HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:96.0 nTPM
HPA Brain:50.9 nTPM
GTEx:96.0 nTPM
FANTOM5:60.8 Scaled Tags Per Million
Pig:25.3 nTPM
Mouse:163.5 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018121Antibody CAB002486
Glial cells LowMedium
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 50.9
Sample id Sample description nTPM
Hippocampus
nTPM: 47.0
1898 Male, age 80, left hemisphere 56.8
1855 Male, age 76, left hemisphere 55.9
2621 Female, age 67, right hemisphere 46.4
1911 Female, age 85, right hemisphere 42.2
2529 Female, age 94, left hemisphere 41.4
2148 Female, age 91, left hemisphere 39.3
Dentate gyrus
nTPM: 43.8
2530 Female, age 94, left hemisphere 68.2
2010 Male, age 76, both hemispheres 48.6
1927 Female, age 91, both hemispheres 42.5
2531 Female, age 67, both hemispheres 40.6
2246 Female, age 85, both hemispheres 35.8
2528 Male, age 74, both hemispheres 27.3
Entorhinal gyrus
nTPM: 44.1
2686 Male, age 75, right hemisphere 53.1
1938 Female, age 85, left hemisphere 48.2
2117 Female, age 91, right hemisphere 45.5
2764 Male, age 80, right hemisphere 42.9
1787 Male, age 76, left hemisphere 39.4
2613 Female, age 94, left hemisphere 35.4
Hippocampus, CA1
nTPM: 46.9
1873 Female, age 85, both hemispheres 54.2
2749 Male, age 80, left hemisphere 47.7
2082 Female, age 91, right hemisphere 46.9
2045 Male, age 76, both hemispheres 43.6
2527 Male, age 74, both hemispheres 41.9
Hippocampus, CA2
nTPM: 50.9
1963 Male, age 80, left hemisphere 60.1
1892 Male, age 76, both hemispheres 55.5
2437 Female, age 94, left hemisphere 54.0
2113 Female, age 91, right hemisphere 48.2
1940 Female, age 85, left hemisphere 46.5
2249 Male, age 74, both hemispheres 40.9
Hippocampus, CA3
nTPM: 47.5
1867 Male, age 76, both hemispheres 57.6
2436 Male, age 74, both hemispheres 49.9
2861 Female, age 67, both hemispheres 48.0
1891 Female, age 85, both hemispheres 46.7
2137 Male, age 80, left hemisphere 41.3
2620 Female, age 94, left hemisphere 41.3
Parahippocampal cortex
nTPM: 43.1
2622 Female, age 67, right hemisphere 48.8
2018 Male, age 76, both hemispheres 45.8
2245 Female, age 91, both hemispheres 44.9
2250 Female, age 67, right hemisphere 44.4
1933 Female, age 85, both hemispheres 44.1
1850 Male, age 80, both hemispheres 43.8
2693 Female, age 94, both hemispheres 43.7
2692 Male, age 74, both hemispheres 41.5
2532 Female, age 72, left hemisphere 37.0
1990 Female, age 91, right hemisphere 36.9
Perirhinal gyrus
nTPM: 42.0
1847 Female, age 91, left hemisphere 47.7
1794 Male, age 80, right hemisphere 46.3
2848 Male, age 76, right hemisphere 41.3
1841 Female, age 85, right hemisphere 40.3
2521 Female, age 94, right hemisphere 34.1
Subiculum
nTPM: 46.7
1901 Male, age 80, both hemispheres 64.6
2042 Male, age 76, both hemispheres 52.6
2438 Female, age 94, left hemisphere 48.2
1977 Female, age 85, both hemispheres 39.2
2619 Male, age 74, both hemispheres 38.8
2729 Female, age 91, right hemisphere 36.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 96.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 96.0
Samples: 197

Max nTPM: 227.9
Min nTPM: 35.0
Std nTPM: 28.4
Median nTPM: 90.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 227.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 208.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 187.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 187.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 183.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 171.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 164.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 161.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 161.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 156.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 149.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 60.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.8
FF:10169-103B7 60 years, female 73.7
FF:10153-102I9 76 years, female 47.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 25.3
Pig sample Sample description nTPM
Subiculum
nTPM: 24.7
Samples: 4

Max nTPM: 32.0
Min nTPM: 21.9
Sample A Female 32.0
Sample B Female 21.9
Sample C Male 22.8
Sample D Male 22.1
Dorsal hippocampus
nTPM: 22.1
Samples: 4

Max nTPM: 25.5
Min nTPM: 20.6
Sample A Female 25.5
Sample B Female 20.6
Sample C Male 21.5
Sample D Male 20.7
Entorhinal cortex
nTPM: 25.4
Samples: 4

Max nTPM: 29.5
Min nTPM: 19.4
Sample A Female 25.6
Sample B Female 29.5
Sample C Male 26.9
Sample D Male 19.4
Ventral hippocampus
nTPM: 20.9
Samples: 4

Max nTPM: 24.1
Min nTPM: 19.0
Sample A Female 20.2
Sample B Female 20.1
Sample C Male 24.1
Sample D Male 19.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 163.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 163.6
Samples: 4

Max nTPM: 171.9
Min nTPM: 152.1
Sample A Male 159.9
Sample B Male 152.1
Sample C Female 171.9
Sample D Female 170.3
Hippocampal formation
nTPM: 153.8
Samples: 4

Max nTPM: 168.1
Min nTPM: 148.1
Sample A Male 168.1
Sample B Male 149.0
Sample C Female 149.8
Sample D Female 148.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
75043147 Antisense, RP_060220_02_G08, Mouse strain C57BL/6J (56 days, male) 3.2
69134523 Antisense, RP_050321_03_A11, Mouse strain C57BL/6J (56 days, male) 1.4

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