
0.2
857
Tumor
0.2
746
Normal
0.2
448
Normal
0.2
488
Normal
0.2
641
Tumor
0.2
344
Normal
0.2
912
Normal
0.2
824
Normal
0.2
227
Tumor
0.2
392
Normal
0.2
132
Normal
0.2
866
Normal
0.2
196
Normal
0.2
232
Normal
0.2
1021
Tumor
0.2
433
Tumor
0.2
185
Tumor
0.2
862
Normal
0.2
1026
Normal
0.2
982
Normal
0.2
777
Tumor
0.2
884
Normal
0.2
938
Normal
0.2
924
Normal
0.2
111
Normal
0.2
137
Tumor
0.1
662
Normal
0.1
138
Normal
0.1
361
Tumor
0.1
1045
Tumor
0.1
186
Normal
0.1
341
Tumor
0.1
355
Tumor
0.1
864
Normal
0.1
978
Normal
0.1
742
Normal
0.1
568
Normal
0.1
534
Normal
0.1
376
Normal
0.1
393
Tumor
0.1
672
Normal
0.1
615
Tumor
0.1
823
Tumor
0.1
364
Normal
0.1
698
Normal
0.1
187
Tumor
0.1
538
Normal
0.1
145
Tumor
0.1
618
Normal
0.1
363
Tumor
0.1
1016
Normal
0.1
146
Normal
0.1
921
Tumor
0.1
463
Tumor
0.1
628
Normal
0.1
721
Tumor
0.1
222
Normal
0.1
572
Normal
0.1
452
Normal
0.1
414
Normal
0.1
415
Tumor
0.1
952
Normal
0.1
573
Tumor
0.1
517
Tumor
0.1
868
Normal
0.1
172
Normal
0.1
148
Normal
0.1
126
Normal
0.1
526
Normal
0.1
918
Normal
0.1
546
Normal
0.1
1043
Tumor
0.0
882
Normal
0.0
756
Normal
0.0
258
Normal
0.0
356
Normal
0.0
967
Tumor
0.0
368
Normal
0.0
268
Normal
0.0
365
Tumor
0.0
136
Normal
0.0
858
Normal
0.0
412
Normal
0.0
351
Tumor
0.0
468
Normal
0.0
738
Normal
0.0
616
Normal
0.0
664
Normal
0.0
436
Normal
0.0
558
Normal
0.0
464
Normal
0.0
524
Normal
0.0
1042
Normal
0.0
518
Normal
0.0
142
Normal
0.0
446
Normal
0.0
627
Tumor
0.0
494
Normal
0.0
314
Normal
0.0
162
Normal
0.0
462
Normal
0.0
528
Normal
0.0
471
Tumor
0.0
816
Normal
0.0
491
Tumor
0.0
195
Tumor
0.0
286
Normal
0.0
456
Normal
0.0
527
Tumor
0.0
113
Tumor
0.0
328
Normal
0.0
472
Normal
0.0
422
Normal
0.0
728
Normal
0.0
135
Tumor
0.0
923
Tumor
0.0
125
Tumor
0.0
916
Normal
0.0
466
Normal
0.0
432
Normal
0.0
327
Tumor
0.0
474
Normal
0.0
366
Normal
0.0
851
Tumor
0.0
218
Normal
0.0
964
Normal
-0.1
1044
Normal
-0.1
271
Tumor
-0.1
413
Tumor
-0.1
525
Tumor
-0.1
963
Tumor
-0.1
482
Normal
-0.1
563
Tumor
-0.1
745
Tumor
-0.1
272
Normal
-0.1
968
Normal
-0.1
427
Tumor
-0.1
332
Normal
-0.1
966
Normal
-0.1
388
Normal
-0.1
428
Normal
-0.1
313
Tumor
-0.1
724
Normal
-0.1
516
Normal
-0.1
498
Normal
-0.1
914
Normal
-0.1
426
Normal
-0.1
617
Tumor
-0.1
228
Normal
-0.1
278
Normal
-0.1
956
Normal
-0.1
574
Normal
-0.1
722
Normal
-0.1
537
Tumor
-0.1
852
Normal
-0.1
395
Tumor
-0.1
713
Tumor
-0.1
262
Normal
-0.1
958
Normal
-0.1
716
Normal
-0.1
514
Normal
-0.1
384
Normal
-0.1
874
Normal
-0.2
396
Normal
-0.2
362
Normal
-0.2
424
Normal
-0.2
416
Normal
-0.2
983
Tumor
-0.2
214
Normal
-0.2
478
Normal
-0.2
817
Tumor
-0.2
564
Normal
-0.2
536
Normal
-0.2
447
Tumor
-0.2
284
Normal
-0.2
814
Normal
-0.2
434
Normal
-0.2
492
Normal
-0.2
217
Tumor
-0.2
297
Tumor
-0.2
881
Tumor
-0.2
743
Tumor
-0.2
913
Tumor
-0.2
444
Normal
-0.3
188
Normal
-0.3
421
Tumor
-0.3
312
Normal
-0.3
461
Tumor
-0.3
343
Tumor
-0.3
224
Normal
-0.3
943
Tumor
-0.3
455
Tumor
-0.3
212
Normal
-0.3
394
Normal
-0.3
386
Normal
-0.3
976
Normal
-0.3
545
Tumor
-0.3
192
Normal
-0.3
715
Tumor
-0.4
925
Tumor
-0.4
391
Tumor
-0.4
567
Tumor
-0.4
571
Tumor
-0.4
223
Tumor
-0.4
467
Tumor
-0.4
513
Tumor
-0.4
813
Tumor
-0.5
131
Tumor
-0.5
815
Tumor
-0.5
877
Tumor
-0.5
375
Tumor
-0.6
387
Tumor
-0.6
285
Tumor
-0.6
661
Tumor
-0.6
283
Tumor
-0.6
697
Tumor
-0.7
863
Tumor
-0.7
383
Tumor
-0.7
671
Tumor
-0.8
367
Tumor
-0.9
917
Tumor
-1.1
311
Tumor
-1.1
331
Tumor
-1.2
535
Tumor
-1.3
211
Tumor
-1.3
385
Tumor
-1.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
