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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMARCD2 is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
57.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
40.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
34.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
32.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
29.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
28.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
27.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
26.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
25.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
24.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
23.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
22.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
22.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
22.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
20.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
20.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
20.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
19.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
19.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
19.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
19.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
18.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
18.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
18.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
18.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
18.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
17.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
17.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
17.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
16.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
16.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
15.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
15.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
14.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
14.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
14.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
13.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
13.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
13.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
12.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
12.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
12.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
11.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
11.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
11.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
10.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
10.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
10.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
10.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
9.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
9.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
9.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
9.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
9.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
9.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
9.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
8.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
7.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
6.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
6.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
6.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
6.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
5.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMARCD2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
57.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
55.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
53.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
52.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
51.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
51.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
51.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
51.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
50.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
49.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
49.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
48.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
48.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
47.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
47.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
46.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
46.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
45.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
45.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
45.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
44.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
44.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
43.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
43.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
42.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
42.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
42.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
42.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
41.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
41.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
41.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
41.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
40.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
40.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
40.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
40.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
40.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
40.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
40.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
39.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
39.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
39.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
39.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
39.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
39.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
38.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
38.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
38.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
38.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
38.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
38.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
38.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
38.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
38.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
38.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
38.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
38.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
37.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
37.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
37.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
37.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
37.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
37.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
37.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
37.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
36.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
36.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
36.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
36.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
36.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
36.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
36.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
36.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
36.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
35.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
35.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
35.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
35.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
35.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
34.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
34.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
34.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
34.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
34.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
34.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
34.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
34.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
34.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
34.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
34.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
34.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
33.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
33.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
33.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
33.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
33.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
33.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
33.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
33.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
33.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
33.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
33.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
33.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
33.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
33.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
33.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
33.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
33.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
33.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
32.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
32.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
32.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
32.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
32.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
32.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
32.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
32.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
32.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
32.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
32.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
32.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
31.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
31.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
31.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
31.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
31.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
31.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
31.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
31.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
31.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
31.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
31.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
31.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
31.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
31.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
31.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
31.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
31.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
31.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
31.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
31.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
31.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
31.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
30.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
30.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
30.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
30.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
30.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
30.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
30.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
30.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
30.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
30.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
30.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
30.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
30.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
30.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
30.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
30.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
30.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
30.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
30.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
30.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
30.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
30.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
30.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
30.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
30.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
30.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
30.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
30.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
30.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
29.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
29.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
29.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
29.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
29.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
29.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
29.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
29.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
29.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
29.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
29.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
29.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
29.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
29.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
29.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
29.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
29.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
29.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
29.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
28.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
28.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
28.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
28.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
28.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
28.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
28.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
28.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
28.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
28.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
28.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
28.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
28.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
28.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
28.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
28.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
28.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
28.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
28.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
28.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
28.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
28.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
28.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
27.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
27.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
27.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
27.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
27.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
27.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
27.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
27.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
27.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
27.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
27.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
27.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
27.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
27.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
27.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
27.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
27.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
27.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
27.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
27.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
27.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
27.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
27.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
27.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
27.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
27.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
27.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
27.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
27.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
27.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
27.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
27.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
27.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
26.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
26.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
26.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
26.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
26.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
26.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
26.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
26.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
26.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
26.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
26.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
26.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
26.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
26.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
26.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
26.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
26.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
26.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
26.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
26.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
26.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
26.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
26.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
25.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
25.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
25.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
25.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
25.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
25.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
25.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
25.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
25.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
25.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
25.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
25.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
25.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
25.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
25.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
25.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
25.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
25.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
25.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
25.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
25.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
25.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
25.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
25.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
25.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
25.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
25.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
25.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
25.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
24.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
24.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
24.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
24.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
24.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
24.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
24.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
24.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
24.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
24.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
24.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
24.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
24.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
24.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
24.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
24.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
24.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
24.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
24.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
24.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
24.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
24.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
24.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
24.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
24.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
24.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
24.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
24.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
23.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
23.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
23.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
23.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
23.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
23.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
23.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
23.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
23.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
23.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
23.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
23.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
23.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
23.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
23.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
23.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
23.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
23.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
23.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
23.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
23.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
23.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
23.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
23.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
23.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
23.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
23.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
23.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
23.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
22.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
22.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
22.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
22.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
22.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
22.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
22.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
22.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
22.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
22.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
22.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
22.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
22.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
22.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
22.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
22.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
22.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
22.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
22.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
22.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
21.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
21.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
21.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
21.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
21.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
21.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
21.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
21.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
21.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
21.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
21.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
21.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
21.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
21.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
21.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
21.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
21.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
20.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
20.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
20.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
20.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
20.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
20.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
20.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
20.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
20.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
20.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
20.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
20.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
20.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
20.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
20.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
20.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
20.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
20.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
20.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
20.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
20.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
20.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
20.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
19.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
19.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
19.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
19.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
19.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
19.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
19.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
19.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
19.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
19.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
19.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
19.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
19.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
19.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
19.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
19.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
19.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
19.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
19.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
18.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
18.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
18.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
18.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
18.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
18.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
18.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
18.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
18.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
18.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
18.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
18.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
18.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
18.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
18.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
18.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
18.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
18.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
17.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
17.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
17.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
17.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
17.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
17.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
17.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
17.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
17.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
16.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
16.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
16.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
16.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
16.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
16.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
16.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
16.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
15.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
15.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
15.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
15.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
15.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
15.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
15.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
15.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
15.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
15.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
15.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
15.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
14.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
14.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
14.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
14.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
14.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
14.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
13.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
13.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
12.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
12.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
12.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
12.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
12.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
11.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
11.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
11.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
11.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
11.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
10.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
10.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
10.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
10.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
9.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
9.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
9.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
9.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
8.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
8.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
8.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
7.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
7.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMARCD2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
55.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
53.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
49.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
47.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
44.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
43.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
43.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
42.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
42.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
41.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
41.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
41.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
40.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
40.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
39.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
39.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
38.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
38.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
38.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
38.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
38.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
38.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
37.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
37.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
37.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
37.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
36.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
36.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
36.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
35.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
35.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
35.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
35.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
35.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
34.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
34.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
33.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
33.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
33.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
32.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
32.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
32.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
32.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
32.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
31.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
31.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
31.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
31.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
30.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
30.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
30.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
30.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
30.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
29.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
29.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
29.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
29.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
29.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
28.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
28.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
28.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
28.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
27.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
27.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
27.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
26.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
26.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
26.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
26.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
26.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
26.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
25.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
25.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
25.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
25.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
25.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
25.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
24.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
24.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
24.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
24.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
24.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
23.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
23.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
23.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
23.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
22.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
22.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
21.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
21.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
21.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
20.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
19.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
18.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
18.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
17.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
17.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMARCD2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
45.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
187.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
164.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
140.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
127.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
110.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
106.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
94.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
89.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
86.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
86.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
86.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
83.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
82.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
81.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
81.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
80.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
79.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
77.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
75.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
74.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
74.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
73.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
72.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
71.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
71.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
71.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
70.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
70.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
70.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
70.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
68.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
68.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
68.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
68.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
68.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
66.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
65.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
65.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
64.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
63.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
63.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
63.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
63.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
61.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
61.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
61.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
61.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
61.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
61.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
60.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
60.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
60.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
59.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
59.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
59.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
59.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
59.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
58.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
58.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
57.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
57.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
56.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
55.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
55.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
54.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
54.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
54.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
54.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
54.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
54.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
53.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
53.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
53.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
53.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
53.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
53.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
53.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
53.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
52.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
52.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
52.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
51.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
51.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
51.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
51.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
51.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
51.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
51.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
51.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
50.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
50.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
50.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
50.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
50.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
50.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
50.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
49.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
49.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
48.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
48.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
48.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
48.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
47.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
47.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
47.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
47.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
46.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
46.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
46.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
46.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
46.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
46.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
46.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
45.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
45.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
45.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
45.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
44.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
44.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
44.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
44.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
44.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
43.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
43.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
43.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
43.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
43.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
43.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
43.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
43.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
42.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
42.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
42.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
42.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
42.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
42.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
42.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
42.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
41.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
41.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
41.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
41.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
41.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
41.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
41.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
41.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
41.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
41.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
41.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
40.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
40.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
40.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
40.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
40.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
40.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
40.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
40.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
39.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
39.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
39.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
39.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
39.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
39.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
39.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
39.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
39.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
39.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
39.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
39.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
39.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
38.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
38.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
38.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
38.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
38.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
38.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
38.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
38.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
38.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
38.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
37.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
37.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
37.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
37.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
37.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
37.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
37.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
37.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
37.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
36.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
35.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
35.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
35.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
35.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
35.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
34.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
34.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
34.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
34.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
34.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
34.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
34.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
34.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
33.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
33.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
33.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
33.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
33.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
33.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
32.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
32.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
32.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
32.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
32.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
31.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
31.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
31.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
31.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
31.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
31.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
30.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
30.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
30.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
29.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
29.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
29.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
29.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
29.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
29.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
28.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
28.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
28.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
28.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
28.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
28.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
27.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
27.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
27.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
26.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
25.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
25.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
25.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
25.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
25.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
24.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
24.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
24.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
24.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
24.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
23.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
23.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
23.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
23.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
23.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
22.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
22.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
22.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
22.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
21.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
21.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
21.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
21.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
21.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
21.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
20.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
20.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
19.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
19.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
18.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
17.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
17.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
17.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
16.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
16.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
14.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
14.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
14.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
14.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
13.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
11.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
11.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
9.8
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
0.7
CPT0066470004
Tumor
0.5
CPT0012180003
Tumor
0.5
CPT0001340003
Tumor
0.4
CPT0092190003
Normal
0.4
CPT0079300001
Normal
0.4
CPT0077320001
Normal
0.4
CPT0017410003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0075560003
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0081600003
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0075720003
Tumor
0.3
CPT0012640003
Normal
0.3
CPT0084590001
Normal
0.2
CPT0006900003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0066480003
Tumor
0.2
CPT0001180009
Tumor
0.2
CPT0079510001
Normal
0.2
CPT0075170001
Normal
0.2
CPT0006630003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0069190001
Normal
0.2
CPT0001230001
Normal
0.2
CPT0024680001
Normal
0.2
CPT0069160003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0000660001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0014370004
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0009060003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0086820003
Tumor
0.1
CPT0079000001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0007860003
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0078940001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0015910003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0014350001
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0063630003
Tumor
0.1
CPT0012770003
Normal
0.1
CPT0014470001
Normal
0.1
CPT0017850003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0066520001
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0078670001
Normal
0.1
CPT0088640003
Normal
0.1
CPT0085670003
Tumor
0.1
CPT0025880003
Tumor
0.0
CPT0021240003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0025230003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0077490003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0086370003
Normal
0.0
CPT0088690003
Tumor
0.0
CPT0001540009
Tumor
0.0
CPT0025050003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0025290003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0012550003
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0011410003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0079270003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0015730003
Tumor
0.0
CPT0023350003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0007870001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0009080003
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0075570001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0089040001
Normal
-0.1
CPT0084560003
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0065750003
Tumor
-0.1
CPT0025060001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0079480003
Tumor
-0.1
CPT0066430001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0079180003
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0002350011
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0076330003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0025110003
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0088970003
Tumor
-0.1
CPT0086950003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0000640003
Tumor
-0.2
CPT0078530001
Normal
-0.2
CPT0065450001
Normal
-0.2
CPT0019130003
Tumor
-0.2
CPT0001500009
Tumor
-0.2
CPT0065930003
Tumor
-0.2
CPT0064370003
Tumor
-0.2
CPT0007320003
Tumor
-0.3
CPT0077310003
Tumor
-0.3
CPT0069000003
Tumor
-0.3
CPT0081880003
Tumor
-0.3
CPT0078660003
Tumor
-0.3
CPT0000790001
Normal
-0.3
CPT0002270011
Tumor
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
The Human Protein Atlas project is funded
