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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NSMCE4A is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
33.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
32.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
31.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
28.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
27.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
26.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
25.6
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
24.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
24.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
24.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
24.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
24.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
24.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
23.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
23.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
23.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
23.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
23.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
23.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
23.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
23.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
23.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
23.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
22.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
22.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
22.5
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
22.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
22.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
22.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
22.4
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
22.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
22.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
22.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
21.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
21.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
21.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
21.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
21.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
20.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
20.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
20.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
20.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
20.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
20.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
20.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
20.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
19.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
19.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
19.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
19.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
19.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
19.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
19.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
18.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
18.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
18.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
18.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
18.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
18.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
18.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
18.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
18.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
18.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
18.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
18.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
18.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
18.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
18.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
17.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
17.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
17.9
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
17.6
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
17.6
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
17.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
17.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
17.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
17.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
17.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
17.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
17.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
17.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
17.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
17.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
17.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
17.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
16.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
16.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
16.7
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
16.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
16.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
16.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
16.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
16.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
16.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
16.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
16.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
16.5
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
16.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
16.4
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
16.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
16.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
16.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
16.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
16.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
16.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
16.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
16.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
16.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
15.9
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
15.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
15.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
15.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
15.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
15.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
15.7
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
15.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
15.7
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
15.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
15.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
15.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
15.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
15.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
15.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
15.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
15.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
15.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
15.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
15.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
15.3
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
15.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
15.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
15.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
15.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
15.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
15.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
14.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
14.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
14.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
14.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
14.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
14.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
14.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
14.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
14.7
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
14.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
14.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
14.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
14.7
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
14.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
14.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
14.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
14.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
14.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
14.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
14.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
14.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
14.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
14.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
14.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
14.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
14.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
14.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
13.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
13.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
13.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
13.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
13.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
13.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
13.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
13.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
13.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
13.6
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
13.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
13.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
13.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
13.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
13.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
13.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
13.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
13.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
13.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
13.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
13.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
13.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
13.1
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
13.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
13.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
13.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
12.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
12.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
12.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
12.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
12.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
12.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
12.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
12.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
12.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
12.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
12.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
12.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
12.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
12.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
12.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
12.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
12.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
12.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
12.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
12.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
12.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
12.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
12.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
12.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
12.1
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
12.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
12.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
12.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
12.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
11.9
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
11.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
11.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
11.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
11.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
11.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
11.7
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
11.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
11.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
11.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
11.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
11.5
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
11.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
11.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
11.4
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
11.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
11.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
11.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
11.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
11.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
11.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
11.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
11.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
11.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
11.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
11.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
11.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
11.1
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
11.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
11.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
11.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
11.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
11.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
11.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
11.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
10.9
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
10.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
10.9
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
10.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
10.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
10.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
10.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
10.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
10.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
10.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
10.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
10.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
10.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
10.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
10.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
10.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
10.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
10.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
10.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
10.1
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
10.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
10.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
10.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
10.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
10.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
10.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
9.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
9.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
9.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
9.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
9.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
9.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
9.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
9.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
9.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
9.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
9.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
9.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
9.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
9.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
9.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
9.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
9.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
9.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
9.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
9.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
9.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
9.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
9.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
9.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
8.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
8.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
8.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
8.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
8.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
8.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
8.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
8.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
8.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
8.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
7.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
7.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
7.8
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
7.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
7.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
7.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
7.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
7.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
7.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
7.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
7.6
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
7.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
7.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
7.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
7.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
7.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
7.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
7.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
6.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
6.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
6.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
6.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
6.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
6.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
6.4
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
6.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
6.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
6.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
6.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
6.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
6.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
6.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
5.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
5.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
5.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
5.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
5.3
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
5.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
5.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
5.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
4.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
4.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
4.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
3.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NSMCE4A is potential prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.5
Number of samples
231
Samples
Sample
Description
TPM
DO50785
0 years, male, NA, stage:4, dead, 90 days
49.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
49.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
47.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
42.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
41.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
39.5
DO45145
0 years, male, NA, stage:3, dead, 60 days
37.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
36.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
36.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
35.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
35.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
34.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
34.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
34.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
33.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
32.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
32.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
32.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
32.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
32.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
31.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
31.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
31.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
31.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
31.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
30.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
30.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
30.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
30.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
30.4
DO45173
0 years, male, NA, stage:3, alive, 1170 days
30.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
29.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
29.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
29.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
29.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
29.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
29.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
29.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
28.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
28.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
28.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
28.1
DO45097
0 years, male, NA, stage:3, alive, 1620 days
27.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
27.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
27.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
27.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
27.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
27.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
26.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
26.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
26.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
26.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
25.9
DO50783
0 years, male, NA, stage:3, alive, 480 days
25.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
25.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
25.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
25.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
25.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
25.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
25.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
25.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
24.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
24.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
24.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
24.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
24.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
24.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
24.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
24.4
DO45281
0 years, male, NA, stage:4, alive, 750 days
24.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
24.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
24.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
24.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
24.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
24.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
23.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
23.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
23.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
23.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
23.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
23.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
23.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
23.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
23.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
23.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
23.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
23.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
23.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
23.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
23.2
DO45107
0 years, female, NA, stage:2, alive, 1710 days
23.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
22.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
22.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
22.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
22.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
22.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
22.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
22.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
22.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
22.3
DO50804
0 years, male, NA, stage:2, alive, 720 days
22.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
22.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
22.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
22.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
21.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
21.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
21.7
DO48706
0 years, male, NA, stage:2, alive, 870 days
21.6
DO45109
0 years, male, NA, stage:2, alive, 1590 days
21.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
21.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
21.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
21.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
21.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
21.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
21.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
21.0
DO23513
0 years, male, NA, stage:3, alive, 1200 days
20.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
20.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
20.7
DO45181
0 years, female, NA, stage:2, alive, 1200 days
20.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
20.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
20.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
20.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
19.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
19.8
DO45183
0 years, female, NA, stage:2, dead, 570 days
19.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
19.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
19.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
19.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
19.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
19.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
19.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
19.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
19.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
19.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
19.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
19.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
19.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
19.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
18.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
18.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
18.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
18.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
18.8
DO45241
0 years, male, NA, stage:1, alive, 1080 days
18.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
18.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
18.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
18.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
18.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
18.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
18.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
18.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
18.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
18.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
18.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
18.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
17.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
17.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
17.6
DO45191
0 years, female, NA, stage:2, alive, 1200 days
17.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
17.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
17.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
17.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
17.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
17.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
17.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
16.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
16.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
16.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
16.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
16.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
16.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
16.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
16.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
16.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
16.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
15.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
15.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
15.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
15.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
15.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
15.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
15.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
14.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
14.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
14.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
14.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
14.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
14.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
14.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
14.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
14.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
14.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
14.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
14.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
14.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
14.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
13.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
13.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
13.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
13.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
13.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
13.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
13.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
13.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
13.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
12.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
12.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
12.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
12.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
12.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
12.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
12.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
12.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
12.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
12.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
12.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
11.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
11.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
11.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
11.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
11.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
10.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
10.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
9.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
9.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
9.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
9.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
9.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
9.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
8.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
1043
Tumor
1.0
1046
Normal
1.0
641
Tumor
1.0
1031
Tumor
0.9
967
Tumor
0.8
331
Tumor
0.8
126
Normal
0.8
111
Normal
0.8
114
Normal
0.8
128
Normal
0.7
221
Tumor
0.7
975
Tumor
0.7
391
Tumor
0.7
881
Tumor
0.7
484
Normal
0.7
448
Normal
0.7
535
Tumor
0.6
965
Tumor
0.6
271
Tumor
0.6
743
Tumor
0.6
695
Tumor
0.6
387
Tumor
0.6
445
Tumor
0.6
523
Tumor
0.6
357
Tumor
0.6
127
Tumor
0.5
727
Tumor
0.5
921
Tumor
0.5
661
Tumor
0.5
858
Normal
0.5
481
Tumor
0.5
388
Normal
0.5
465
Tumor
0.5
487
Tumor
0.5
671
Tumor
0.5
777
Tumor
0.5
867
Tumor
0.5
211
Tumor
0.5
425
Tumor
0.5
1045
Tumor
0.5
124
Normal
0.5
313
Tumor
0.5
463
Tumor
0.5
123
Tumor
0.4
471
Tumor
0.4
857
Tumor
0.4
488
Normal
0.4
447
Tumor
0.4
385
Tumor
0.4
131
Tumor
0.4
517
Tumor
0.4
277
Tumor
0.4
112
Tumor
0.4
715
Tumor
0.4
698
Normal
0.4
737
Tumor
0.4
125
Tumor
0.4
982
Normal
0.4
113
Tumor
0.4
813
Tumor
0.4
536
Normal
0.4
666
Normal
0.4
814
Normal
0.4
553
Tumor
0.4
394
Normal
0.4
647
Tumor
0.4
187
Tumor
0.4
716
Normal
0.4
392
Normal
0.3
497
Tumor
0.3
912
Normal
0.3
963
Tumor
0.3
1044
Normal
0.3
483
Tumor
0.3
213
Tumor
0.3
436
Normal
0.3
498
Normal
0.3
396
Normal
0.3
534
Normal
0.3
361
Tumor
0.3
467
Tumor
0.3
232
Normal
0.3
852
Normal
0.3
786
Normal
0.3
1014
Normal
0.3
222
Normal
0.3
662
Normal
0.3
815
Tumor
0.3
958
Normal
0.3
231
Tumor
0.3
297
Tumor
0.3
482
Normal
0.3
435
Tumor
0.3
365
Tumor
0.3
724
Normal
0.3
341
Tumor
0.3
964
Normal
0.2
925
Tumor
0.2
432
Normal
0.2
922
Normal
0.2
546
Normal
0.2
926
Normal
0.2
545
Tumor
0.2
258
Normal
0.2
883
Tumor
0.2
746
Normal
0.2
145
Tumor
0.2
268
Normal
0.2
533
Tumor
0.2
538
Normal
0.2
863
Tumor
0.2
954
Normal
0.2
1016
Normal
0.2
188
Normal
0.2
494
Normal
0.2
413
Tumor
0.2
862
Normal
0.2
873
Tumor
0.2
824
Normal
0.2
742
Normal
0.2
196
Normal
0.2
342
Normal
0.2
283
Tumor
0.2
461
Tumor
0.2
938
Normal
0.2
422
Normal
0.2
721
Tumor
0.2
444
Normal
0.2
146
Normal
0.2
462
Normal
0.2
1032
Normal
0.2
1042
Normal
0.2
411
Tumor
0.2
383
Tumor
0.2
823
Tumor
0.2
664
Normal
0.2
142
Normal
0.2
443
Tumor
0.2
386
Normal
0.2
456
Normal
0.2
868
Normal
0.2
635
Tumor
0.2
272
Normal
0.1
455
Tumor
0.1
464
Normal
0.1
414
Normal
0.1
431
Tumor
0.1
148
Normal
0.1
744
Normal
0.1
472
Normal
0.1
616
Normal
0.1
524
Normal
0.1
516
Normal
0.1
723
Tumor
0.1
217
Tumor
0.1
937
Tumor
0.1
172
Normal
0.1
818
Normal
0.1
192
Normal
0.1
528
Normal
0.1
884
Normal
0.1
138
Normal
0.1
427
Tumor
0.1
191
Tumor
0.1
343
Tumor
0.1
924
Normal
0.1
515
Tumor
0.1
311
Tumor
0.1
195
Tumor
0.1
328
Normal
0.1
642
Normal
0.1
446
Normal
0.1
161
Tumor
0.1
493
Tumor
0.1
648
Normal
0.1
816
Normal
0.1
976
Normal
0.1
186
Normal
0.1
686
Normal
0.1
171
Tumor
0.1
874
Normal
0.1
214
Normal
0.1
473
Tumor
0.1
866
Normal
0.1
714
Normal
0.1
618
Normal
0.1
636
Normal
0.1
817
Tumor
0.1
514
Normal
0.1
218
Normal
0.1
477
Tumor
0.1
1021
Tumor
0.1
756
Normal
0.1
384
Normal
0.1
966
Normal
0.1
492
Normal
0.1
984
Normal
0.1
428
Normal
0.1
977
Tumor
0.1
141
Tumor
0.1
696
Normal
0.1
864
Normal
0.1
132
Normal
0.1
956
Normal
0.1
312
Normal
0.1
468
Normal
0.1
136
Normal
0.0
452
Normal
0.0
262
Normal
0.0
861
Tumor
0.0
968
Normal
0.0
537
Tumor
0.0
741
Tumor
0.0
685
Tumor
0.0
261
Tumor
0.0
426
Normal
0.0
1013
Tumor
0.0
526
Normal
0.0
314
Normal
0.0
1026
Normal
0.0
957
Tumor
0.0
1015
Tumor
0.0
278
Normal
0.0
722
Normal
0.0
433
Tumor
0.0
366
Normal
0.0
474
Normal
0.0
554
Normal
0.0
424
Normal
0.0
628
Normal
0.0
944
Normal
0.0
978
Normal
0.0
697
Tumor
0.0
923
Tumor
0.0
778
Normal
0.0
1028
Normal
0.0
185
Tumor
0.0
298
Normal
0.0
355
Tumor
0.0
362
Normal
0.0
364
Normal
0.0
466
Normal
0.0
882
Normal
0.0
563
Tumor
0.0
672
Normal
0.0
558
Normal
0.0
358
Normal
0.0
615
Tumor
0.0
1025
Tumor
0.0
257
Tumor
0.0
162
Normal
-0.1
916
Normal
-0.1
434
Normal
-0.1
376
Normal
-0.1
421
Tumor
-0.1
367
Tumor
-0.1
953
Tumor
-0.1
952
Normal
-0.1
286
Normal
-0.1
363
Tumor
-0.1
568
Normal
-0.1
412
Normal
-0.1
332
Normal
-0.1
713
Tumor
-0.1
572
Normal
-0.1
352
Normal
-0.1
478
Normal
-0.1
917
Tumor
-0.1
356
Normal
-0.1
951
Tumor
-0.1
224
Normal
-0.1
415
Tumor
-0.1
878
Normal
-0.1
913
Tumor
-0.1
354
Normal
-0.1
943
Tumor
-0.1
574
Normal
-0.1
1022
Normal
-0.1
327
Tumor
-0.2
267
Tumor
-0.2
571
Tumor
-0.2
728
Normal
-0.2
525
Tumor
-0.2
915
Tumor
-0.2
557
Tumor
-0.2
918
Normal
-0.2
423
Tumor
-0.2
564
Normal
-0.2
212
Normal
-0.2
914
Normal
-0.2
416
Normal
-0.2
1041
Tumor
-0.2
368
Normal
-0.2
567
Tumor
-0.2
135
Tumor
-0.2
865
Tumor
-0.2
663
Tumor
-0.2
627
Tumor
-0.2
911
Tumor
-0.2
573
Tumor
-0.2
491
Tumor
-0.3
284
Normal
-0.3
981
Tumor
-0.3
344
Normal
-0.3
755
Tumor
-0.3
617
Tumor
-0.3
147
Tumor
-0.3
223
Tumor
-0.3
851
Tumor
-0.3
785
Tumor
-0.3
451
Tumor
-0.3
738
Normal
-0.3
395
Tumor
-0.3
351
Tumor
-0.3
375
Tumor
-0.3
393
Tumor
-0.3
1027
Tumor
-0.3
955
Tumor
-0.4
228
Normal
-0.4
137
Tumor
-0.4
527
Tumor
-0.4
877
Tumor
-0.5
353
Tumor
-0.5
518
Normal
-0.6
665
Tumor
-0.6
983
Tumor
-0.6
745
Tumor
-0.7
513
Tumor
-0.7
227
Tumor
-0.8
285
Tumor
-1.2
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
