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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EIF3A is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
101.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
98.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
89.4
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
88.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
85.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
82.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
81.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
80.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
78.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
78.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
77.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
77.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
76.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
76.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
75.6
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
75.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
73.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
71.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
71.1
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
71.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
70.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
70.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
69.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
69.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
69.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
68.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
67.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
65.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
64.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
64.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
63.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
63.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
63.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
63.2
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
63.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
62.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
62.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
62.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
62.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
61.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
60.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
60.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
60.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
60.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
59.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
58.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
58.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
58.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
58.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
58.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
58.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
57.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
57.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
57.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
56.8
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
56.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
56.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
55.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
55.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
55.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
54.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
54.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
54.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
53.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
53.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
53.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
53.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
53.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
52.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
52.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
52.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
52.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
52.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
52.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
51.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
50.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
50.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
50.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
49.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
49.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
48.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
48.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
48.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
48.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
48.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
48.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
47.8
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
47.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
47.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
46.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
46.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
46.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
46.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
46.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
46.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
46.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
46.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
46.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
45.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
45.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
45.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
45.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
44.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
44.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
43.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
43.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
43.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
43.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
43.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
43.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
43.0
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
42.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
42.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
42.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
42.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
41.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
41.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
41.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
41.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
41.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
41.3
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
41.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
41.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
40.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
40.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
40.2
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
40.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
40.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
39.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
39.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
39.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
39.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
39.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
39.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
39.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
39.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
38.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
38.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
38.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
38.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
37.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
37.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
37.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
36.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
36.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
36.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
35.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
35.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
35.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
35.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
35.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
35.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
34.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
33.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
33.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
33.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
33.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
33.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
33.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
33.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
33.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
33.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
33.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
33.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
32.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
32.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
32.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
32.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
32.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
32.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
32.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
32.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
32.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
31.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
31.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
31.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
31.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
30.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
30.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
30.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
30.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
30.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
30.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
30.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
30.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
29.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
29.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
29.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
29.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
28.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
28.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
28.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
28.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
28.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
28.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
27.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
27.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
27.8
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
27.7
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
27.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
27.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
27.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
26.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
26.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
26.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
26.5
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
26.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
25.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
25.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
25.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
25.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
25.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
25.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
25.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
25.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
25.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
25.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
25.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
24.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
24.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
24.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
24.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
24.7
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
24.7
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
24.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
24.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
24.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
24.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
23.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
23.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
23.6
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
23.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
23.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
23.1
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
23.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
22.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
22.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
22.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
22.5
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
22.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
22.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
22.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
22.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
21.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
21.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
21.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
21.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
21.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
21.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
21.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
21.4
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
21.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
21.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
21.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
21.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
20.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
20.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
20.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
20.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
20.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
19.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
19.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
19.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
19.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
19.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
19.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
19.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
19.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
19.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
19.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
19.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
19.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
18.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
18.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
18.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
17.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
17.7
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
17.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
17.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
17.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
17.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
17.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
17.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
17.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
16.7
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
16.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
16.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
16.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
16.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
15.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
15.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
15.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
15.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
15.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
15.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
15.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
15.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
14.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
14.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
14.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
14.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
14.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
14.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
13.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
13.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
13.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
13.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
13.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
12.9
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
12.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
12.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
12.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
12.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
12.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
12.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
11.4
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
11.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
11.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
11.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
11.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
11.0
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
10.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
10.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
10.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
10.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
10.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
10.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
10.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
10.2
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
10.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
9.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
9.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
9.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
9.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
9.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
9.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
9.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
8.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
8.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
8.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
8.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
7.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
7.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
7.5
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
7.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
7.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
7.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
7.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
6.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
6.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
6.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
6.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
6.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
5.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
5.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
5.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
4.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
4.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
3.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EIF3A is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.2
Number of samples
231
Samples
Sample
Description
TPM
DO48682
0 years, female, NA, stage:3, dead, 120 days
112.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
107.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
98.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
97.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
85.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
83.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
81.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
81.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
79.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
79.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
79.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
78.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
77.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
76.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
75.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
74.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
74.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
73.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
73.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
73.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
71.7
DO45239
0 years, male, NA, stage:2, alive, 870 days
70.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
69.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
69.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
69.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
68.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
67.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
67.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
66.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
66.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
65.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
64.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
64.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
63.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
63.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
63.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
62.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
62.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
61.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
61.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
60.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
60.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
60.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
59.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
59.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
59.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
58.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
57.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
57.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
57.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
56.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
56.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
56.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
56.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
55.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
55.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
55.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
55.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
54.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
54.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
54.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
54.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
53.9
DO45127
0 years, male, NA, stage:3, dead, 420 days
53.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
53.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
52.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
52.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
52.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
51.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
51.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
50.9
DO45175
0 years, male, NA, stage:2, alive, 1140 days
50.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
50.4
DO48677
0 years, male, NA, stage:3, alive, 1140 days
50.2
DO45277
0 years, male, NA, stage:3, alive, 600 days
49.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
49.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
49.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
49.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
49.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
49.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
49.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
48.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
48.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
47.8
DO45092
0 years, male, NA, stage:4, dead, 1200 days
47.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
46.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
46.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
45.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
45.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
45.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
45.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
45.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
45.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
44.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
43.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
43.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
42.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
42.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
42.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
42.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
41.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
41.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
40.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
40.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
40.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
40.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
40.4
DO45301
0 years, male, NA, stage:2, dead, 1440 days
40.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
39.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
39.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
38.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
38.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
38.7
DO45307
0 years, female, NA, stage:4, dead, 240 days
38.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
38.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
38.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
38.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
38.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
38.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
38.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
38.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
37.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
37.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
37.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
36.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
36.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
36.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
36.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
36.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
36.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
35.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
35.6
DO45153
0 years, female, NA, stage:2, alive, 1380 days
35.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
34.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
34.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
34.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
34.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
34.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
34.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
34.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
34.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
34.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
33.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
33.9
DO45103
0 years, male, NA, stage:3, alive, 450 days
33.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
33.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
33.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
33.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
33.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
33.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
33.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
33.1
DO50844
0 years, male, NA, stage:4, alive, 300 days
32.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
32.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
32.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
32.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
32.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
32.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
31.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
31.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
31.6
DO23549
0 years, male, NA, stage:3, alive, 990 days
31.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
30.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
30.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
30.1
DO48716
0 years, male, NA, stage:2, alive, 720 days
29.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
29.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
29.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
29.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
28.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
28.9
DO23517
0 years, male, NA, stage:2, alive, 1200 days
28.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
28.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
28.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
28.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
27.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
27.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
27.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
26.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
26.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
26.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
26.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
25.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
24.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
24.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
24.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
23.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
23.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
23.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
23.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
22.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
22.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
22.3
DO48721
0 years, female, NA, stage:1, alive, 900 days
22.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
22.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
22.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
21.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
21.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
21.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
21.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
21.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
20.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
20.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
20.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
20.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
19.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
19.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
18.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
18.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
17.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
17.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
16.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
16.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
16.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
15.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
15.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
14.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
14.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
14.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
13.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
13.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
13.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
12.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
12.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
12.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
11.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
11.6
DO45149
0 years, female, NA, stage:2, alive, 1260 days
11.2
DO45107
0 years, female, NA, stage:2, alive, 1710 days
10.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
8.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
4.9
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
685
Tumor
0.6
937
Tumor
0.5
535
Tumor
0.5
395
Tumor
0.5
557
Tumor
0.4
285
Tumor
0.4
537
Tumor
0.4
331
Tumor
0.4
341
Tumor
0.4
983
Tumor
0.4
967
Tumor
0.4
965
Tumor
0.4
921
Tumor
0.4
1025
Tumor
0.4
223
Tumor
0.4
533
Tumor
0.4
815
Tumor
0.4
523
Tumor
0.4
367
Tumor
0.4
443
Tumor
0.4
865
Tumor
0.4
951
Tumor
0.4
327
Tumor
0.4
1031
Tumor
0.4
267
Tumor
0.4
1021
Tumor
0.4
661
Tumor
0.4
525
Tumor
0.3
545
Tumor
0.3
695
Tumor
0.3
553
Tumor
0.3
497
Tumor
0.3
131
Tumor
0.3
567
Tumor
0.3
421
Tumor
0.3
955
Tumor
0.3
641
Tumor
0.3
221
Tumor
0.3
851
Tumor
0.3
524
Normal
0.3
953
Tumor
0.3
271
Tumor
0.3
743
Tumor
0.3
231
Tumor
0.3
297
Tumor
0.3
355
Tumor
0.3
1027
Tumor
0.3
517
Tumor
0.3
415
Tumor
0.3
471
Tumor
0.3
147
Tumor
0.2
427
Tumor
0.2
113
Tumor
0.2
493
Tumor
0.2
715
Tumor
0.2
925
Tumor
0.2
311
Tumor
0.2
145
Tumor
0.2
413
Tumor
0.2
351
Tumor
0.2
957
Tumor
0.2
135
Tumor
0.2
257
Tumor
0.2
745
Tumor
0.2
727
Tumor
0.2
724
Normal
0.2
451
Tumor
0.2
123
Tumor
0.2
353
Tumor
0.2
536
Normal
0.2
473
Tumor
0.2
978
Normal
0.2
127
Tumor
0.2
514
Normal
0.2
467
Tumor
0.2
211
Tumor
0.2
981
Tumor
0.2
125
Tumor
0.2
1043
Tumor
0.2
187
Tumor
0.2
617
Tumor
0.2
823
Tumor
0.2
363
Tumor
0.1
515
Tumor
0.1
385
Tumor
0.1
484
Normal
0.1
136
Normal
0.1
455
Tumor
0.1
944
Normal
0.1
494
Normal
0.1
391
Tumor
0.1
923
Tumor
0.1
431
Tumor
0.1
817
Tumor
0.1
518
Normal
0.1
755
Tumor
0.1
478
Normal
0.1
697
Tumor
0.1
926
Normal
0.1
922
Normal
0.1
261
Tumor
0.1
1014
Normal
0.1
356
Normal
0.1
918
Normal
0.1
663
Tumor
0.1
873
Tumor
0.1
191
Tumor
0.1
858
Normal
0.1
1041
Tumor
0.1
563
Tumor
0.1
412
Normal
0.1
728
Normal
0.1
964
Normal
0.1
513
Tumor
0.1
756
Normal
0.1
671
Tumor
0.1
938
Normal
0.1
411
Tumor
0.1
482
Normal
0.1
277
Tumor
0.1
217
Tumor
0.1
142
Normal
0.1
984
Normal
0.1
448
Normal
0.1
1032
Normal
0.1
488
Normal
0.1
966
Normal
0.1
534
Normal
0.1
696
Normal
0.1
516
Normal
0.1
558
Normal
0.1
492
Normal
0.1
958
Normal
0.1
472
Normal
0.1
975
Tumor
0.1
526
Normal
0.1
1026
Normal
0.1
212
Normal
0.1
963
Tumor
0.1
852
Normal
0.1
883
Tumor
0.1
463
Tumor
0.1
528
Normal
0.1
721
Tumor
0.1
1046
Normal
0.1
628
Normal
0.1
284
Normal
0.1
546
Normal
0.1
777
Tumor
0.1
568
Normal
0.1
824
Normal
0.1
952
Normal
0.1
312
Normal
0.1
943
Tumor
0.1
481
Tumor
0.1
916
Normal
0.1
416
Normal
0.1
171
Tumor
0.1
912
Normal
0.1
1044
Normal
0.1
554
Normal
0.1
393
Tumor
0.1
313
Tumor
0.1
714
Normal
0.1
982
Normal
0.1
286
Normal
0.1
487
Tumor
0.1
672
Normal
0.1
466
Normal
0.0
857
Tumor
0.0
527
Tumor
0.0
572
Normal
0.0
723
Tumor
0.0
228
Normal
0.0
425
Tumor
0.0
571
Tumor
0.0
435
Tumor
0.0
387
Tumor
0.0
917
Tumor
0.0
954
Normal
0.0
185
Tumor
0.0
647
Tumor
0.0
447
Tumor
0.0
1028
Normal
0.0
538
Normal
0.0
881
Tumor
0.0
227
Tumor
0.0
665
Tumor
0.0
968
Normal
0.0
124
Normal
0.0
778
Normal
0.0
882
Normal
0.0
213
Tumor
0.0
1016
Normal
0.0
866
Normal
0.0
474
Normal
0.0
573
Tumor
0.0
352
Normal
0.0
884
Normal
0.0
698
Normal
0.0
818
Normal
0.0
1022
Normal
0.0
864
Normal
0.0
737
Tumor
0.0
141
Tumor
0.0
376
Normal
0.0
422
Normal
0.0
956
Normal
0.0
462
Normal
0.0
114
Normal
0.0
262
Normal
0.0
364
Normal
0.0
232
Normal
0.0
786
Normal
0.0
224
Normal
0.0
477
Tumor
0.0
195
Tumor
0.0
161
Tumor
0.0
128
Normal
0.0
268
Normal
0.0
138
Normal
0.0
498
Normal
0.0
1013
Tumor
0.0
218
Normal
0.0
278
Normal
0.0
272
Normal
0.0
298
Normal
0.0
196
Normal
0.0
636
Normal
0.0
468
Normal
0.0
112
Tumor
0.0
436
Normal
0.0
1042
Normal
0.0
716
Normal
0.0
392
Normal
0.0
146
Normal
0.0
746
Normal
0.0
332
Normal
0.0
361
Tumor
0.0
132
Normal
0.0
814
Normal
0.0
414
Normal
0.0
483
Tumor
0.0
862
Normal
0.0
446
Normal
0.0
222
Normal
0.0
913
Tumor
0.0
738
Normal
0.0
362
Normal
0.0
976
Normal
0.0
433
Tumor
0.0
648
Normal
0.0
434
Normal
0.0
188
Normal
0.0
1015
Tumor
0.0
328
Normal
0.0
861
Tumor
0.0
686
Normal
0.0
258
Normal
0.0
564
Normal
0.0
126
Normal
0.0
396
Normal
0.0
394
Normal
0.0
662
Normal
0.0
357
Tumor
0.0
878
Normal
0.0
283
Tumor
0.0
384
Normal
0.0
977
Tumor
0.0
314
Normal
0.0
465
Tumor
0.0
664
Normal
0.0
615
Tumor
0.0
375
Tumor
0.0
464
Normal
0.0
452
Normal
0.0
722
Normal
0.0
148
Normal
0.0
386
Normal
0.0
214
Normal
0.0
111
Normal
0.0
742
Normal
-0.1
358
Normal
-0.1
816
Normal
-0.1
444
Normal
-0.1
616
Normal
-0.1
877
Tumor
-0.1
785
Tumor
-0.1
924
Normal
-0.1
186
Normal
-0.1
426
Normal
-0.1
618
Normal
-0.1
635
Tumor
-0.1
915
Tumor
-0.1
162
Normal
-0.1
574
Normal
-0.1
172
Normal
-0.1
432
Normal
-0.1
713
Tumor
-0.1
424
Normal
-0.1
342
Normal
-0.1
868
Normal
-0.1
666
Normal
-0.1
368
Normal
-0.1
428
Normal
-0.1
343
Tumor
-0.1
388
Normal
-0.1
344
Normal
-0.1
456
Normal
-0.1
491
Tumor
-0.1
874
Normal
-0.1
137
Tumor
-0.1
354
Normal
-0.1
642
Normal
-0.1
192
Normal
-0.1
914
Normal
-0.1
383
Tumor
-0.1
366
Normal
-0.1
813
Tumor
-0.2
461
Tumor
-0.2
1045
Tumor
-0.2
744
Normal
-0.2
867
Tumor
-0.2
365
Tumor
-0.2
627
Tumor
-0.2
423
Tumor
-0.3
741
Tumor
-0.3
911
Tumor
-0.3
863
Tumor
-0.3
445
Tumor
-0.4
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
