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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CCL2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
382.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
240.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
210.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
131.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
101.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
71.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
56.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
53.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
45.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
36.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
34.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
28.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
28.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
24.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
21.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
21.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
20.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
20.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
19.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
19.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
19.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
18.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
18.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
18.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
17.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
17.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
15.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
15.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
12.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
11.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
11.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
10.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
9.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
9.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
9.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
9.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
9.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
9.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
9.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
9.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
8.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
8.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
8.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
7.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
7.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
7.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
6.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
6.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
6.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
6.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
5.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
4.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
4.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
3.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
3.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
2.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
1.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
1.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
1.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CCL2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
185.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
1801.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
1280.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
1231.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
1147.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
1107.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
1105.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
1088.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
1075.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
1009.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
995.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
982.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
967.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
962.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
953.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
918.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
900.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
869.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
847.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
788.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
786.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
781.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
758.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
751.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
706.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
701.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
692.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
686.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
651.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
633.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
628.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
608.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
598.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
583.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
583.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
548.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
541.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
539.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
538.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
523.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
518.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
510.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
487.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
477.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
470.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
461.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
458.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
454.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
453.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
446.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
442.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
426.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
423.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
418.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
418.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
413.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
405.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
398.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
393.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
391.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
381.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
379.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
377.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
376.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
375.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
375.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
373.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
368.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
367.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
366.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
357.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
355.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
354.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
346.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
344.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
339.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
337.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
337.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
334.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
334.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
331.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
326.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
320.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
320.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
317.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
313.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
310.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
307.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
299.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
298.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
295.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
294.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
283.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
283.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
283.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
276.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
274.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
274.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
264.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
264.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
253.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
252.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
252.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
251.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
251.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
248.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
248.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
248.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
246.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
243.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
243.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
240.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
239.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
235.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
232.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
231.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
228.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
226.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
226.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
222.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
220.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
220.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
219.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
219.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
217.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
217.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
215.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
214.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
213.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
209.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
208.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
208.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
206.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
205.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
204.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
203.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
203.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
201.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
199.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
198.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
195.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
193.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
193.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
192.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
188.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
188.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
186.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
184.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
184.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
182.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
182.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
182.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
181.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
181.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
180.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
180.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
177.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
176.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
176.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
171.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
171.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
170.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
170.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
170.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
169.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
169.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
169.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
166.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
166.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
166.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
165.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
163.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
162.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
161.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
158.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
158.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
156.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
156.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
156.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
156.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
155.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
155.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
154.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
153.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
153.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
152.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
151.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
151.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
150.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
150.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
150.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
149.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
148.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
147.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
147.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
147.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
145.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
145.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
145.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
145.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
143.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
143.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
142.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
141.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
141.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
141.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
141.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
140.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
140.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
138.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
138.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
138.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
137.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
136.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
136.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
135.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
133.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
132.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
132.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
131.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
131.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
130.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
129.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
129.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
128.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
128.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
128.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
128.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
128.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
128.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
126.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
125.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
124.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
123.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
123.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
122.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
122.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
122.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
122.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
122.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
121.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
121.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
121.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
121.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
120.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
119.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
119.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
119.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
118.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
118.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
118.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
118.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
118.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
117.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
117.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
117.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
116.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
116.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
115.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
115.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
114.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
114.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
114.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
114.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
113.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
112.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
112.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
112.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
111.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
110.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
110.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
109.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
108.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
107.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
106.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
106.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
106.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
106.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
105.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
105.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
105.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
105.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
105.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
105.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
105.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
105.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
104.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
104.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
102.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
101.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
101.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
100.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
100.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
100.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
99.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
99.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
99.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
99.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
98.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
98.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
98.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
96.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
96.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
95.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
95.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
95.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
94.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
94.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
93.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
90.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
90.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
90.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
90.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
89.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
89.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
89.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
89.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
88.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
87.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
86.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
86.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
86.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
86.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
86.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
85.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
85.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
85.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
85.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
83.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
81.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
81.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
80.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
79.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
78.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
78.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
78.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
77.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
76.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
75.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
75.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
75.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
75.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
74.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
74.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
73.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
73.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
73.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
72.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
71.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
71.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
71.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
71.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
70.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
70.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
70.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
69.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
69.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
69.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
69.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
69.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
68.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
68.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
68.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
68.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
67.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
66.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
66.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
66.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
65.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
65.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
65.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
64.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
64.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
64.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
63.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
63.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
63.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
62.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
62.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
62.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
61.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
60.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
60.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
60.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
59.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
58.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
58.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
57.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
57.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
57.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
57.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
56.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
56.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
54.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
54.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
53.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
52.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
52.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
51.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
51.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
51.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
50.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
50.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
50.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
50.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
49.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
49.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
48.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
48.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
48.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
48.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
48.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
47.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
47.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
47.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
47.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
46.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
46.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
46.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
46.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
44.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
44.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
44.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
43.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
42.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
42.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
42.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
42.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
41.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
41.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
41.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
40.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
40.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
39.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
39.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
38.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
38.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
38.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
38.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
37.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
37.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
36.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
36.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
36.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
36.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
35.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
35.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
34.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
34.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
33.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
32.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
32.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
31.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
30.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
30.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
30.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
29.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
29.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
29.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
29.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
28.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
28.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
28.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
28.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
27.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
27.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
27.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
26.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
26.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
25.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
25.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
25.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
24.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
24.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
23.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
23.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
23.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
22.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
22.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
22.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
21.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
21.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
21.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
21.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
21.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
19.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
19.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
18.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
18.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
18.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
18.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
17.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
16.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
16.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
16.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
16.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
15.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
14.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
13.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
13.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
13.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
12.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
11.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
11.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
11.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
10.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
10.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
9.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
8.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
7.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
7.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
6.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
6.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
5.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
5.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
5.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
2.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
2.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
1.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CCL2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
140.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
620.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
603.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
601.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
533.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
414.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
383.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
368.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
362.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
348.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
343.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
340.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
299.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
285.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
274.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
252.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
240.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
230.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
230.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
227.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
227.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
222.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
221.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
217.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
215.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
205.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
204.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
189.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
177.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
173.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
167.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
167.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
165.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
157.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
156.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
156.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
147.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
145.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
143.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
138.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
136.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
125.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
122.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
121.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
118.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
115.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
115.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
105.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
103.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
102.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
102.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
96.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
92.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
89.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
85.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
85.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
81.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
80.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
77.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
69.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
69.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
67.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
65.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
65.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
62.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
60.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
60.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
58.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
58.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
58.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
55.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
52.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
48.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
46.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
44.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
39.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
39.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
38.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
37.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
36.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
31.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
28.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
26.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
24.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
24.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
23.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
22.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
20.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
19.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
18.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
16.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
16.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
13.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
12.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
12.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
12.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
11.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
7.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
6.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
6.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CCL2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
90.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
812.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
790.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
786.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
777.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
611.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
438.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
430.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
380.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
359.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
339.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
326.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
310.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
287.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
258.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
248.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
235.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
229.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
225.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
218.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
213.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
207.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
204.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
201.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
201.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
192.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
190.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
190.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
189.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
187.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
185.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
185.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
184.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
184.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
183.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
181.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
176.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
169.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
167.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
166.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
165.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
165.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
163.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
159.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
158.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
156.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
155.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
153.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
152.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
148.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
147.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
146.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
146.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
139.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
139.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
136.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
134.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
127.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
126.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
126.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
124.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
124.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
124.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
124.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
124.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
123.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
122.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
121.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
120.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
119.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
118.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
117.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
115.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
115.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
113.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
111.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
109.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
108.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
107.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
105.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
104.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
103.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
102.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
100.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
99.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
99.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
98.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
97.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
97.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
97.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
97.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
96.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
96.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
96.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
96.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
95.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
93.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
92.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
88.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
88.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
84.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
84.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
81.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
81.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
79.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
78.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
78.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
78.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
76.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
76.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
75.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
72.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
71.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
71.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
71.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
70.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
70.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
63.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
63.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
62.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
62.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
61.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
61.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
61.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
61.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
61.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
60.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
59.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
57.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
57.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
57.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
56.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
56.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
55.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
55.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
55.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
54.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
52.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
51.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
51.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
51.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
50.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
50.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
49.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
49.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
49.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
49.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
49.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
49.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
49.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
48.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
48.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
48.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
48.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
47.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
47.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
47.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
47.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
47.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
46.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
45.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
44.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
44.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
44.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
44.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
44.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
44.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
43.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
43.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
42.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
42.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
42.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
42.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
41.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
40.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
40.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
39.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
38.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
37.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
36.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
36.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
36.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
36.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
35.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
35.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
34.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
34.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
34.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
34.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
33.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
33.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
32.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
31.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
31.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
31.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
31.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
30.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
28.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
28.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
28.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
28.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
28.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
28.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
28.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
27.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
27.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
27.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
27.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
26.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
26.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
26.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
25.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
25.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
25.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
25.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
25.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
25.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
24.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
24.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
24.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
23.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
22.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
22.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
22.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
21.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
21.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
21.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
21.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
20.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
19.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
19.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
18.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
18.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
16.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
16.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
16.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
16.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
15.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
15.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
15.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
14.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
14.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
14.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
13.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
13.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
13.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
13.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
12.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
11.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
11.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
11.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
11.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
11.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
11.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
10.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
10.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
10.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
9.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
9.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
9.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
9.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
8.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
8.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
7.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
7.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
6.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
6.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
6.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
6.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
5.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
5.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
5.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
5.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
5.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
3.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
3.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
2.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
