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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPL28 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1473.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
5834.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
5412.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
5248.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
4686.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
4641.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
4603.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
4542.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
4433.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
4202.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
4099.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
4082.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
4001.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
3882.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
3861.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
3574.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
3541.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3532.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
3335.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
3291.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
3287.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
3287.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
3159.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
3153.4
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
3076.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3069.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3017.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
2996.6
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
2995.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
2985.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
2946.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
2935.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
2843.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
2754.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
2739.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2738.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
2705.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
2701.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
2690.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
2689.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
2637.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
2615.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
2610.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
2561.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
2496.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
2460.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
2352.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
2310.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
2289.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
2277.6
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2275.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
2274.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2268.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
2241.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
2219.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2206.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
2179.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
2153.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
2139.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
2121.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
2057.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2057.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
2046.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
2038.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
2031.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2027.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
2025.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
2024.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
2021.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
2015.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
1965.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1961.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
1954.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1943.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
1934.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
1934.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
1915.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
1913.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
1910.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
1884.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
1880.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
1865.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
1860.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
1855.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
1841.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
1836.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
1834.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
1774.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
1767.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
1765.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
1756.7
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
1750.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
1747.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
1729.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
1718.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
1708.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
1688.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
1687.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
1664.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
1657.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
1645.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1627.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
1625.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
1614.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
1555.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
1552.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1540.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1519.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
1515.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
1488.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
1488.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
1486.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
1482.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
1479.7
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
1477.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
1473.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
1472.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
1472.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
1466.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
1457.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
1455.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
1453.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
1443.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
1442.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
1432.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1420.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
1419.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
1417.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
1401.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
1399.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
1396.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
1387.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
1382.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
1381.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
1380.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
1373.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
1372.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
1370.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
1369.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
1360.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
1359.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
1353.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
1352.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
1351.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
1348.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
1348.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
1346.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1344.3
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
1342.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
1329.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
1326.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1324.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
1323.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
1319.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
1318.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
1317.7
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
1315.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
1309.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
1299.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1293.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
1290.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
1283.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
1282.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
1282.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
1282.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
1280.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
1271.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
1266.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
1259.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
1257.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
1257.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
1255.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
1252.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
1247.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
1247.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
1244.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
1244.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
1239.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
1237.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
1236.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
1236.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
1236.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1233.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1227.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
1226.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
1223.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
1221.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
1219.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
1213.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
1212.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
1209.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
1205.2
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
1193.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
1193.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
1192.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
1189.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
1188.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
1186.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
1182.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
1180.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
1180.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
1177.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
1171.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
1170.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1162.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
1159.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
1155.7
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
1148.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
1146.4
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1144.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1136.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
1131.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
1122.7
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
1117.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
1117.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
1113.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
1105.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
1104.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
1100.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
1091.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
1087.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
1085.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
1081.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
1080.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
1070.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
1068.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
1053.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
1043.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1041.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
1033.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
1027.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
1025.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1022.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
1018.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
1017.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
1011.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
1001.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
994.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
987.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
985.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
983.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
981.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
978.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
974.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
972.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
972.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
969.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
968.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
967.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
960.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
956.8
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
955.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
955.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
954.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
947.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
940.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
939.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
935.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
926.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
925.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
918.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
913.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
906.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
905.7
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
905.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
897.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
896.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
894.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
890.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
889.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
883.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
881.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
878.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
872.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
872.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
858.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
856.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
853.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
852.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
851.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
846.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
846.4
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
846.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
843.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
839.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
835.8
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
835.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
833.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
829.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
828.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
820.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
818.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
802.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
799.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
798.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
780.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
779.5
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
777.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
776.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
773.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
773.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
766.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
762.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
761.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
751.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
751.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
749.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
748.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
742.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
735.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
735.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
735.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
734.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
732.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
731.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
730.5
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
726.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
725.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
724.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
723.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
722.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
722.0
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
713.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
709.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
691.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
689.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
687.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
685.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
678.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
669.9
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
669.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
666.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
659.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
652.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
649.2
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
649.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
646.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
645.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
643.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
641.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
639.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
639.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
637.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
616.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
612.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
608.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
603.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
579.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
569.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
564.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
555.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
546.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
519.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
515.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
515.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
509.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
505.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
493.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
491.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
481.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
465.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
462.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPL28 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
486.9
Number of samples
231
Samples
Sample
Description
TPM
DO45285
0 years, male, NA, stage:3, alive, 480 days
1906.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
1755.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
1719.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
1405.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
1379.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
1351.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
1303.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
1285.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
1224.1
DO23540
0 years, male, NA, stage:1, alive, 750 days
1182.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
1132.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
1128.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
1022.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
1018.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
971.1
DO23515
0 years, male, NA, stage:2, alive, 1230 days
958.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
951.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
945.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
924.1
DO48747
0 years, male, NA, stage:3, alive, 540 days
921.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
913.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
905.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
903.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
899.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
891.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
878.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
864.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
863.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
851.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
826.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
811.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
801.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
793.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
753.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
751.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
713.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
707.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
700.5
DO48737
0 years, male, NA, stage:1, alive, 720 days
693.8
DO23547
0 years, male, NA, stage:1, alive, 1020 days
682.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
677.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
673.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
672.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
665.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
662.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
661.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
657.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
655.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
635.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
631.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
629.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
627.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
623.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
613.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
598.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
591.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
589.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
587.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
584.8
DO48741
0 years, male, NA, stage:3, alive, 240 days
571.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
566.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
558.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
553.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
548.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
539.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
533.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
525.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
523.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
510.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
508.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
504.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
503.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
503.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
501.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
498.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
498.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
497.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
496.7
DO48706
0 years, male, NA, stage:2, alive, 870 days
489.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
488.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
485.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
481.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
479.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
479.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
478.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
478.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
477.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
473.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
466.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
465.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
462.5
DO45153
0 years, female, NA, stage:2, alive, 1380 days
459.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
458.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
457.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
453.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
452.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
452.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
448.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
440.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
436.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
433.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
432.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
426.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
424.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
423.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
416.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
414.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
411.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
410.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
409.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
409.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
407.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
407.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
405.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
400.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
393.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
388.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
388.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
385.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
384.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
383.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
380.5
DO50787
0 years, male, NA, stage:3, alive, 480 days
380.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
378.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
378.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
376.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
375.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
373.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
372.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
372.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
369.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
365.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
365.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
364.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
363.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
363.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
362.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
361.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
357.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
356.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
356.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
353.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
351.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
350.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
348.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
345.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
342.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
341.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
341.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
341.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
336.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
331.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
329.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
329.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
327.6
DO23512
0 years, male, NA, stage:1, alive, 1260 days
323.4
DO45107
0 years, female, NA, stage:2, alive, 1710 days
322.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
319.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
319.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
317.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
316.9
DO45177
0 years, female, NA, stage:3, alive, 1260 days
313.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
312.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
312.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
310.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
310.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
309.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
308.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
307.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
304.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
304.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
303.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
302.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
300.1
DO50844
0 years, male, NA, stage:4, alive, 300 days
299.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
297.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
296.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
296.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
293.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
288.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
285.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
281.8
DO227801
0 years, female, NA, stage:1, alive, 660 days
281.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
277.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
276.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
273.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
272.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
270.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
268.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
268.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
267.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
265.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
265.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
263.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
263.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
263.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
261.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
256.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
256.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
250.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
249.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
248.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
242.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
234.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
223.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
222.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
221.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
211.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
209.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
209.4
DO48677
0 years, male, NA, stage:3, alive, 1140 days
206.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
202.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
201.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
194.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
190.6
DO48761
0 years, male, NA, stage:2, alive, 870 days
189.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
189.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
183.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
178.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
176.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
176.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
169.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
168.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
158.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
156.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
150.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
141.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
139.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
137.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
126.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
74.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
557
Tumor
0.7
537
Tumor
0.7
327
Tumor
0.5
367
Tumor
0.4
567
Tumor
0.4
1021
Tumor
0.4
685
Tumor
0.4
331
Tumor
0.4
955
Tumor
0.4
937
Tumor
0.4
113
Tumor
0.3
965
Tumor
0.3
467
Tumor
0.3
353
Tumor
0.3
661
Tumor
0.3
636
Normal
0.3
545
Tumor
0.3
135
Tumor
0.3
481
Tumor
0.3
851
Tumor
0.3
413
Tumor
0.3
223
Tumor
0.3
527
Tumor
0.3
285
Tumor
0.3
131
Tumor
0.3
866
Normal
0.3
524
Normal
0.3
332
Normal
0.3
724
Normal
0.3
944
Normal
0.3
443
Tumor
0.3
195
Tumor
0.3
743
Tumor
0.3
497
Tumor
0.2
212
Normal
0.2
278
Normal
0.2
523
Tumor
0.2
533
Tumor
0.2
1025
Tumor
0.2
721
Tumor
0.2
617
Tumor
0.2
815
Tumor
0.2
756
Normal
0.2
314
Normal
0.2
535
Tumor
0.2
395
Tumor
0.2
514
Normal
0.2
412
Normal
0.2
873
Tumor
0.2
518
Normal
0.2
553
Tumor
0.2
393
Tumor
0.2
918
Normal
0.2
1027
Tumor
0.2
628
Normal
0.2
957
Tumor
0.2
172
Normal
0.2
387
Tumor
0.2
232
Normal
0.2
267
Tumor
0.2
355
Tumor
0.2
824
Normal
0.2
517
Tumor
0.2
534
Normal
0.2
513
Tumor
0.2
696
Normal
0.2
546
Normal
0.2
358
Normal
0.2
983
Tumor
0.2
554
Normal
0.2
713
Tumor
0.2
187
Tumor
0.2
528
Normal
0.2
515
Tumor
0.2
211
Tumor
0.2
723
Tumor
0.2
922
Normal
0.2
951
Tumor
0.2
474
Normal
0.2
777
Tumor
0.2
356
Normal
0.2
376
Normal
0.2
526
Normal
0.2
471
Tumor
0.2
727
Tumor
0.2
882
Normal
0.2
421
Tumor
0.2
954
Normal
0.2
938
Normal
0.2
258
Normal
0.2
738
Normal
0.2
257
Tumor
0.1
162
Normal
0.1
1044
Normal
0.1
686
Normal
0.1
385
Tumor
0.1
648
Normal
0.1
432
Normal
0.1
956
Normal
0.1
564
Normal
0.1
664
Normal
0.1
571
Tumor
0.1
414
Normal
0.1
446
Normal
0.1
745
Tumor
0.1
448
Normal
0.1
363
Tumor
0.1
462
Normal
0.1
558
Normal
0.1
573
Tumor
0.1
1026
Normal
0.1
434
Normal
0.1
984
Normal
0.1
864
Normal
0.1
755
Tumor
0.1
865
Tumor
0.1
436
Normal
0.1
568
Normal
0.1
352
Normal
0.1
368
Normal
0.1
728
Normal
0.1
952
Normal
0.1
1032
Normal
0.1
191
Tumor
0.1
516
Normal
0.1
277
Tumor
0.1
227
Tumor
0.1
1014
Normal
0.1
298
Normal
0.1
228
Normal
0.1
953
Tumor
0.1
364
Normal
0.1
473
Tumor
0.1
415
Tumor
0.1
884
Normal
0.1
878
Normal
0.1
858
Normal
0.1
411
Tumor
0.1
778
Normal
0.1
926
Normal
0.1
128
Normal
0.1
1031
Tumor
0.1
923
Tumor
0.1
981
Tumor
0.1
123
Tumor
0.1
342
Normal
0.1
1042
Normal
0.1
1022
Normal
0.1
196
Normal
0.1
958
Normal
0.1
366
Normal
0.1
852
Normal
0.1
572
Normal
0.1
114
Normal
0.1
525
Tumor
0.1
137
Tumor
0.1
392
Normal
0.1
455
Tumor
0.1
261
Tumor
0.1
362
Normal
0.1
818
Normal
0.1
817
Tumor
0.1
466
Normal
0.1
231
Tumor
0.1
867
Tumor
0.1
286
Normal
0.1
714
Normal
0.1
136
Normal
0.1
916
Normal
0.1
615
Tumor
0.1
375
Tumor
0.1
312
Normal
0.1
142
Normal
0.1
297
Tumor
0.1
742
Normal
0.1
262
Normal
0.1
857
Tumor
0.1
488
Normal
0.1
147
Tumor
0.1
185
Tumor
0.1
943
Tumor
0.1
431
Tumor
0.1
493
Tumor
0.1
171
Tumor
0.1
618
Normal
0.1
494
Normal
0.1
538
Normal
0.1
982
Normal
0.1
715
Tumor
0.1
484
Normal
0.1
344
Normal
0.1
222
Normal
0.1
148
Normal
0.1
1028
Normal
0.1
433
Tumor
0.1
978
Normal
0.1
616
Normal
0.1
384
Normal
0.1
425
Tumor
0.1
354
Normal
0.0
671
Tumor
0.0
964
Normal
0.0
785
Tumor
0.0
912
Normal
0.0
422
Normal
0.0
427
Tumor
0.0
451
Tumor
0.0
746
Normal
0.0
574
Normal
0.0
111
Normal
0.0
214
Normal
0.0
186
Normal
0.0
563
Tumor
0.0
124
Normal
0.0
428
Normal
0.0
913
Tumor
0.0
492
Normal
0.0
221
Tumor
0.0
424
Normal
0.0
394
Normal
0.0
1015
Tumor
0.0
1016
Normal
0.0
351
Tumor
0.0
722
Normal
0.0
672
Normal
0.0
272
Normal
0.0
862
Normal
0.0
328
Normal
0.0
666
Normal
0.0
188
Normal
0.0
635
Tumor
0.0
716
Normal
0.0
284
Normal
0.0
145
Tumor
0.0
967
Tumor
0.0
213
Tumor
0.0
313
Tumor
0.0
786
Normal
0.0
478
Normal
0.0
127
Tumor
0.0
396
Normal
0.0
881
Tumor
0.0
963
Tumor
0.0
975
Tumor
0.0
161
Tumor
0.0
463
Tumor
0.0
341
Tumor
0.0
365
Tumor
0.0
388
Normal
0.0
697
Tumor
0.0
1046
Normal
0.0
924
Normal
0.0
966
Normal
0.0
536
Normal
0.0
483
Tumor
0.0
468
Normal
0.0
472
Normal
0.0
343
Tumor
0.0
112
Tumor
0.0
662
Normal
0.0
271
Tumor
0.0
874
Normal
0.0
642
Normal
0.0
641
Tumor
0.0
224
Normal
0.0
695
Tumor
0.0
268
Normal
0.0
1043
Tumor
0.0
126
Normal
0.0
976
Normal
0.0
477
Tumor
0.0
665
Tumor
-0.1
464
Normal
-0.1
968
Normal
-0.1
465
Tumor
-0.1
861
Tumor
-0.1
482
Normal
-0.1
737
Tumor
-0.1
132
Normal
-0.1
461
Tumor
-0.1
416
Normal
-0.1
138
Normal
-0.1
883
Tumor
-0.1
391
Tumor
-0.1
141
Tumor
-0.1
217
Tumor
-0.1
435
Tumor
-0.1
816
Normal
-0.1
925
Tumor
-0.1
283
Tumor
-0.1
921
Tumor
-0.1
698
Normal
-0.1
386
Normal
-0.1
447
Tumor
-0.1
426
Normal
-0.1
487
Tumor
-0.1
452
Normal
-0.1
663
Tumor
-0.1
915
Tumor
-0.1
445
Tumor
-0.1
823
Tumor
-0.1
1041
Tumor
-0.1
444
Normal
-0.1
423
Tumor
-0.1
814
Normal
-0.1
125
Tumor
-0.1
146
Normal
-0.1
813
Tumor
-0.1
456
Normal
-0.1
361
Tumor
-0.1
647
Tumor
-0.1
1013
Tumor
-0.2
218
Normal
-0.2
877
Tumor
-0.2
498
Normal
-0.2
977
Tumor
-0.2
357
Tumor
-0.2
863
Tumor
-0.2
744
Normal
-0.2
383
Tumor
-0.2
627
Tumor
-0.2
868
Normal
-0.2
192
Normal
-0.3
911
Tumor
-0.3
914
Normal
-0.3
1045
Tumor
-0.3
491
Tumor
-0.3
917
Tumor
-0.3
311
Tumor
-0.3
741
Tumor
-0.3
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.