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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
0.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
9.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
9.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
0.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
0.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
0.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
0.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CA9 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
180.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
714.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
658.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
596.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
594.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
559.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
556.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
463.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
463.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
450.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
450.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
440.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
439.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
436.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
431.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
427.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
424.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
421.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
418.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
411.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
404.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
398.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
396.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
396.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
395.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
393.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
388.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
388.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
387.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
385.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
382.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
382.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
374.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
374.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
368.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
364.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
361.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
357.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
356.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
356.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
356.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
348.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
347.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
346.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
346.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
344.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
342.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
342.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
335.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
333.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
323.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
321.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
321.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
319.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
319.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
318.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
317.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
317.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
307.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
306.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
305.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
305.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
299.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
298.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
297.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
296.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
294.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
294.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
292.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
292.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
292.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
291.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
290.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
290.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
287.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
287.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
284.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
283.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
283.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
282.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
279.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
279.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
278.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
277.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
277.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
277.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
276.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
275.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
275.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
273.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
272.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
272.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
271.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
270.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
270.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
269.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
269.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
269.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
268.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
268.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
267.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
267.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
266.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
266.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
265.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
264.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
264.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
264.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
262.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
261.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
260.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
260.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
259.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
259.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
259.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
256.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
256.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
256.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
256.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
254.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
254.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
252.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
252.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
249.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
249.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
249.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
247.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
247.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
245.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
244.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
244.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
243.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
243.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
242.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
242.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
241.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
240.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
239.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
239.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
239.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
237.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
237.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
237.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
236.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
236.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
235.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
234.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
234.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
233.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
230.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
230.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
230.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
230.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
229.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
229.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
229.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
228.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
228.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
227.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
225.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
224.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
224.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
224.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
224.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
223.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
222.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
221.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
220.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
219.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
219.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
218.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
218.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
217.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
217.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
217.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
215.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
215.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
215.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
214.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
214.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
213.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
213.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
213.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
213.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
212.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
211.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
211.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
211.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
211.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
210.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
210.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
210.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
210.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
207.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
207.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
207.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
207.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
206.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
206.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
206.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
205.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
205.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
204.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
202.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
202.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
202.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
201.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
199.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
199.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
199.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
198.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
198.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
198.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
197.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
196.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
195.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
195.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
195.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
194.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
193.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
192.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
191.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
191.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
190.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
190.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
190.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
190.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
190.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
189.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
189.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
188.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
187.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
187.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
187.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
186.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
185.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
184.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
184.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
184.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
183.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
183.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
182.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
182.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
181.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
180.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
180.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
178.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
177.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
177.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
176.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
176.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
176.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
176.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
176.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
175.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
174.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
174.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
173.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
173.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
171.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
171.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
170.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
170.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
170.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
169.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
169.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
169.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
169.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
169.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
167.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
167.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
167.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
165.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
165.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
165.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
163.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
162.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
162.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
162.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
161.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
161.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
161.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
160.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
160.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
160.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
160.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
159.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
159.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
158.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
158.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
156.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
155.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
155.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
155.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
155.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
153.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
153.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
153.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
153.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
152.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
152.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
151.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
150.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
150.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
149.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
149.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
149.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
149.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
149.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
148.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
148.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
147.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
146.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
146.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
145.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
145.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
145.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
145.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
145.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
144.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
144.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
143.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
143.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
142.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
142.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
139.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
138.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
138.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
138.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
137.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
137.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
137.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
135.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
134.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
133.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
132.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
131.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
130.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
130.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
129.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
129.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
128.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
128.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
128.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
127.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
127.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
126.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
126.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
126.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
125.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
123.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
123.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
122.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
122.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
122.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
121.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
120.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
120.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
120.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
119.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
119.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
119.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
117.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
117.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
117.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
115.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
115.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
115.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
114.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
114.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
113.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
113.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
112.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
110.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
110.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
110.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
109.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
108.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
108.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
108.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
107.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
106.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
106.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
105.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
105.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
105.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
105.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
104.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
104.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
104.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
101.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
101.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
101.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
101.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
100.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
100.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
100.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
99.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
99.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
98.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
98.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
97.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
97.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
96.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
96.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
95.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
95.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
94.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
93.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
92.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
92.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
90.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
90.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
90.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
89.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
89.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
88.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
88.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
87.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
86.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
85.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
84.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
84.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
84.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
83.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
83.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
80.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
79.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
77.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
74.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
73.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
73.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
72.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
71.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
71.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
71.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
70.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
70.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
69.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
69.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
68.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
68.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
67.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
67.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
67.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
67.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
66.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
64.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
64.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
63.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
62.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
62.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
61.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
60.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
60.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
58.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
57.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
57.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
57.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
56.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
54.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
54.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
52.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
50.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
49.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
47.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
43.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
43.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
41.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
40.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
39.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
37.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
33.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
32.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
31.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
30.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
28.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
28.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
28.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
28.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
27.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
24.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
22.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
21.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
19.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
18.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
15.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
14.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
14.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
9.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
9.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
8.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
8.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
5.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
4.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
3.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
2.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
1.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
1.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
1.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
0.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
0.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
0.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
0.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
0.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
0.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
0.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
0.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
0.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
0.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
0.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
0.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CA9 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
186.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
545.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
464.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
434.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
398.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
368.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
365.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
352.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
347.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
340.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
335.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
335.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
328.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
326.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
325.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
323.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
296.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
296.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
284.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
278.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
257.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
254.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
246.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
243.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
241.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
241.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
239.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
235.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
235.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
233.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
232.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
231.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
229.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
225.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
223.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
220.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
220.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
216.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
212.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
212.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
210.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
207.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
201.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
200.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
198.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
193.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
193.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
184.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
184.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
183.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
182.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
175.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
173.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
172.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
169.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
168.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
162.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
161.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
160.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
157.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
153.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
152.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
143.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
141.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
140.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
138.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
138.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
131.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
128.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
126.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
125.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
123.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
123.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
119.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
117.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
117.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
110.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
101.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
95.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
92.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
88.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
86.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
82.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
77.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
76.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
74.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
70.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
69.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
63.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
61.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
56.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
56.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
56.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
55.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
35.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
22.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
15.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
9.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
0.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
0.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CA9 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
508.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
419.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
343.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
191.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
169.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
147.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
113.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
99.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
92.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
77.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
68.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
64.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
60.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
59.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
57.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
50.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
45.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
43.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
43.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
36.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
35.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
35.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
31.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
30.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
29.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
26.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
26.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
24.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
24.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
23.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
22.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
22.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
20.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
20.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
19.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
18.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
16.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
16.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
14.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
14.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
13.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
12.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
12.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
11.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
10.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
10.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
10.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
10.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
9.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
9.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
9.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
9.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
9.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
8.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
8.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
7.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
7.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
7.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
7.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
7.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
7.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
6.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
6.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
6.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
6.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
5.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
5.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
5.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
5.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
5.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
5.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
5.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
4.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
4.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
4.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
4.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
4.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
4.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
4.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
4.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
4.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
3.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
3.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
3.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
3.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
3.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
3.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
3.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
2.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
2.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
2.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
2.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
2.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
2.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
2.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
2.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
2.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
2.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
2.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
2.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
2.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
2.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
2.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
2.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
2.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
2.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
2.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
1.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
1.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
1.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
1.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
1.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
1.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
1.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
1.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
1.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
1.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
1.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
1.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
1.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
1.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
1.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
1.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
1.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
1.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
1.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
1.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
1.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
1.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
1.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
1.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
1.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
1.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
1.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
1.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
1.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
1.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
1.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
1.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
1.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
1.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
1.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
0.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
0.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
0.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
0.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
0.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
0.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
0.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
0.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
0.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
0.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
0.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
0.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
0.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
0.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
0.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
0.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
0.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
0.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
0.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
0.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
0.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
0.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
0.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
0.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
0.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
0.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
0.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
0.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
0.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
0.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
0.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
0.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
0.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
0.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
0.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
0.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
0.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
0.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
0.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
0.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
0.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
0.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
0.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
0.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
0.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
0.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
0.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
0.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
0.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
0.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
0.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
0.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
0.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
0.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
0.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
0.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
0.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
0.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
0.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
0.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
0.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
0.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
0.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
0.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
0.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
0.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
0.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
0.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
0.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
0.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
0.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
0.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
0.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
0.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
0.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
0.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
0.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
0.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
0.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
0.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
0.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
0.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
0.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
0.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0006440003
Tumor
2.5
CPT0009000003
Tumor
2.3
CPT0069000003
Tumor
2.1
CPT0089020003
Tumor
2.0
CPT0006900003
Tumor
1.9
CPT0014370004
Tumor
1.9
CPT0006630003
Tumor
1.8
CPT0025350003
Tumor
1.7
CPT0089460004
Tumor
1.6
CPT0000640003
Tumor
1.6
CPT0001340003
Tumor
1.6
CPT0078930003
Tumor
1.6
CPT0087040003
Tumor
1.5
CPT0088760003
Tumor
1.5
CPT0079480003
Tumor
1.4
CPT0088900003
Tumor
1.4
CPT0014450004
Tumor
1.3
CPT0086030003
Tumor
1.3
CPT0000780007
Tumor
1.2
CPT0025580004
Tumor
1.2
CPT0065930003
Tumor
1.2
CPT0088630003
Tumor
1.2
CPT0077490003
Tumor
1.1
CPT0026410003
Tumor
1.1
CPT0076330003
Tumor
1.1
CPT0025230003
Tumor
1.1
CPT0077110003
Tumor
1.1
CPT0010160003
Tumor
1.0
CPT0025050003
Tumor
1.0
CPT0077310003
Tumor
1.0
CPT0019130003
Tumor
1.0
CPT0092730003
Tumor
1.0
CPT0085670003
Tumor
1.0
CPT0071150004
Tumor
1.0
CPT0075720003
Tumor
0.9
CPT0079380003
Tumor
0.9
CPT0079270003
Tumor
0.8
CPT0092290003
Tumor
0.8
CPT0092790003
Tumor
0.8
CPT0025110003
Tumor
0.8
CPT0066470004
Tumor
0.7
CPT0012080003
Tumor
0.7
CPT0001260009
Tumor
0.7
CPT0084560003
Tumor
0.7
CPT0063320003
Tumor
0.7
CPT0063630003
Tumor
0.7
CPT0009060003
Tumor
0.7
CPT0019990003
Tumor
0.7
CPT0086950003
Tumor
0.7
CPT0092160003
Tumor
0.5
CPT0086360003
Tumor
0.5
CPT0065430003
Tumor
0.5
CPT0065750003
Tumor
0.5
CPT0001500009
Tumor
0.5
CPT0014160003
Tumor
0.5
CPT0088690003
Tumor
0.5
CPT0012370003
Tumor
0.5
CPT0066480003
Tumor
0.4
CPT0078830003
Tumor
0.4
CPT0081600003
Tumor
0.4
CPT0064370003
Tumor
0.4
CPT0078990003
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0000870016
Tumor
0.4
CPT0024670003
Tumor
0.4
CPT0025290003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0086870003
Tumor
0.3
CPT0015910003
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0021240003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0088480003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0078510003
Tumor
0.0
CPT0081880003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0012670003
Tumor
-0.1
CPT0015730003
Tumor
-0.1
CPT0069160003
Tumor
-0.1
CPT0025170003
Tumor
-0.2
CPT0007320003
Tumor
-0.2
CPT0012280003
Tumor
-0.4
CPT0075130003
Tumor
-0.4
CPT0007860003
Tumor
-0.4
CPT0023350003
Tumor
-0.5
CPT0079510001
Normal
-0.5
CPT0065870003
Tumor
-0.6
CPT0025880003
Tumor
-0.6
CPT0020120003
Tumor
-0.7
CPT0088920001
Normal
-0.7
CPT0079410003
Tumor
-0.7
CPT0026420001
Normal
-0.7
CPT0078530001
Normal
-0.8
CPT0014470001
Normal
-0.8
CPT0077320001
Normal
-0.8
CPT0011410003
Tumor
-0.9
CPT0088970003
Tumor
-0.9
CPT0075560003
Tumor
-0.9
CPT0066430001
Normal
-1.0
CPT0012550003
Tumor
-1.0
CPT0088570001
Normal
-1.0
CPT0079300001
Normal
-1.1
CPT0088780001
Normal
-1.1
CPT0089480003
Normal
-1.1
CPT0077140001
Normal
-1.1
CPT0017850003
Tumor
-1.1
CPT0019160001
Normal
-1.1
CPT0001270001
Normal
-1.2
CPT0020020001
Normal
-1.2
CPT0014350001
Normal
-1.2
CPT0069010001
Normal
-1.2
CPT0069190001
Normal
-1.2
CPT0076350001
Normal
-1.2
CPT0006530001
Normal
-1.2
CPT0081620001
Normal
-1.3
CPT0017410003
Tumor
-1.3
CPT0007870001
Normal
-1.3
CPT0089040001
Normal
-1.3
CPT0020130001
Normal
-1.3
CPT0010170001
Normal
-1.3
CPT0007470001
Normal
-1.3
CPT0000660001
Normal
-1.4
CPT0002370001
Normal
-1.4
CPT0084590001
Normal
-1.4
CPT0088550004
Tumor
-1.4
CPT0088640003
Normal
-1.5
CPT0006950001
Normal
-1.5
CPT0086970003
Normal
-1.5
CPT0012570003
Normal
-1.5
CPT0064400001
Normal
-1.5
CPT0012920003
Normal
-1.6
CPT0078940001
Normal
-1.6
CPT0000890001
Normal
-1.6
CPT0012770003
Normal
-1.6
CPT0010120001
Normal
-1.6
CPT0078800003
Tumor
-1.6
CPT0092190003
Normal
-1.6
CPT0088710001
Normal
-1.6
CPT0009080003
Normal
-1.6
CPT0025610001
Normal
-1.7
CPT0079180003
Tumor
-1.7
CPT0024680001
Normal
-1.7
CPT0075170001
Normal
-1.7
CPT0086830003
Normal
-1.7
CPT0079000001
Normal
-1.7
CPT0025920001
Normal
-1.8
CPT0001190001
Normal
-1.8
CPT0088500001
Normal
-1.9
CPT0001180009
Tumor
-1.9
CPT0066520001
Normal
-1.9
CPT0009020003
Normal
-1.9
CPT0017450001
Normal
-1.9
CPT0086370003
Normal
-1.9
CPT0002270011
Tumor
-1.9
CPT0013790003
Normal
-2.0
CPT0087050003
Normal
-2.0
CPT0001550001
Normal
-2.0
CPT0025060001
Normal
-2.1
CPT0014130001
Normal
-2.1
CPT0086890003
Normal
-2.1
CPT0023360001
Normal
-2.2
CPT0063330001
Normal
-2.2
CPT0063640001
Normal
-2.2
CPT0001230001
Normal
-2.3
CPT0065450001
Normal
-2.3
CPT0092310003
Normal
-2.3
CPT0092800003
Normal
-2.3
CPT0000790001
Normal
-2.3
CPT0078670001
Normal
-2.4
CPT0012090003
Normal
-2.4
CPT0079430001
Normal
-2.4
CPT0077500001
Normal
-2.4
CPT0001350001
Normal
-2.5
CPT0092740003
Normal
-2.5
CPT0012180003
Tumor
-2.6
CPT0001510001
Normal
-2.7
CPT0078840001
Normal
-2.7
CPT0078660003
Tumor
-2.7
CPT0023710001
Normal
-2.8
CPT0018250001
Normal
-2.8
CPT0082010001
Normal
-2.8
CPT0012290003
Normal
-2.9
CPT0006730001
Normal
-2.9
CPT0012640003
Normal
-2.9
CPT0065820001
Normal
-3.0
CPT0075570001
Normal
-3.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
