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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBE2S is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
302.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
217.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
164.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
136.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
131.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
123.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
115.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
101.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
100.7
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
96.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
93.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
92.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
91.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
90.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
87.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
85.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
82.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
82.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
80.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
77.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
73.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
72.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
70.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
68.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
68.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
67.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
67.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
63.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
62.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
62.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
61.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
60.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
60.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
60.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
60.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
60.1
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
59.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
59.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
58.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
58.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
58.4
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
57.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
56.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
55.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
55.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
54.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
54.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
53.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
53.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
53.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
52.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
52.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
52.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
51.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
51.1
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
50.8
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
50.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
49.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
47.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
46.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
45.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
45.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
44.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
44.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
44.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
43.7
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
42.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
41.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
41.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
41.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
41.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
41.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
40.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
40.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
40.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
40.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
40.6
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
40.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
40.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
39.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
39.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
39.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
39.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
39.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
38.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
38.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
38.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
38.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
38.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
38.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
37.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
37.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
37.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
37.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
36.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
35.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
35.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
35.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
34.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
34.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
34.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
34.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
33.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
33.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
32.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
32.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
32.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
32.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
31.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
31.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
30.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
30.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
30.3
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
30.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
29.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
29.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
29.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
29.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
28.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
28.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
28.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
28.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
28.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
28.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
27.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
27.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
27.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
27.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
26.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
26.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
26.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
26.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
26.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
25.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
25.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
25.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
25.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
25.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
25.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
25.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
25.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
25.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
25.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
25.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
25.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
25.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
25.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
24.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
24.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
24.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
24.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
24.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
24.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
24.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
24.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
23.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
23.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
23.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
23.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
23.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
23.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
23.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
23.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
23.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
22.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
22.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
22.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
22.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
22.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
22.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
21.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
21.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
21.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
21.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
21.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
21.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
21.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
21.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
20.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
20.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
20.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
20.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
20.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
20.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
20.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
20.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
20.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
20.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
20.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
20.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
19.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
19.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
19.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
19.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
19.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
19.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
19.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
19.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
18.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
18.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
18.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
18.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
18.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
18.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
18.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
18.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
18.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
18.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
18.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
17.9
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
17.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
17.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
17.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
17.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
17.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
17.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
16.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
16.7
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
16.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
16.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
16.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
16.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
16.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
16.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
16.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
16.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
15.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
15.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
15.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
15.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
15.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
15.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
15.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
15.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
15.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
15.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
15.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
15.4
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
15.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
15.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
14.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
14.9
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
14.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
14.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
14.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
14.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
14.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
14.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
14.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
14.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
13.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
13.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
13.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
13.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
13.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
13.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
13.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
13.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
13.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
13.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
13.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
12.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
12.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
12.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
12.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
12.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
12.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
12.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
12.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
12.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
12.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
12.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
11.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
11.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
11.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
11.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
11.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
11.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
11.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
11.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
11.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
11.6
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
11.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
11.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
11.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
11.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
11.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
11.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
11.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
10.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
10.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
10.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
10.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
10.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
10.7
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
10.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
10.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
10.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
10.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
10.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
10.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
10.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
10.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
10.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
10.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
10.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
10.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
10.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
9.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
9.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
9.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
9.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
9.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
9.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
9.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
9.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
9.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
9.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
9.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
9.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
9.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
9.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
9.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
9.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
9.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
9.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
8.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
8.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
8.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
8.5
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
8.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
8.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
7.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
7.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
7.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
7.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
7.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
7.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
7.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
7.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
6.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
6.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
6.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
6.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
6.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
6.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
6.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
6.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
6.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
6.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
5.9
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
5.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
5.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
5.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
5.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
5.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
4.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
4.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
4.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
4.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBE2S is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.5
Number of samples
231
Samples
Sample
Description
TPM
DO45211
0 years, male, NA, stage:3, alive, 240 days
114.5
DO45093
0 years, male, NA, stage:2, dead, 720 days
112.5
DO45275
0 years, male, NA, stage:3, dead, 10 days
111.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
93.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
88.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
83.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
83.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
82.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
81.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
73.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
73.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
66.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
65.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
64.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
62.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
55.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
54.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
52.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
52.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
45.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
44.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
41.2
DO48717
0 years, male, NA, stage:4, dead, 180 days
37.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
37.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
36.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
35.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
35.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
34.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
34.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
32.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
32.6
DO45289
0 years, female, NA, stage:3, alive, 360 days
31.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
31.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
31.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
31.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
30.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
30.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
30.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
29.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
29.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
28.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
28.7
DO45139
0 years, male, NA, stage:3, alive, 1320 days
28.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
28.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
28.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
26.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
25.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
25.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
25.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
24.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
24.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
24.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
24.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
24.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
24.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
24.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
24.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
24.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
23.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
23.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
23.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
22.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
22.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
22.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
21.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
21.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
21.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
21.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
21.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
20.8
DO48720
0 years, female, NA, stage:2, alive, 570 days
20.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
20.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
20.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
20.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
20.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
20.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
19.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
19.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
18.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
18.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
18.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
18.5
DO45153
0 years, female, NA, stage:2, alive, 1380 days
18.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
18.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
18.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
18.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
18.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
18.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
17.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
17.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
17.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
17.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
17.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
17.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
17.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
17.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
16.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
16.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
16.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
16.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
16.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
16.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
16.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
16.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
16.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
16.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
16.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
15.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
15.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
15.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
15.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
15.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
15.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
14.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
14.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
14.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
14.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
14.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
14.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
14.1
DO23530
0 years, male, NA, stage:4, dead, 180 days
14.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
13.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
13.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
13.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
13.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
13.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
13.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
13.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
13.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
13.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
13.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
12.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
12.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
12.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
12.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
12.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
11.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
11.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
11.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
11.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
11.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
11.6
DO45253
0 years, male, NA, stage:2, alive, 870 days
11.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
11.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
11.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
11.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
10.9
DO50783
0 years, male, NA, stage:3, alive, 480 days
10.8
DO23550
0 years, male, NA, stage:1, alive, 990 days
10.7
DO23543
0 years, male, NA, stage:2, alive, 1020 days
10.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
10.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
10.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
10.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
10.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
10.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
10.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
10.1
DO45251
0 years, female, NA, stage:2, alive, 900 days
10.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
10.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
10.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
9.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
9.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
9.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
9.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
9.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
9.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
9.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
9.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
9.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
9.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
9.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
8.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
8.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
8.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
8.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
8.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
8.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
8.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
8.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
8.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
8.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
8.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
8.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
8.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
8.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
7.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
7.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
7.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
7.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
7.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
7.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
7.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
7.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
7.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
7.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
7.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
7.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
6.9
DO45121
0 years, male, NA, stage:3, alive, 1530 days
6.9
DO50816
0 years, male, NA, stage:2, alive, 390 days
6.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
6.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
6.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
6.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
6.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
6.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
6.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
6.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
6.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
6.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
6.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
6.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
6.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
5.9
DO45167
0 years, male, NA, stage:2, dead, 1440 days
5.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
5.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
5.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
5.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
5.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
5.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
5.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
5.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
5.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
5.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
4.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
4.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
3.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
3.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
3.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
2.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
2.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
2.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
865
Tumor
1.8
283
Tumor
1.6
285
Tumor
1.3
497
Tumor
1.2
537
Tumor
1.1
957
Tumor
1.1
211
Tumor
1.0
161
Tumor
1.0
951
Tumor
1.0
697
Tumor
1.0
343
Tumor
0.9
813
Tumor
0.8
351
Tumor
0.7
491
Tumor
0.7
425
Tumor
0.6
357
Tumor
0.6
1013
Tumor
0.6
983
Tumor
0.6
447
Tumor
0.6
965
Tumor
0.5
943
Tumor
0.5
953
Tumor
0.5
427
Tumor
0.5
231
Tumor
0.5
535
Tumor
0.4
814
Normal
0.4
421
Tumor
0.4
136
Normal
0.4
413
Tumor
0.4
131
Tumor
0.4
967
Tumor
0.4
554
Normal
0.3
428
Normal
0.3
267
Tumor
0.3
527
Tumor
0.3
424
Normal
0.3
493
Tumor
0.3
978
Normal
0.2
145
Tumor
0.2
982
Normal
0.2
1014
Normal
0.2
341
Tumor
0.2
147
Tumor
0.2
873
Tumor
0.2
426
Normal
0.2
487
Tumor
0.2
223
Tumor
0.1
423
Tumor
0.1
861
Tumor
0.1
135
Tumor
0.1
227
Tumor
0.1
138
Normal
0.1
863
Tumor
0.1
414
Normal
0.1
483
Tumor
0.1
185
Tumor
0.1
494
Normal
0.1
257
Tumor
0.1
984
Normal
0.1
137
Tumor
0.1
498
Normal
0.1
533
Tumor
0.1
488
Normal
0.0
132
Normal
0.0
755
Tumor
0.0
1016
Normal
0.0
745
Tumor
0.0
484
Normal
0.0
342
Normal
0.0
1045
Tumor
0.0
358
Normal
0.0
422
Normal
0.0
958
Normal
-0.1
937
Tumor
-0.1
545
Tumor
-0.1
977
Tumor
-0.1
1046
Normal
-0.1
528
Normal
-0.1
777
Tumor
-0.1
187
Tumor
-0.1
141
Tumor
-0.1
352
Normal
-0.2
536
Normal
-0.2
966
Normal
-0.2
963
Tumor
-0.2
785
Tumor
-0.2
171
Tumor
-0.2
344
Normal
-0.2
271
Tumor
-0.2
1043
Tumor
-0.2
968
Normal
-0.2
354
Normal
-0.3
492
Normal
-0.3
964
Normal
-0.3
224
Normal
-0.3
976
Normal
-0.3
975
Tumor
-0.3
353
Tumor
-0.3
534
Normal
-0.4
232
Normal
-0.4
286
Normal
-0.4
981
Tumor
-0.4
956
Normal
-0.4
1015
Tumor
-0.4
188
Normal
-0.4
261
Tumor
-0.4
172
Normal
-0.5
1044
Normal
-0.5
262
Normal
-0.5
142
Normal
-0.5
756
Normal
-0.5
258
Normal
-0.5
944
Normal
-0.5
954
Normal
-0.5
162
Normal
-0.5
284
Normal
-0.5
786
Normal
-0.5
186
Normal
-0.5
746
Normal
-0.5
698
Normal
-0.5
868
Normal
-0.5
778
Normal
-0.5
938
Normal
-0.5
448
Normal
-0.6
955
Tumor
-0.6
268
Normal
-0.6
866
Normal
-0.6
148
Normal
-0.6
146
Normal
-0.7
864
Normal
-0.7
862
Normal
-0.7
952
Normal
-0.7
272
Normal
-0.7
212
Normal
-0.7
546
Normal
-0.8
228
Normal
-0.8
553
Tumor
-0.9
538
Normal
-1.0
867
Tumor
-1.0
874
Normal
-1.0
471
Tumor
N/A
472
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
474
Normal
N/A
112
Tumor
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
478
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
363
Tumor
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
125
Tumor
N/A
367
Tumor
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
817
Tumor
N/A
818
Normal
N/A
383
Tumor
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
387
Tumor
N/A
388
Normal
N/A
823
Tumor
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
392
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
278
Normal
N/A
713
Tumor
N/A
714
Normal
N/A
715
Tumor
N/A
716
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
722
Normal
N/A
723
Tumor
N/A
724
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1042
Normal
N/A
1041
Tumor
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
615
Tumor
N/A
857
Tumor
N/A
616
Normal
N/A
737
Tumor
N/A
858
Normal
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
741
Tumor
N/A
742
Normal
N/A
743
Tumor
N/A
744
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
513
Tumor
N/A
514
Normal
N/A
635
Tumor
N/A
877
Tumor
N/A
515
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
648
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
415
Tumor
N/A
416
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
663
Tumor
N/A
664
Normal
N/A
665
Tumor
N/A
666
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
312
Normal
N/A
433
Tumor
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
685
Tumor
N/A
444
Normal
N/A
686
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
328
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
452
Normal
N/A
573
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
695
Tumor
N/A
696
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
463
Tumor
N/A
222
Normal
N/A
464
Normal
N/A
465
Tumor
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
