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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
34.7
nTPM
HPA Brain:
96.1
nTPM
GTEx:
34.7
nTPM
FANTOM5:
27.1
Scaled Tags Per Million
Pig:
25.5
nTPM
Mouse:
39.4
nTPM
Allen mouse:
16.8
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
96.1
Sample id
Sample description
nTPM
Amygdala nTPM: 45.4
2517
Female, age 94, left hemisphere
69.8
1987
Female, age 91, left hemisphere
57.9
2814
Male, age 76, right hemisphere
37.7
2514
Male, age 75, right hemisphere
37.4
2695
Female, age 67, right hemisphere
24.4
Basal amygdala nTPM: 90.3
2243
Female, age 91, right hemisphere
129.3
2685
Female, age 94, left hemisphere
116.5
2827
Female, age 67, right hemisphere
104.3
2110
Male, age 80, left hemisphere
81.9
1955
Male, age 76, both hemispheres
55.9
2609
Male, age 75, right hemisphere
54.0
Central amygdala nTPM: 62.3
2239
Male, age 80, left hemisphere
90.0
2826
Female, age 94, left hemisphere
69.5
2701
Female, age 91, right hemisphere
60.0
1905
Male, age 76, both hemispheres
47.2
2515
Male, age 75, right hemisphere
45.0
Corticomedial amygdala nTPM: 96.1
2242
Female, age 91, right hemisphere
134.8
2535
Female, age 67, right hemisphere
133.4
2829
Male, age 80, left hemisphere
100.5
2429
Female, age 94, left hemisphere
89.5
2240
Male, age 76, both hemispheres
60.1
2428
Male, age 75, right hemisphere
58.4
Lateral amygdala nTPM: 60.7
2534
Female, age 94, left hemisphere
86.5
2255
Female, age 91, right hemisphere
74.8
2256
Male, age 80, left hemisphere
74.8
2830
Female, age 67, right hemisphere
49.6
1883
Male, age 76, both hemispheres
47.0
2516
Male, age 75, right hemisphere
31.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
34.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 34.7
Samples: 152
Max nTPM: 80.1
Min nTPM: 3.8
Std nTPM: 14.0
Median nTPM: 33.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
80.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
68.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
66.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
63.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
63.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
61.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
60.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
59.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
59.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
57.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
57.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
56.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
54.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
53.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
53.6
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
53.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
52.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
52.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
52.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
52.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
52.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
52.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
51.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
51.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
50.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
50.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
49.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
49.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
48.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
47.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
47.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
47.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
46.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
46.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
45.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
45.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
44.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
44.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
43.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
43.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
42.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
41.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
41.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
40.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
40.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
40.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
40.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
40.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
39.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
39.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
39.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
39.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
39.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
38.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
38.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
38.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
38.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
38.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
37.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
37.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
37.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
36.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
36.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
36.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
35.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
35.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
35.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
35.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
35.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
34.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
34.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
34.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
33.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
33.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
33.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
33.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
33.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
33.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
33.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
32.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
32.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
32.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
32.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
32.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
31.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
31.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
31.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
30.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
30.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
30.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
30.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
30.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
30.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
30.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
30.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
30.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
29.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
29.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
29.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
28.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
28.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
27.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
27.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
26.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
26.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
26.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
26.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
26.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
25.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
25.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
25.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
25.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
25.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
24.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
24.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
24.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
24.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
24.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
23.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
23.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
22.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
22.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
21.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
21.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
20.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
20.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
20.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
20.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
19.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
18.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
18.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
18.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
17.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
17.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
17.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
17.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
17.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
17.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
17.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
16.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
16.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
16.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
15.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
15.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
15.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
14.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
14.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
13.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
7.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
7.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
5.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
3.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
39.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 39.4
Samples: 4
Max nTPM: 40.4
Min nTPM: 38.7
Sample A
Male
40.4
Sample B
Male
38.7
Sample C
Female
39.0
Sample D
Female
39.6
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
