HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:5.7 nTPM
HPA Brain:51.4 nTPM
GTEx:5.7 nTPM
FANTOM5:4.3 Scaled Tags Per Million
Pig:39.2 nTPM
Mouse:14.5 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 51.4
Sample id Sample description nTPM
Hippocampus
nTPM: 50.3
2148 Female, age 91, left hemisphere 52.0
1911 Female, age 85, right hemisphere 51.5
2621 Female, age 67, right hemisphere 51.0
1855 Male, age 76, left hemisphere 50.4
1898 Male, age 80, left hemisphere 50.2
2529 Female, age 94, left hemisphere 46.9
Dentate gyrus
nTPM: 49.2
2531 Female, age 67, both hemispheres 54.6
1927 Female, age 91, both hemispheres 53.0
2246 Female, age 85, both hemispheres 50.4
2010 Male, age 76, both hemispheres 49.8
2528 Male, age 74, both hemispheres 47.7
2530 Female, age 94, left hemisphere 39.8
Entorhinal gyrus
nTPM: 45.2
2117 Female, age 91, right hemisphere 50.5
1938 Female, age 85, left hemisphere 47.1
2686 Male, age 75, right hemisphere 45.6
2613 Female, age 94, left hemisphere 45.0
2764 Male, age 80, right hemisphere 41.7
1787 Male, age 76, left hemisphere 41.5
Hippocampus, CA1
nTPM: 50.6
2749 Male, age 80, left hemisphere 55.3
1873 Female, age 85, both hemispheres 52.9
2045 Male, age 76, both hemispheres 49.2
2082 Female, age 91, right hemisphere 48.4
2527 Male, age 74, both hemispheres 47.0
Hippocampus, CA2
nTPM: 46.7
1963 Male, age 80, left hemisphere 54.5
2113 Female, age 91, right hemisphere 47.9
1892 Male, age 76, both hemispheres 46.4
1940 Female, age 85, left hemisphere 45.4
2249 Male, age 74, both hemispheres 44.5
2437 Female, age 94, left hemisphere 41.8
Hippocampus, CA3
nTPM: 51.4
2137 Male, age 80, left hemisphere 56.0
2620 Female, age 94, left hemisphere 53.7
1891 Female, age 85, both hemispheres 52.2
2861 Female, age 67, both hemispheres 48.9
2436 Male, age 74, both hemispheres 48.8
1867 Male, age 76, both hemispheres 48.6
Parahippocampal cortex
nTPM: 46.0
2622 Female, age 67, right hemisphere 50.1
1850 Male, age 80, both hemispheres 47.9
2693 Female, age 94, both hemispheres 47.9
2532 Female, age 72, left hemisphere 47.1
1990 Female, age 91, right hemisphere 46.3
1933 Female, age 85, both hemispheres 45.4
2245 Female, age 91, both hemispheres 44.9
2692 Male, age 74, both hemispheres 44.9
2250 Female, age 67, right hemisphere 44.6
2018 Male, age 76, both hemispheres 41.2
Perirhinal gyrus
nTPM: 45.3
1841 Female, age 85, right hemisphere 47.4
2521 Female, age 94, right hemisphere 47.4
1794 Male, age 80, right hemisphere 46.0
1847 Female, age 91, left hemisphere 44.7
2848 Male, age 76, right hemisphere 40.9
Subiculum
nTPM: 50.1
2438 Female, age 94, left hemisphere 56.3
1901 Male, age 80, both hemispheres 51.9
2729 Female, age 91, right hemisphere 51.9
1977 Female, age 85, both hemispheres 47.5
2619 Male, age 74, both hemispheres 47.3
2042 Male, age 76, both hemispheres 45.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 5.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.7
Samples: 197

Max nTPM: 11.0
Min nTPM: 3.2
Std nTPM: 1.3
Median nTPM: 5.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 11.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 10.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 10.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 9.5
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 8.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 8.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 8.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 8.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 8.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 8.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 8.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 4.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 4.3
FF:10169-103B7 60 years, female 6.2
FF:10153-102I9 76 years, female 2.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 39.2
Pig sample Sample description nTPM
Subiculum
nTPM: 38.8
Samples: 4

Max nTPM: 43.9
Min nTPM: 36.8
Sample A Female 43.9
Sample B Female 37.5
Sample C Male 36.8
Sample D Male 37.0
Dorsal hippocampus
nTPM: 39.2
Samples: 4

Max nTPM: 41.7
Min nTPM: 37.9
Sample A Female 39.0
Sample B Female 37.9
Sample C Male 41.7
Sample D Male 38.3
Entorhinal cortex
nTPM: 36.1
Samples: 4

Max nTPM: 38.4
Min nTPM: 32.9
Sample A Female 38.4
Sample B Female 34.9
Sample C Male 38.1
Sample D Male 32.9
Ventral hippocampus
nTPM: 36.1
Samples: 4

Max nTPM: 37.9
Min nTPM: 33.7
Sample A Female 37.9
Sample B Female 35.2
Sample C Male 33.7
Sample D Male 37.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 14.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.5
Samples: 4

Max nTPM: 16.5
Min nTPM: 13.1
Sample A Male 15.2
Sample B Male 13.2
Sample C Female 13.1
Sample D Female 16.5
Hippocampal formation
nTPM: 14.2
Samples: 4

Max nTPM: 17.5
Min nTPM: 10.8
Sample A Male 10.8
Sample B Male 16.6
Sample C Female 17.5
Sample D Female 11.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
70611060 Antisense, RP_050630_01_H02, Mouse strain C57BL/6J (56 days, male) 2.0
70611054 Antisense, RP_050630_01_H01, Mouse strain C57BL/6J (56 days, male) 1.9

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