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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ICAM2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
214.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
66.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
60.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
44.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
39.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
38.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
36.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
35.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
35.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
34.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
34.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
34.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
33.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
33.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
31.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
30.5
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
29.5
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
29.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
28.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
28.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
28.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
27.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
26.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
26.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
26.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
25.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
25.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
24.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
24.2
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
24.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
23.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
23.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
22.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
22.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
22.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
22.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
22.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
22.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
21.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
21.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
21.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
21.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
21.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
20.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
20.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
20.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
20.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
20.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
20.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
20.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
20.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
19.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
19.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
19.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
19.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
19.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
19.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
19.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
19.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
19.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
18.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
18.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
18.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
18.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
18.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
18.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
18.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
17.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
17.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
17.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
17.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
17.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
17.7
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
17.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
17.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
17.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
16.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
16.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
16.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
16.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
16.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
16.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
16.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
16.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
16.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
16.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
16.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
16.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
16.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
16.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
16.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
16.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
16.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
15.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
15.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
15.7
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
15.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
15.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
15.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
15.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
15.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
15.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
15.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
15.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
15.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
15.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
15.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
14.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
14.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
14.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
14.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
14.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
14.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
14.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
14.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
14.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
14.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
14.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
13.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
13.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
13.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
13.8
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
13.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
13.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
13.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
13.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
13.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
13.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
13.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
13.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
13.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
13.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
12.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
12.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
12.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
12.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
12.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
12.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
12.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
12.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
12.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
12.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
12.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
12.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
12.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
12.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
12.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
12.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
12.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
12.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
12.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
12.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
12.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
12.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
12.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
12.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
11.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
11.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
11.9
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
11.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
11.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
11.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
11.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
11.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
11.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
11.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
11.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
11.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
11.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
11.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
11.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
11.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
11.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
11.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
11.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
11.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
11.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
10.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
10.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
10.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
10.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
10.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
10.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
10.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
10.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
10.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
10.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
10.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
10.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
9.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
9.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
9.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
9.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
9.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
9.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
9.5
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
9.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
9.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
9.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
9.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
9.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
9.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
9.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
9.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
9.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
9.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
9.1
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
9.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
9.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
9.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
9.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
9.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
9.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
9.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
9.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
9.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
8.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
8.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
8.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
8.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
8.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
8.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
8.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
8.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
8.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
8.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
8.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
8.5
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
8.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
8.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
8.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
8.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
8.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
8.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
8.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
7.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
7.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
7.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
7.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
7.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
7.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
7.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
7.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
7.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
7.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
7.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
7.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
7.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
7.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
7.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
7.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
7.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
7.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
7.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
7.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
7.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
7.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
7.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
7.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
7.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
7.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
7.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
7.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
7.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
7.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
7.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
6.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
6.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
6.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
6.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
6.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
6.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
6.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
6.6
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
6.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
6.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
6.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
6.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
6.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
6.5
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
6.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
6.5
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
6.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
6.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
6.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
6.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
6.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
6.4
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
6.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
6.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
6.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
6.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
6.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
6.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
6.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
6.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
6.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
6.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
5.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
5.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
5.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
5.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
5.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
5.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
5.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
5.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
5.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
5.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
5.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
5.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
5.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
5.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
5.4
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
5.4
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
5.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
5.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
5.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
5.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
5.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
5.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
4.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
4.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
4.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
4.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
4.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
4.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
4.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
4.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
4.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
4.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
4.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
4.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
4.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
4.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
4.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
4.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
4.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
4.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
4.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
3.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
3.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
3.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
3.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
3.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
3.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
3.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
3.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
3.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
2.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2.9
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
2.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
2.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
2.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
1.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ICAM2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.5
Number of samples
231
Samples
Sample
Description
TPM
DO50800
0 years, male, NA, stage:2, alive, 510 days
68.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
52.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
47.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
46.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
34.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
30.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
29.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
28.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
27.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
26.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
26.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
25.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
25.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
25.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
25.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
24.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
24.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
24.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
24.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
24.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
23.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
23.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
23.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
23.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
22.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
22.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
21.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
21.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
21.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
20.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
20.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
18.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
18.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
17.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
17.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
17.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
16.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
16.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
16.3
DO45183
0 years, female, NA, stage:2, dead, 570 days
16.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
15.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
15.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
15.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
14.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
14.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
14.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
14.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
14.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
14.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
14.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
14.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
13.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
13.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
13.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
13.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
13.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
13.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
13.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
13.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
12.9
DO45177
0 years, female, NA, stage:3, alive, 1260 days
12.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
12.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
12.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
12.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
12.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
12.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
12.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
12.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
11.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
11.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
11.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
11.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
11.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
11.3
DO45235
0 years, female, NA, stage:1, alive, 900 days
11.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
11.2
DO50787
0 years, male, NA, stage:3, alive, 480 days
11.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
11.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
11.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
11.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
10.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
10.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
10.6
DO45191
0 years, female, NA, stage:2, alive, 1200 days
10.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
10.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
10.3
DO50808
0 years, male, NA, stage:2, alive, 570 days
10.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
10.2
DO48717
0 years, male, NA, stage:4, dead, 180 days
10.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
10.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
10.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
9.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
9.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
9.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
9.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
9.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
9.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
9.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
9.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
9.2
DO23527
0 years, male, NA, stage:1, alive, 1050 days
9.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
9.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
9.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
9.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
8.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
8.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
8.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
8.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
8.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
8.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
8.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
8.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
8.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
8.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
8.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
7.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
7.9
DO50783
0 years, male, NA, stage:3, alive, 480 days
7.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
7.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
7.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
7.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
7.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
7.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
7.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
7.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
7.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
7.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
7.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
7.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
7.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
7.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
7.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
7.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
6.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
6.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
6.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
6.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
6.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
6.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
6.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
6.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
6.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
6.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
6.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
6.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
6.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
6.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
6.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
6.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
6.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
5.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
5.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
5.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
5.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
5.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
5.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
5.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
5.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
5.4
DO50804
0 years, male, NA, stage:2, alive, 720 days
5.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
5.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
5.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
5.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
5.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
5.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
5.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
5.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
4.9
DO45119
0 years, male, NA, stage:3, dead, 510 days
4.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
4.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
4.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
4.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
4.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
4.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
4.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
4.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
4.3
DO48674
0 years, male, NA, stage:2, alive, 1260 days
4.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
4.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
4.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
4.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
4.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
4.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
4.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
3.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
3.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
3.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
3.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
3.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
3.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
3.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
3.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
3.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
3.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
3.6
DO48695
0 years, male, NA, stage:2, alive, 720 days
3.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
3.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
3.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
3.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
3.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
3.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
3.3
DO50816
0 years, male, NA, stage:2, alive, 390 days
3.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
3.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
3.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
3.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
3.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
3.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
3.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
2.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
2.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
2.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
2.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
2.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
2.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
2.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
2.5
DO45269
0 years, male, NA, stage:3, alive, 750 days
2.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
2.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
2.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
2.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
2.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
2.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
2.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
1.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
1.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
1.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
1.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
1.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
1.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
1.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
261
Tumor
0.9
342
Normal
0.8
1042
Normal
0.8
661
Tumor
0.7
387
Tumor
0.7
1022
Normal
0.6
366
Normal
0.6
272
Normal
0.6
956
Normal
0.5
1028
Normal
0.5
926
Normal
0.5
884
Normal
0.5
914
Normal
0.5
186
Normal
0.5
436
Normal
0.5
218
Normal
0.5
344
Normal
0.5
368
Normal
0.5
362
Normal
0.5
396
Normal
0.5
922
Normal
0.5
358
Normal
0.4
138
Normal
0.4
434
Normal
0.4
192
Normal
0.4
952
Normal
0.4
1026
Normal
0.4
874
Normal
0.4
414
Normal
0.4
376
Normal
0.4
142
Normal
0.4
672
Normal
0.4
222
Normal
0.4
1032
Normal
0.4
314
Normal
0.4
627
Tumor
0.4
455
Tumor
0.4
866
Normal
0.4
132
Normal
0.4
162
Normal
0.4
426
Normal
0.4
148
Normal
0.4
124
Normal
0.3
666
Normal
0.3
214
Normal
0.3
446
Normal
0.3
386
Normal
0.3
172
Normal
0.3
862
Normal
0.3
628
Normal
0.3
1041
Tumor
0.3
917
Tumor
0.3
863
Tumor
0.3
648
Normal
0.3
196
Normal
0.3
698
Normal
0.3
868
Normal
0.3
392
Normal
0.3
662
Normal
0.3
918
Normal
0.3
664
Normal
0.3
528
Normal
0.3
422
Normal
0.3
818
Normal
0.3
114
Normal
0.3
864
Normal
0.3
665
Tumor
0.3
574
Normal
0.3
136
Normal
0.3
285
Tumor
0.2
616
Normal
0.2
722
Normal
0.2
816
Normal
0.2
352
Normal
0.2
568
Normal
0.2
858
Normal
0.2
332
Normal
0.2
217
Tumor
0.2
298
Normal
0.2
297
Tumor
0.2
1046
Normal
0.2
814
Normal
0.2
571
Tumor
0.2
188
Normal
0.2
211
Tumor
0.2
824
Normal
0.2
966
Normal
0.2
232
Normal
0.2
686
Normal
0.2
213
Tumor
0.2
312
Normal
0.2
642
Normal
0.2
615
Tumor
0.2
535
Tumor
0.2
111
Normal
0.2
554
Normal
0.2
964
Normal
0.2
1016
Normal
0.2
365
Tumor
0.2
671
Tumor
0.2
444
Normal
0.1
126
Normal
0.1
916
Normal
0.1
353
Tumor
0.1
538
Normal
0.1
428
Normal
0.1
262
Normal
0.1
388
Normal
0.1
433
Tumor
0.1
384
Normal
0.1
924
Normal
0.1
967
Tumor
0.1
912
Normal
0.1
331
Tumor
0.1
943
Tumor
0.1
258
Normal
0.1
367
Tumor
0.1
923
Tumor
0.1
466
Normal
0.1
742
Normal
0.1
354
Normal
0.1
968
Normal
0.1
647
Tumor
0.1
191
Tumor
0.1
938
Normal
0.1
452
Normal
0.1
128
Normal
0.1
146
Normal
0.1
723
Tumor
0.1
618
Normal
0.1
786
Normal
0.1
424
Normal
0.1
112
Tumor
0.0
195
Tumor
0.0
738
Normal
0.0
456
Normal
0.0
954
Normal
0.0
695
Tumor
0.0
393
Tumor
0.0
716
Normal
0.0
572
Normal
0.0
978
Normal
0.0
984
Normal
0.0
851
Tumor
0.0
187
Tumor
0.0
743
Tumor
0.0
958
Normal
0.0
882
Normal
0.0
713
Tumor
0.0
553
Tumor
0.0
728
Normal
0.0
857
Tumor
0.0
534
Normal
0.0
514
Normal
0.0
746
Normal
0.0
185
Tumor
0.0
361
Tumor
0.0
636
Normal
0.0
278
Normal
0.0
955
Tumor
0.0
464
Normal
0.0
394
Normal
0.0
546
Normal
0.0
432
Normal
0.0
421
Tumor
0.0
467
Tumor
0.0
1027
Tumor
0.0
852
Normal
0.0
127
Tumor
0.0
1045
Tumor
0.0
617
Tumor
0.0
537
Tumor
0.0
468
Normal
0.0
745
Tumor
0.0
696
Normal
-0.1
756
Normal
-0.1
744
Normal
-0.1
697
Tumor
-0.1
494
Normal
-0.1
498
Normal
-0.1
878
Normal
-0.1
944
Normal
-0.1
813
Tumor
-0.1
228
Normal
-0.1
161
Tumor
-0.1
137
Tumor
-0.1
536
Normal
-0.1
1014
Normal
-0.1
714
Normal
-0.1
741
Tumor
-0.1
873
Tumor
-0.1
224
Normal
-0.1
145
Tumor
-0.1
641
Tumor
-0.1
724
Normal
-0.1
982
Normal
-0.1
921
Tumor
-0.1
451
Tumor
-0.1
965
Tumor
-0.1
564
Normal
-0.1
558
Normal
-0.1
343
Tumor
-0.1
286
Normal
-0.1
915
Tumor
-0.1
526
Normal
-0.1
861
Tumor
-0.1
867
Tumor
-0.1
488
Normal
-0.1
913
Tumor
-0.1
113
Tumor
-0.2
284
Normal
-0.2
268
Normal
-0.2
1015
Tumor
-0.2
482
Normal
-0.2
721
Tumor
-0.2
463
Tumor
-0.2
545
Tumor
-0.2
383
Tumor
-0.2
416
Normal
-0.2
778
Normal
-0.2
563
Tumor
-0.2
785
Tumor
-0.2
817
Tumor
-0.2
976
Normal
-0.2
221
Tumor
-0.2
375
Tumor
-0.2
311
Tumor
-0.2
461
Tumor
-0.2
777
Tumor
-0.2
341
Tumor
-0.2
533
Tumor
-0.2
983
Tumor
-0.2
465
Tumor
-0.2
883
Tumor
-0.2
141
Tumor
-0.2
212
Normal
-0.2
355
Tumor
-0.2
447
Tumor
-0.2
391
Tumor
-0.3
823
Tumor
-0.3
171
Tumor
-0.3
557
Tumor
-0.3
462
Normal
-0.3
484
Normal
-0.3
277
Tumor
-0.3
881
Tumor
-0.3
423
Tumor
-0.3
472
Normal
-0.3
1013
Tumor
-0.3
925
Tumor
-0.3
685
Tumor
-0.3
977
Tumor
-0.3
431
Tumor
-0.3
363
Tumor
-0.3
227
Tumor
-0.3
364
Normal
-0.3
491
Tumor
-0.3
125
Tumor
-0.3
981
Tumor
-0.3
412
Normal
-0.3
415
Tumor
-0.3
356
Normal
-0.3
313
Tumor
-0.3
481
Tumor
-0.4
727
Tumor
-0.4
524
Normal
-0.4
328
Normal
-0.4
492
Normal
-0.4
957
Tumor
-0.4
478
Normal
-0.4
518
Normal
-0.4
573
Tumor
-0.4
877
Tumor
-0.4
1031
Tumor
-0.4
448
Normal
-0.4
445
Tumor
-0.4
715
Tumor
-0.5
123
Tumor
-0.5
471
Tumor
-0.5
435
Tumor
-0.5
327
Tumor
-0.5
663
Tumor
-0.5
1043
Tumor
-0.5
477
Tumor
-0.5
525
Tumor
-0.5
516
Normal
-0.5
493
Tumor
-0.5
975
Tumor
-0.5
147
Tumor
-0.5
474
Normal
-0.5
1025
Tumor
-0.5
413
Tumor
-0.5
815
Tumor
-0.6
357
Tumor
-0.6
385
Tumor
-0.6
1021
Tumor
-0.6
635
Tumor
-0.6
963
Tumor
-0.6
231
Tumor
-0.6
527
Tumor
-0.6
425
Tumor
-0.6
513
Tumor
-0.6
1044
Normal
-0.6
427
Tumor
-0.6
223
Tumor
-0.6
411
Tumor
-0.6
351
Tumor
-0.6
755
Tumor
-0.7
473
Tumor
-0.7
865
Tumor
-0.7
443
Tumor
-0.7
567
Tumor
-0.7
483
Tumor
-0.7
953
Tumor
-0.8
515
Tumor
-0.8
517
Tumor
-0.8
395
Tumor
-0.8
937
Tumor
-0.8
737
Tumor
-0.8
283
Tumor
-0.9
497
Tumor
-0.9
267
Tumor
-0.9
131
Tumor
-0.9
135
Tumor
-0.9
911
Tumor
-0.9
951
Tumor
-1.1
523
Tumor
-1.1
257
Tumor
-1.1
487
Tumor
-1.2
271
Tumor
-1.2
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.