HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:28.6 nTPM
HPA Brain:48.2 nTPM
GTEx:28.6 nTPM
FANTOM5:37.1 Scaled Tags Per Million
Pig:69.0 nTPM
Mouse:68.9 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054472Antibody CAB017456
Glial cells MediumNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 48.2
Sample id Sample description nTPM
Hippocampus
nTPM: 43.7
2621 Female, age 67, right hemisphere 47.0
2148 Female, age 91, left hemisphere 44.4
1911 Female, age 85, right hemisphere 44.1
1855 Male, age 76, left hemisphere 42.8
1898 Male, age 80, left hemisphere 42.4
2529 Female, age 94, left hemisphere 41.4
Dentate gyrus
nTPM: 45.2
2531 Female, age 67, both hemispheres 49.4
1927 Female, age 91, both hemispheres 47.5
2246 Female, age 85, both hemispheres 46.5
2528 Male, age 74, both hemispheres 44.1
2010 Male, age 76, both hemispheres 43.0
2530 Female, age 94, left hemisphere 40.7
Entorhinal gyrus
nTPM: 45.0
2686 Male, age 75, right hemisphere 49.4
2613 Female, age 94, left hemisphere 47.4
2764 Male, age 80, right hemisphere 46.3
1938 Female, age 85, left hemisphere 43.9
2117 Female, age 91, right hemisphere 42.1
1787 Male, age 76, left hemisphere 41.1
Hippocampus, CA1
nTPM: 46.1
2749 Male, age 80, left hemisphere 52.2
2082 Female, age 91, right hemisphere 45.4
2527 Male, age 74, both hemispheres 45.4
2045 Male, age 76, both hemispheres 44.0
1873 Female, age 85, both hemispheres 43.7
Hippocampus, CA2
nTPM: 45.6
1963 Male, age 80, left hemisphere 53.6
1892 Male, age 76, both hemispheres 46.0
2113 Female, age 91, right hemisphere 44.8
1940 Female, age 85, left hemisphere 43.1
2249 Male, age 74, both hemispheres 43.1
2437 Female, age 94, left hemisphere 42.9
Hippocampus, CA3
nTPM: 48.2
2137 Male, age 80, left hemisphere 55.7
2620 Female, age 94, left hemisphere 52.9
2861 Female, age 67, both hemispheres 46.6
1891 Female, age 85, both hemispheres 45.0
1867 Male, age 76, both hemispheres 44.5
2436 Male, age 74, both hemispheres 44.4
Parahippocampal cortex
nTPM: 45.0
2692 Male, age 74, both hemispheres 47.5
1933 Female, age 85, both hemispheres 46.7
2622 Female, age 67, right hemisphere 46.7
1850 Male, age 80, both hemispheres 46.0
2693 Female, age 94, both hemispheres 45.9
2245 Female, age 91, both hemispheres 45.6
1990 Female, age 91, right hemisphere 45.0
2018 Male, age 76, both hemispheres 42.3
2532 Female, age 72, left hemisphere 42.1
2250 Female, age 67, right hemisphere 42.0
Perirhinal gyrus
nTPM: 46.0
1847 Female, age 91, left hemisphere 48.3
1794 Male, age 80, right hemisphere 47.1
1841 Female, age 85, right hemisphere 47.0
2521 Female, age 94, right hemisphere 44.3
2848 Male, age 76, right hemisphere 43.2
Subiculum
nTPM: 44.3
2042 Male, age 76, both hemispheres 47.2
2729 Female, age 91, right hemisphere 45.1
2619 Male, age 74, both hemispheres 45.0
1901 Male, age 80, both hemispheres 44.1
1977 Female, age 85, both hemispheres 43.8
2438 Female, age 94, left hemisphere 40.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 28.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.6
Samples: 197

Max nTPM: 55.1
Min nTPM: 17.8
Std nTPM: 6.0
Median nTPM: 27.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 55.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 50.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 48.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 45.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 44.7
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 44.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 43.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 41.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 39.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 38.5
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 38.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 37.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.1
FF:10169-103B7 60 years, female 37.3
FF:10153-102I9 76 years, female 36.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 69.0
Pig sample Sample description nTPM
Subiculum
nTPM: 56.5
Samples: 4

Max nTPM: 69.0
Min nTPM: 50.2
Sample A Female 69.0
Sample B Female 50.2
Sample C Male 55.5
Sample D Male 51.3
Dorsal hippocampus
nTPM: 69.0
Samples: 4

Max nTPM: 90.0
Min nTPM: 52.4
Sample A Female 90.0
Sample B Female 69.5
Sample C Male 63.9
Sample D Male 52.4
Entorhinal cortex
nTPM: 55.8
Samples: 4

Max nTPM: 62.1
Min nTPM: 48.4
Sample A Female 62.1
Sample B Female 52.6
Sample C Male 59.9
Sample D Male 48.4
Ventral hippocampus
nTPM: 64.5
Samples: 4

Max nTPM: 74.5
Min nTPM: 48.1
Sample A Female 62.7
Sample B Female 48.1
Sample C Male 72.8
Sample D Male 74.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 68.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 66.6
Samples: 4

Max nTPM: 70.9
Min nTPM: 62.9
Sample A Male 68.1
Sample B Male 62.9
Sample C Female 64.5
Sample D Female 70.9
Hippocampal formation
nTPM: 68.9
Samples: 4

Max nTPM: 75.9
Min nTPM: 66.2
Sample A Male 66.8
Sample B Male 66.2
Sample C Female 75.9
Sample D Female 66.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
68203438 Antisense, RP_041018_01_B05, Mouse strain C57BL/6J (56 days, male) 2.0
67855413 Antisense, RP_041018_01_B05, Mouse strain C57BL/6J (56 days, male) 1.3

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