HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:27.1 nTPM
HPA Brain:39.3 nTPM
GTEx:27.1 nTPM
FANTOM5:23.9 Scaled Tags Per Million
Pig:14.1 nTPM
Mouse:26.1 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045865
Glial cells Low
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 39.3
Sample id Sample description nTPM
Hippocampus
nTPM: 33.6
1898 Male, age 80, left hemisphere 35.4
2148 Female, age 91, left hemisphere 33.9
2529 Female, age 94, left hemisphere 33.9
2621 Female, age 67, right hemisphere 33.7
1855 Male, age 76, left hemisphere 33.1
1911 Female, age 85, right hemisphere 31.8
Dentate gyrus
nTPM: 34.1
2531 Female, age 67, both hemispheres 37.2
2530 Female, age 94, left hemisphere 36.2
2528 Male, age 74, both hemispheres 34.6
2246 Female, age 85, both hemispheres 33.0
2010 Male, age 76, both hemispheres 32.7
1927 Female, age 91, both hemispheres 31.0
Entorhinal gyrus
nTPM: 39.3
2613 Female, age 94, left hemisphere 46.3
2764 Male, age 80, right hemisphere 45.5
2686 Male, age 75, right hemisphere 40.4
1938 Female, age 85, left hemisphere 35.8
1787 Male, age 76, left hemisphere 35.4
2117 Female, age 91, right hemisphere 32.4
Hippocampus, CA1
nTPM: 31.8
2749 Male, age 80, left hemisphere 35.7
2082 Female, age 91, right hemisphere 33.0
1873 Female, age 85, both hemispheres 32.1
2527 Male, age 74, both hemispheres 31.8
2045 Male, age 76, both hemispheres 26.1
Hippocampus, CA2
nTPM: 33.9
1963 Male, age 80, left hemisphere 41.1
2437 Female, age 94, left hemisphere 36.2
1940 Female, age 85, left hemisphere 33.7
2113 Female, age 91, right hemisphere 33.6
1892 Male, age 76, both hemispheres 31.2
2249 Male, age 74, both hemispheres 27.9
Hippocampus, CA3
nTPM: 34.0
2861 Female, age 67, both hemispheres 43.8
2620 Female, age 94, left hemisphere 37.4
2137 Male, age 80, left hemisphere 33.1
1891 Female, age 85, both hemispheres 31.7
1867 Male, age 76, both hemispheres 31.3
2436 Male, age 74, both hemispheres 26.9
Parahippocampal cortex
nTPM: 35.3
2622 Female, age 67, right hemisphere 39.0
1933 Female, age 85, both hemispheres 38.3
1850 Male, age 80, both hemispheres 37.2
2532 Female, age 72, left hemisphere 36.5
2692 Male, age 74, both hemispheres 35.7
2693 Female, age 94, both hemispheres 35.0
2245 Female, age 91, both hemispheres 34.4
1990 Female, age 91, right hemisphere 32.5
2018 Male, age 76, both hemispheres 32.5
2250 Female, age 67, right hemisphere 32.2
Perirhinal gyrus
nTPM: 36.2
1794 Male, age 80, right hemisphere 39.4
2521 Female, age 94, right hemisphere 38.3
1847 Female, age 91, left hemisphere 35.8
1841 Female, age 85, right hemisphere 33.9
2848 Male, age 76, right hemisphere 33.6
Subiculum
nTPM: 32.2
1977 Female, age 85, both hemispheres 35.1
2042 Male, age 76, both hemispheres 34.6
2619 Male, age 74, both hemispheres 32.9
2729 Female, age 91, right hemisphere 32.9
1901 Male, age 80, both hemispheres 30.4
2438 Female, age 94, left hemisphere 27.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 27.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.1
Samples: 197

Max nTPM: 45.1
Min nTPM: 12.4
Std nTPM: 6.0
Median nTPM: 26.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 45.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 43.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 42.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 39.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 39.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 38.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 38.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 37.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 37.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 37.0
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 37.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 23.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.9
FF:10169-103B7 60 years, female 25.9
FF:10153-102I9 76 years, female 21.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 14.1
Pig sample Sample description nTPM
Subiculum
nTPM: 13.3
Samples: 4

Max nTPM: 15.7
Min nTPM: 12.0
Sample A Female 15.7
Sample B Female 12.5
Sample C Male 13.1
Sample D Male 12.0
Dorsal hippocampus
nTPM: 13.4
Samples: 4

Max nTPM: 16.4
Min nTPM: 10.0
Sample A Female 16.4
Sample B Female 13.3
Sample C Male 13.8
Sample D Male 10.0
Entorhinal cortex
nTPM: 13.0
Samples: 4

Max nTPM: 14.8
Min nTPM: 11.2
Sample A Female 14.8
Sample B Female 11.2
Sample C Male 14.4
Sample D Male 11.5
Ventral hippocampus
nTPM: 14.1
Samples: 4

Max nTPM: 18.0
Min nTPM: 10.8
Sample A Female 14.0
Sample B Female 10.8
Sample C Male 18.0
Sample D Male 13.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 26.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.6
Samples: 4

Max nTPM: 25.4
Min nTPM: 21.3
Sample A Male 23.2
Sample B Male 21.3
Sample C Female 24.5
Sample D Female 25.4
Hippocampal formation
nTPM: 26.1
Samples: 4

Max nTPM: 30.4
Min nTPM: 23.3
Sample A Male 23.3
Sample B Male 26.2
Sample C Female 30.4
Sample D Female 24.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
68498980 Antisense, RP_050113_02_G03, Mouse strain C57BL/6J (56 days, male) 1.8

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