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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
C1QBP is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
76.9
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
387.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
318.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
231.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
198.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
193.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
189.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
186.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
177.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
176.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
174.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
172.2
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
168.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
164.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
164.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
156.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
155.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
154.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
148.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
146.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
140.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
137.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
136.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
136.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
136.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
135.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
135.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
134.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
133.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
131.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
129.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
128.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
128.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
128.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
125.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
124.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
124.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
123.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
122.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
121.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
121.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
121.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
121.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
120.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
120.5
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
120.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
119.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
119.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
117.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
116.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
116.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
115.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
115.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
113.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
112.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
112.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
111.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
111.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
110.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
110.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
109.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
109.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
108.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
107.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
107.6
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
106.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
105.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
105.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
104.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
101.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
101.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
101.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
100.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
100.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
100.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
100.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
99.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
99.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
99.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
99.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
99.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
98.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
98.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
98.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
97.8
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
97.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
96.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
96.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
96.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
96.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
95.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
95.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
95.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
95.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
94.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
93.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
93.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
92.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
92.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
92.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
92.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
91.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
91.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
90.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
90.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
90.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
89.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
88.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
88.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
87.3
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
86.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
86.7
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
86.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
86.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
86.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
85.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
85.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
84.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
84.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
83.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
83.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
83.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
82.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
82.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
82.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
82.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
82.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
82.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
82.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
81.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
81.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
81.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
81.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
80.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
80.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
80.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
80.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
80.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
79.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
79.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
79.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
79.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
78.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
78.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
78.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
78.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
77.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
77.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
77.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
77.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
77.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
77.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
77.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
76.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
76.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
76.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
76.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
76.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
76.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
76.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
75.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
75.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
75.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
75.3
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
75.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
74.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
74.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
74.4
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
74.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
74.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
73.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
73.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
72.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
72.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
72.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
72.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
71.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
71.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
71.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
70.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
69.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
69.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
69.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
69.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
68.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
68.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
68.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
68.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
68.7
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
67.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
67.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
67.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
67.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
67.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
66.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
66.9
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
66.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
66.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
66.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
66.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
66.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
65.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
65.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
65.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
65.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
65.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
65.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
64.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
64.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
64.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
64.5
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
64.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
64.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
63.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
63.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
63.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
62.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
62.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
62.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
61.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
61.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
61.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
61.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
60.9
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
60.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
60.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
60.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
60.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
59.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
59.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
58.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
57.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
57.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
57.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
57.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
56.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
55.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
55.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
55.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
55.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
55.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
54.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
54.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
54.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
54.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
54.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
54.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
53.6
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
53.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
53.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
53.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
53.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
52.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
52.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
52.4
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
52.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
51.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
51.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
50.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
50.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
50.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
50.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
49.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
49.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
49.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
49.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
49.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
48.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
48.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
48.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
48.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
48.1
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
48.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
47.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
47.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
47.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
47.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
47.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
47.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
46.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
46.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
46.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
46.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
46.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
46.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
45.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
45.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
45.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
45.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
45.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
45.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
44.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
44.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
44.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
44.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
43.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
43.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
43.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
43.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
43.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
43.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
43.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
42.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
42.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
42.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
42.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
41.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
41.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
41.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
41.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
41.2
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
41.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
40.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
40.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
40.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
40.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
40.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
39.7
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
39.7
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
39.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
39.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
38.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
38.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
37.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
37.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
36.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
36.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
36.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
36.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
35.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
34.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
34.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
34.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
34.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
33.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
33.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
33.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
33.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
33.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
33.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
32.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
32.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
31.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
31.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
30.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
30.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
29.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
28.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
28.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
28.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
28.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
25.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
25.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
25.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
24.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
24.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
23.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
21.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
18.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
15.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
14.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
14.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
C1QBP is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
59.0
Number of samples
231
Samples
Sample
Description
TPM
DO23508
0 years, female, NA, stage:2, alive, 390 days
267.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
231.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
187.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
174.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
172.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
156.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
142.4
DO45303
0 years, female, NA, stage:3, alive, 990 days
142.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
126.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
115.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
114.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
109.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
108.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
108.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
107.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
101.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
99.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
97.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
96.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
95.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
95.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
95.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
94.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
94.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
94.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
91.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
91.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
90.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
88.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
87.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
87.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
87.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
87.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
87.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
86.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
85.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
84.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
84.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
84.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
84.1
DO48747
0 years, male, NA, stage:3, alive, 540 days
83.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
81.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
81.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
80.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
79.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
77.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
77.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
77.0
DO48759
0 years, male, NA, stage:3, alive, 720 days
76.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
76.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
75.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
75.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
75.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
75.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
74.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
74.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
73.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
72.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
72.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
72.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
72.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
71.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
71.4
DO50804
0 years, male, NA, stage:2, alive, 720 days
71.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
70.6
DO48719
0 years, male, NA, stage:2, alive, 690 days
69.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
69.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
69.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
68.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
68.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
67.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
67.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
67.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
67.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
67.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
66.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
66.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
65.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
65.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
64.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
64.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
64.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
64.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
64.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
63.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
62.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
61.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
61.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
61.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
61.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
60.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
59.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
57.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
57.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
57.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
57.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
56.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
56.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
55.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
55.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
55.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
55.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
54.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
54.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
54.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
53.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
52.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
52.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
52.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
52.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
52.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
51.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
51.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
51.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
50.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
50.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
50.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
50.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
50.4
DO45281
0 years, male, NA, stage:4, alive, 750 days
49.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
49.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
49.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
49.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
49.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
48.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
48.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
48.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
47.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
47.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
46.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
46.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
46.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
46.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
46.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
46.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
46.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
46.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
45.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
45.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
45.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
45.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
44.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
44.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
43.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
43.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
43.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
42.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
42.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
42.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
41.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
41.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
41.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
41.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
41.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
40.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
40.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
40.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
40.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
40.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
40.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
39.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
39.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
39.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
39.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
39.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
39.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
38.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
38.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
38.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
38.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
37.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
37.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
37.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
36.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
36.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
36.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
36.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
36.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
36.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
35.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
35.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
35.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
35.0
DO50850
0 years, male, NA, stage:3, alive, 720 days
34.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
34.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
34.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
33.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
33.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
33.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
32.7
DO48743
0 years, female, NA, stage:2, alive, 570 days
32.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
32.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
32.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
31.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
31.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
30.7
DO50855
0 years, male, NA, stage:2, alive, 570 days
30.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
30.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
30.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
30.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
30.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
29.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
29.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
29.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
29.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
28.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
28.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
28.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
27.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
27.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
27.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
27.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
26.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
26.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
26.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
25.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
24.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
24.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
23.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
22.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
22.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
22.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
21.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
21.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
21.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
19.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
17.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
17.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
17.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
17.1
DO23532
0 years, female, NA, stage:1, alive, 960 days
8.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
227
Tumor
1.5
537
Tumor
1.0
925
Tumor
1.0
113
Tumor
1.0
915
Tumor
0.9
1043
Tumor
0.9
557
Tumor
0.8
1031
Tumor
0.8
865
Tumor
0.8
145
Tumor
0.8
363
Tumor
0.8
873
Tumor
0.8
713
Tumor
0.7
285
Tumor
0.7
937
Tumor
0.7
525
Tumor
0.7
665
Tumor
0.7
815
Tumor
0.6
715
Tumor
0.6
191
Tumor
0.6
553
Tumor
0.6
413
Tumor
0.6
367
Tumor
0.5
964
Normal
0.5
721
Tumor
0.5
922
Normal
0.5
517
Tumor
0.5
452
Normal
0.5
723
Tumor
0.5
1032
Normal
0.5
755
Tumor
0.5
425
Tumor
0.4
944
Normal
0.4
483
Tumor
0.4
221
Tumor
0.4
742
Normal
0.4
976
Normal
0.4
484
Normal
0.4
128
Normal
0.4
738
Normal
0.4
131
Tumor
0.4
186
Normal
0.4
967
Tumor
0.4
851
Tumor
0.4
534
Normal
0.4
938
Normal
0.4
546
Normal
0.4
488
Normal
0.4
261
Tumor
0.4
1041
Tumor
0.4
356
Normal
0.4
958
Normal
0.4
912
Normal
0.4
756
Normal
0.4
926
Normal
0.4
686
Normal
0.4
864
Normal
0.3
1022
Normal
0.3
394
Normal
0.3
957
Tumor
0.3
528
Normal
0.3
514
Normal
0.3
716
Normal
0.3
172
Normal
0.3
112
Tumor
0.3
698
Normal
0.3
388
Normal
0.3
573
Tumor
0.3
746
Normal
0.3
955
Tumor
0.3
376
Normal
0.3
451
Tumor
0.3
466
Normal
0.3
535
Tumor
0.3
858
Normal
0.3
641
Tumor
0.3
636
Normal
0.3
132
Normal
0.3
162
Normal
0.3
571
Tumor
0.3
786
Normal
0.3
448
Normal
0.3
436
Normal
0.3
232
Normal
0.3
975
Tumor
0.3
963
Tumor
0.3
924
Normal
0.3
214
Normal
0.2
862
Normal
0.2
954
Normal
0.2
1046
Normal
0.2
342
Normal
0.2
966
Normal
0.2
473
Tumor
0.2
135
Tumor
0.2
572
Normal
0.2
332
Normal
0.2
722
Normal
0.2
968
Normal
0.2
358
Normal
0.2
526
Normal
0.2
222
Normal
0.2
278
Normal
0.2
918
Normal
0.2
627
Tumor
0.2
714
Normal
0.2
564
Normal
0.2
868
Normal
0.2
696
Normal
0.2
745
Tumor
0.2
472
Normal
0.2
228
Normal
0.2
196
Normal
0.2
616
Normal
0.2
744
Normal
0.2
392
Normal
0.2
877
Tumor
0.2
951
Tumor
0.2
124
Normal
0.2
314
Normal
0.2
952
Normal
0.2
494
Normal
0.2
298
Normal
0.2
1014
Normal
0.2
554
Normal
0.2
412
Normal
0.2
558
Normal
0.2
366
Normal
0.2
728
Normal
0.2
477
Tumor
0.2
258
Normal
0.2
114
Normal
0.2
223
Tumor
0.2
818
Normal
0.2
414
Normal
0.2
1044
Normal
0.2
328
Normal
0.2
364
Normal
0.2
697
Tumor
0.2
538
Normal
0.2
982
Normal
0.2
474
Normal
0.2
882
Normal
0.2
978
Normal
0.2
618
Normal
0.1
387
Tumor
0.1
138
Normal
0.1
1016
Normal
0.1
1026
Normal
0.1
743
Tumor
0.1
368
Normal
0.1
447
Tumor
0.1
426
Normal
0.1
391
Tumor
0.1
536
Normal
0.1
916
Normal
0.1
884
Normal
0.1
778
Normal
0.1
482
Normal
0.1
981
Tumor
0.1
984
Normal
0.1
816
Normal
0.1
513
Tumor
0.1
648
Normal
0.1
142
Normal
0.1
524
Normal
0.1
1027
Tumor
0.1
516
Normal
0.1
852
Normal
0.1
567
Tumor
0.1
218
Normal
0.1
217
Tumor
0.1
396
Normal
0.1
468
Normal
0.1
344
Normal
0.1
883
Tumor
0.1
563
Tumor
0.1
362
Normal
0.1
286
Normal
0.1
462
Normal
0.1
111
Normal
0.1
478
Normal
0.1
464
Normal
0.1
956
Normal
0.1
146
Normal
0.1
267
Tumor
0.1
284
Normal
0.1
136
Normal
0.1
354
Normal
0.1
914
Normal
0.0
824
Normal
0.0
422
Normal
0.0
866
Normal
0.0
148
Normal
0.0
727
Tumor
0.0
384
Normal
0.0
1028
Normal
0.0
262
Normal
0.0
518
Normal
0.0
352
Normal
0.0
416
Normal
0.0
428
Normal
0.0
224
Normal
0.0
664
Normal
0.0
878
Normal
0.0
492
Normal
0.0
123
Tumor
0.0
331
Tumor
0.0
965
Tumor
0.0
231
Tumor
0.0
126
Normal
0.0
1042
Normal
0.0
185
Tumor
0.0
386
Normal
0.0
695
Tumor
0.0
1025
Tumor
0.0
446
Normal
0.0
574
Normal
0.0
741
Tumor
0.0
212
Normal
0.0
424
Normal
0.0
272
Normal
-0.1
1021
Tumor
-0.1
628
Normal
-0.1
312
Normal
-0.1
411
Tumor
-0.1
188
Normal
-0.1
1015
Tumor
-0.1
983
Tumor
-0.1
467
Tumor
-0.1
911
Tumor
-0.1
187
Tumor
-0.1
672
Normal
-0.1
456
Normal
-0.1
443
Tumor
-0.1
427
Tumor
-0.1
421
Tumor
-0.1
127
Tumor
-0.1
268
Normal
-0.1
813
Tumor
-0.1
481
Tumor
-0.1
432
Normal
-0.2
666
Normal
-0.2
823
Tumor
-0.2
465
Tumor
-0.2
642
Normal
-0.2
874
Normal
-0.2
487
Tumor
-0.2
361
Tumor
-0.2
921
Tumor
-0.2
498
Normal
-0.2
385
Tumor
-0.2
431
Tumor
-0.2
662
Normal
-0.2
545
Tumor
-0.2
685
Tumor
-0.2
671
Tumor
-0.2
434
Normal
-0.2
444
Normal
-0.2
351
Tumor
-0.2
415
Tumor
-0.2
814
Normal
-0.3
923
Tumor
-0.3
471
Tumor
-0.3
213
Tumor
-0.3
515
Tumor
-0.3
192
Normal
-0.3
383
Tumor
-0.3
393
Tumor
-0.3
297
Tumor
-0.3
435
Tumor
-0.3
881
Tumor
-0.3
1045
Tumor
-0.3
491
Tumor
-0.3
615
Tumor
-0.3
857
Tumor
-0.4
365
Tumor
-0.4
211
Tumor
-0.4
737
Tumor
-0.4
661
Tumor
-0.4
283
Tumor
-0.4
195
Tumor
-0.4
943
Tumor
-0.4
1013
Tumor
-0.4
493
Tumor
-0.4
635
Tumor
-0.4
313
Tumor
-0.4
137
Tumor
-0.4
171
Tumor
-0.5
977
Tumor
-0.5
327
Tumor
-0.5
785
Tumor
-0.5
817
Tumor
-0.5
568
Normal
-0.5
724
Normal
-0.5
271
Tumor
-0.5
497
Tumor
-0.5
257
Tumor
-0.5
395
Tumor
-0.5
527
Tumor
-0.5
913
Tumor
-0.5
125
Tumor
-0.5
341
Tumor
-0.5
147
Tumor
-0.6
533
Tumor
-0.6
777
Tumor
-0.6
433
Tumor
-0.6
161
Tumor
-0.6
953
Tumor
-0.6
355
Tumor
-0.6
423
Tumor
-0.6
461
Tumor
-0.6
463
Tumor
-0.7
523
Tumor
-0.7
141
Tumor
-0.7
277
Tumor
-0.7
861
Tumor
-0.7
917
Tumor
-0.7
647
Tumor
-0.7
353
Tumor
-0.8
455
Tumor
-0.8
863
Tumor
-0.8
311
Tumor
-0.8
617
Tumor
-0.8
663
Tumor
-0.8
375
Tumor
-0.9
343
Tumor
-0.9
867
Tumor
-0.9
357
Tumor
-1.0
445
Tumor
-1.2
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
