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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UNC5B is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
28.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
25.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
25.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
22.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
20.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
17.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
17.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
16.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
13.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
11.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
10.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
9.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
9.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
8.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
8.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
8.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
8.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
7.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
7.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
7.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
7.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
7.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
7.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
6.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
6.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
6.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
6.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
6.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
6.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
5.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
5.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
5.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
5.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
5.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
5.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
4.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
4.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
4.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
4.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
4.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
4.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
3.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
3.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
3.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
3.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
3.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
3.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
3.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
3.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
2.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
2.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
2.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
2.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
2.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
2.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
2.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
1.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
1.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
1.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
1.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UNC5B is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
116.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
104.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
96.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
93.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
90.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
90.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
86.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
75.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
75.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
68.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
67.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
64.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
63.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
62.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
61.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
61.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
60.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
58.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
57.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
57.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
56.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
56.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
56.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
55.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
54.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
54.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
54.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
53.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
53.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
52.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
51.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
51.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
51.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
51.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
50.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
50.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
49.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
49.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
48.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
47.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
47.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
46.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
46.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
46.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
46.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
45.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
45.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
45.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
44.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
44.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
43.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
43.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
43.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
42.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
42.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
41.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
41.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
41.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
41.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
41.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
40.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
40.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
40.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
39.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
39.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
38.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
38.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
38.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
38.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
38.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
38.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
38.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
37.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
37.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
37.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
37.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
37.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
37.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
36.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
36.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
36.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
36.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
35.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
35.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
35.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
35.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
35.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
35.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
35.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
34.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
34.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
34.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
34.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
34.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
33.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
33.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
33.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
33.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
33.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
33.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
33.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
32.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
32.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
32.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
32.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
32.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
32.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
32.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
32.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
31.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
31.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
31.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
31.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
31.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
31.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
31.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
31.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
31.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
30.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
30.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
30.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
30.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
30.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
30.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
30.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
29.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
29.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
29.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
29.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
29.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
28.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
28.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
28.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
28.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
28.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
28.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
28.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
28.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
28.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
28.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
28.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
28.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
28.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
27.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
27.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
27.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
27.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
27.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
27.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
27.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
27.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
26.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
26.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
26.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
26.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
26.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
26.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
26.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
26.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
26.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
26.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
25.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
25.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
25.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
25.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
25.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
25.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
25.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
24.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
24.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
24.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
24.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
24.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
24.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
24.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
24.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
24.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
24.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
24.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
24.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
24.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
24.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
24.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
24.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
23.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
23.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
23.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
23.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
23.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
23.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
23.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
23.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
23.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
23.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
23.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
22.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
22.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
22.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
22.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
22.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
22.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
22.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
22.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
22.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
22.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
22.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
22.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
22.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
22.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
22.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
22.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
22.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
21.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
21.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
21.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
21.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
21.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
21.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
21.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
21.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
21.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
21.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
21.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
21.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
21.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
21.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
21.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
20.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
20.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
20.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
20.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
20.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
20.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
20.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
20.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
20.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
20.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
20.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
20.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
20.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
20.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
20.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
19.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
19.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
19.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
19.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
19.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
19.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
19.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
19.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
19.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
19.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
19.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
19.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
19.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
19.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
19.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
18.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
18.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
18.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
18.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
18.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
18.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
18.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
18.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
18.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
18.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
18.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
18.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
18.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
18.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
18.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
18.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
18.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
17.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
17.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
17.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
17.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
17.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
17.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
17.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
17.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
17.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
17.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
17.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
17.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
17.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
17.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
17.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
17.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
16.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
16.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
16.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
16.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
16.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
16.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
16.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
16.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
16.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
16.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
16.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
16.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
16.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
16.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
16.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
16.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
15.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
15.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
15.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
15.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
15.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
15.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
15.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
15.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
15.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
15.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
15.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
15.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
15.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
15.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
15.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
15.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
15.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
15.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
15.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
15.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
14.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
14.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
14.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
14.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
14.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
14.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
14.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
14.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
14.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
14.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
14.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
14.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
14.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
14.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
14.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
13.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
13.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
13.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
13.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
13.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
13.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
13.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
13.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
13.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
13.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
13.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
13.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
13.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
13.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
13.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
12.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
12.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
12.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
12.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
12.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
12.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
12.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
12.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
12.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
12.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
12.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
12.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
12.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
12.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
12.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
12.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
11.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
11.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
11.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
11.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
11.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
11.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
11.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
11.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
11.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
11.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
11.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
11.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
11.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
11.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
10.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
10.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
10.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
10.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
10.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
10.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
10.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
10.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
10.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
10.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
10.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
10.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
10.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
10.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
10.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
9.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
9.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
9.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
9.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
9.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
9.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
9.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
9.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
9.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
9.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
9.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
9.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
9.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
8.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
8.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
8.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
8.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
8.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
8.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
8.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
8.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
7.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
7.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
7.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
7.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
7.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
7.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
7.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
7.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
7.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
7.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
7.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
7.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
7.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
7.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
7.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
7.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
6.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
6.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
6.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
6.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
6.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
6.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
6.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
6.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
6.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
6.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
6.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
6.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
6.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
5.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
5.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
5.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
5.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
5.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
5.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
5.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
5.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
5.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
5.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
5.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
5.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
5.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
5.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
5.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
5.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
4.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
4.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
4.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
4.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
4.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
4.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
3.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
3.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
3.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
3.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
3.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
3.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
3.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
3.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
2.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
2.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
2.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
2.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
2.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
2.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
2.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
1.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
1.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
1.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
1.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
1.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
1.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
1.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
1.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
1.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
0.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UNC5B is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
134.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
61.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
59.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
55.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
51.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
47.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
47.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
46.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
46.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
44.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
43.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
39.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
39.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
34.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
34.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
34.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
32.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
31.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
31.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
30.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
30.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
29.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
29.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
29.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
29.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
29.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
29.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
28.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
28.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
27.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
27.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
26.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
25.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
25.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
25.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
24.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
23.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
23.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
22.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
21.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
21.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
20.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
20.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
19.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
19.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
19.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
19.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
18.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
18.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
18.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
18.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
18.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
18.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
18.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
18.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
17.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
17.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
16.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
15.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
15.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
14.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
14.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
14.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
14.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
13.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
13.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
13.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
13.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
13.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
12.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
12.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
11.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
10.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
10.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
10.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
9.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
9.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
9.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
8.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
8.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
8.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
8.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
8.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
7.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
7.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
7.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
6.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
6.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
6.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
5.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
5.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
5.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
4.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
4.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
3.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
3.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
3.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
2.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
2.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UNC5B is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
3.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
87.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
49.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
47.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
38.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
26.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
19.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
18.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
17.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
16.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
16.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
15.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
14.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
13.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
13.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
12.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
12.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
12.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
12.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
12.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
10.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
10.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
9.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
9.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
9.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
8.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
8.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
8.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
8.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
8.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
8.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
8.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
7.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
7.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
6.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
6.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
6.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
6.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
6.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
6.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
5.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
5.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
5.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
5.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
5.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
5.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
5.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
4.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
4.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
4.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
4.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
4.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
4.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
4.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
4.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
4.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
4.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
4.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
4.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
4.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
4.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
3.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
3.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
3.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
3.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
3.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
3.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
3.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
3.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
3.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
3.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
3.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
3.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
3.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
3.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
3.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
3.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
3.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
3.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
3.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
3.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
2.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
2.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
2.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
2.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
2.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
2.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
2.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
2.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
2.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
2.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
2.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
2.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
2.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
2.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
2.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
2.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
2.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
2.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
2.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
2.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
2.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
2.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
2.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
2.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
2.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
2.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
2.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
2.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
2.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
2.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
2.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
2.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
2.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
2.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
2.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
2.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
2.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
2.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
1.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
1.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
1.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
1.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
1.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
1.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
1.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
1.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
1.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
1.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
1.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
1.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
1.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
1.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
1.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
1.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
1.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
1.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
1.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
1.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
1.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
1.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
1.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
1.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
1.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
1.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
1.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
1.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
1.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
1.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
1.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
1.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
1.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
1.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
1.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
1.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
1.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
1.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
1.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
1.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
1.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
1.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
1.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
1.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
1.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
1.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
1.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
1.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
1.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
1.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
1.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
1.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
1.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
1.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
1.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
1.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
1.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
1.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
1.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
1.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
1.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
1.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
1.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
1.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
1.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
1.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
1.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
1.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
1.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
1.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
1.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
1.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
1.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
1.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
1.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
1.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
1.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
1.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
1.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
1.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
1.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
1.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
1.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
1.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
1.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
1.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
1.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
0.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
0.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
0.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
0.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
0.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
0.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
0.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
0.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
0.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
0.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
0.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
0.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
0.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
0.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
0.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
0.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
0.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
0.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
0.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
0.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
0.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
0.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
0.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
0.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
0.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
0.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
0.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
0.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
0.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
0.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
0.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
0.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
0.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
0.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
0.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
0.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
0.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
0.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
0.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
0.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
0.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
0.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
0.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
0.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
0.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
0.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
0.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
0.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
0.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
0.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
0.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088970003
Tumor
1.3
CPT0088900003
Tumor
1.1
CPT0077310003
Tumor
1.1
CPT0077490003
Tumor
1.0
CPT0088760003
Tumor
1.0
CPT0092290003
Tumor
1.0
CPT0088630003
Tumor
1.0
CPT0025350003
Tumor
1.0
CPT0078990003
Tumor
0.9
CPT0000870016
Tumor
0.9
CPT0071150004
Tumor
0.9
CPT0079270003
Tumor
0.9
CPT0000640003
Tumor
0.8
CPT0009000003
Tumor
0.8
CPT0014370004
Tumor
0.7
CPT0063320003
Tumor
0.7
CPT0026410003
Tumor
0.7
CPT0087040003
Tumor
0.7
CPT0015910003
Tumor
0.7
CPT0078830003
Tumor
0.7
CPT0089020003
Tumor
0.7
CPT0081620001
Normal
0.6
CPT0078510003
Tumor
0.6
CPT0025880003
Tumor
0.6
CPT0025110003
Tumor
0.6
CPT0006950001
Normal
0.6
CPT0020120003
Tumor
0.6
CPT0066470004
Tumor
0.6
CPT0065690003
Tumor
0.6
CPT0012080003
Tumor
0.5
CPT0009060003
Tumor
0.5
CPT0077500001
Normal
0.5
CPT0075720003
Tumor
0.4
CPT0006900003
Tumor
0.4
CPT0017410003
Tumor
0.4
CPT0021240003
Tumor
0.4
CPT0079480003
Tumor
0.4
CPT0081600003
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0023710001
Normal
0.4
CPT0001340003
Tumor
0.4
CPT0025290003
Tumor
0.3
CPT0087050003
Normal
0.3
CPT0006440003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0075570001
Normal
0.3
CPT0092730003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0025610001
Normal
0.2
CPT0075560003
Tumor
0.2
CPT0010170001
Normal
0.2
CPT0025170003
Tumor
0.2
CPT0079430001
Normal
0.2
CPT0088550004
Tumor
0.2
CPT0023360001
Normal
0.2
CPT0077320001
Normal
0.2
CPT0092740003
Normal
0.1
CPT0010160003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0078840001
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0086970003
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0025060001
Normal
0.0
CPT0081880003
Tumor
0.0
CPT0088690003
Tumor
0.0
CPT0066430001
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0026420001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0002270011
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0014160003
Tumor
-0.1
CPT0010110003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0075130003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0088500001
Normal
-0.2
CPT0079410003
Tumor
-0.2
CPT0009080003
Normal
-0.2
CPT0069160003
Tumor
-0.2
CPT0082010001
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0010120001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0012090003
Normal
-0.2
CPT0012920003
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0065930003
Tumor
-0.2
CPT0002350011
Tumor
-0.2
CPT0020020001
Normal
-0.3
CPT0063640001
Normal
-0.3
CPT0000660001
Normal
-0.3
CPT0086870003
Tumor
-0.3
CPT0088710001
Normal
-0.3
CPT0002370001
Normal
-0.3
CPT0078940001
Normal
-0.3
CPT0014130001
Normal
-0.3
CPT0078670001
Normal
-0.3
CPT0023690003
Tumor
-0.3
CPT0086890003
Normal
-0.3
CPT0088640003
Normal
-0.3
CPT0001190001
Normal
-0.3
CPT0018250001
Normal
-0.4
CPT0009020003
Normal
-0.4
CPT0006530001
Normal
-0.4
CPT0014470001
Normal
-0.4
CPT0023350003
Tumor
-0.4
CPT0092310003
Normal
-0.4
CPT0001350001
Normal
-0.4
CPT0078530001
Normal
-0.5
CPT0079510001
Normal
-0.5
CPT0079000001
Normal
-0.5
CPT0014450004
Tumor
-0.5
CPT0017450001
Normal
-0.5
CPT0092160003
Tumor
-0.5
CPT0020130001
Normal
-0.5
CPT0069190001
Normal
-0.5
CPT0011410003
Tumor
-0.6
CPT0000890001
Normal
-0.6
CPT0014350001
Normal
-0.6
CPT0001180009
Tumor
-0.6
CPT0025050003
Tumor
-0.6
CPT0012640003
Normal
-0.6
CPT0019160001
Normal
-0.7
CPT0075170001
Normal
-0.7
CPT0086950003
Tumor
-0.7
CPT0001230001
Normal
-0.7
CPT0092190003
Normal
-0.8
CPT0079300001
Normal
-0.8
CPT0012180003
Tumor
-0.9
CPT0017850003
Tumor
-0.9
CPT0078660003
Tumor
-1.0
CPT0000790001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0076330003
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0007870001
Normal
N/A
CPT0079380003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0086830003
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0000780007
Tumor
N/A
CPT0001510001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0001550001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0007860003
Tumor
N/A
CPT0079230003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0001500009
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0065450001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0065430003
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0001540009
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0085670003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0086370003
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
