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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
417.1
nTPM
FANTOM5:
412.0
Scaled Tags Per Million
Pig:
231.3
nTPM
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
417.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 155.4
1984
Male, age 76, both hemispheres
221.7
2301
Female, age 85, both hemispheres
170.5
2188
Female, age 91, both hemispheres
126.0
2090
Male, age 80, both hemispheres
103.3
Dorsal cochlear nucleus nTPM: 136.5
2370
Male, age 61, both hemispheres
179.0
2058
Male, age 76, both hemispheres
167.7
2187
Female, age 91, both hemispheres
144.1
2378
Male, age 80, both hemispheres
98.5
2802
Male, age 74, right hemisphere
93.2
Dorsal tegmental nucleus nTPM: 154.4
2083
Male, age 80, both hemispheres
189.1
1936
Male, age 76, left hemisphere
168.0
2358
Male, age 61, both hemispheres
161.5
2326
Male, age 74, both hemispheres
98.8
Dorsolateral tegmental area nTPM: 138.1
2141
Male, age 76, both hemispheres
191.9
2654
Male, age 80, both hemispheres
175.9
2751
Female, age 85, both hemispheres
149.4
2360
Male, age 74, both hemispheres
110.2
2337
Male, age 61, both hemispheres
63.1
Kolliker-Fuse nucleus nTPM: 169.7
2793
Female, age 91, left hemisphere
209.1
2163
Male, age 80, both hemispheres
208.7
2315
Male, age 76, right hemisphere
91.2
Lateral lemniscal nuclei nTPM: 352.8
2169
Male, age 76, both hemispheres
439.1
2453
Male, age 74, right hemisphere
413.8
2036
Male, age 80, both hemispheres
364.0
2746
Female, age 85, left hemisphere
315.4
2320
Female, age 91, left hemisphere
231.6
Lateral parabrachial nucleus nTPM: 205.2
2139
Female, age 85, right hemisphere
364.0
2790
Male, age 61, both hemispheres
211.6
2013
Male, age 80, both hemispheres
187.6
2792
Male, age 76, both hemispheres
57.5
Lateral vestibular nucleus nTPM: 179.7
2184
Male, age 76, both hemispheres
215.9
2311
Male, age 80, both hemispheres
143.5
Locus coeruleus nTPM: 284.5
2720
Male, age 74, both hemispheres
435.2
2123
Female, age 91, both hemispheres
365.1
1980
Male, age 76, both hemispheres
256.8
2014
Male, age 55, unknown
250.1
2317
Female, age 72, unknown
239.6
2162
Male, age 80, both hemispheres
230.3
2788
Male, age 74, unknown
214.3
Medial parabrachial nucleus nTPM: 189.6
2156
Male, age 61, both hemispheres
232.3
2854
Male, age 80, both hemispheres
215.0
2786
Male, age 76, both hemispheres
182.0
2170
Female, age 91, both hemispheres
161.7
2463
Female, age 85, right hemisphere
156.9
Medial periolivary nuclei nTPM: 290.8
2171
Female, age 85, both hemispheres
493.9
2063
Male, age 76, both hemispheres
396.0
2791
Male, age 74, right hemisphere
237.8
2458
Female, age 91, both hemispheres
182.6
2081
Male, age 80, both hemispheres
143.7
Motor facial nucleus nTPM: 308.3
2062
Male, age 76, both hemispheres
466.7
2365
Male, age 74, right hemisphere
365.1
2327
Male, age 80, both hemispheres
324.7
2697
Female, age 85, both hemispheres
281.9
2795
Female, age 91, both hemispheres
221.5
2126
Male, age 61, both hemispheres
190.0
Motor trigeminal nucleus nTPM: 229.9
2560
Male, age 74, both hemispheres
294.5
2079
Male, age 80, both hemispheres
286.2
2335
Male, age 61, both hemispheres
222.9
2309
Male, age 76, both hemispheres
180.5
2321
Female, age 91, both hemispheres
165.4
Nuclei of the trapezoid body nTPM: 377.2
2159
Male, age 61, both hemispheres
573.6
2735
Female, age 85, both hemispheres
460.6
1983
Male, age 76, both hemispheres
389.4
2166
Male, age 80, both hemispheres
247.7
2368
Female, age 91, both hemispheres
214.6
Nucleus raphe magnus nTPM: 417.1
2160
Male, age 61, both hemispheres
652.5
2172
Female, age 85, both hemispheres
540.4
2455
Male, age 74, both hemispheres
493.1
2328
Male, age 80, both hemispheres
298.3
2051
Male, age 76, both hemispheres
298.1
2459
Female, age 91, both hemispheres
220.5
Paramedian reticular nucleus nTPM: 244.3
2050
Female, age 85, both hemispheres
346.0
2313
Male, age 61, both hemispheres
285.4
2057
Male, age 80, both hemispheres
236.3
2052
Male, age 76, both hemispheres
109.6
Pedunculopontine tegmental nucleus nTPM: 176.8
1921
Female, age 85, both hemispheres
213.9
2334
Male, age 80, both hemispheres
170.3
2338
Male, age 61, both hemispheres
146.0
Pontine nuclei nTPM: 356.8
2787
Female, age 85, both hemispheres
603.7
2727
Male, age 61, right hemisphere
532.2
1968
Male, age 76, left hemisphere
394.7
1863
Male, age 55, unknown
389.9
2109
Female, age 72, unknown
325.1
2454
Male, age 74, left hemisphere
253.9
2115
Male, age 80, left hemisphere
196.1
2319
Female, age 91, both hemispheres
158.6
Pontine raphe nucleus nTPM: 275.8
2122
Female, age 85, midline
351.4
2853
Male, age 76, midline
200.2
Posteroventral cochlear nucleus nTPM: 129.8
2752
Female, age 85, both hemispheres
256.3
2070
Male, age 76, both hemispheres
177.2
2371
Male, age 61, both hemispheres
144.9
2341
Male, age 80, both hemispheres
62.4
2135
Female, age 91, both hemispheres
8.0
Principal sensory trigeminal nucleus nTPM: 321.6
2158
Male, age 61, both hemispheres
558.6
2008
Male, age 80, left hemisphere
346.4
2367
Female, age 91, left hemisphere
194.5
2324
Male, age 76, both hemispheres
187.0
Reticular pontine nucleus, caudal nTPM: 233.1
2332
Male, age 80, right hemisphere
370.2
2092
Male, age 76, both hemispheres
272.3
2457
Female, age 91, both hemispheres
159.6
2559
Male, age 74, both hemispheres
130.1
Reticular pontine nucleus, oral nTPM: 222.6
2361
Male, age 74, both hemispheres
310.8
2012
Female, age 85, both hemispheres
308.0
2167
Male, age 76, both hemispheres
169.4
1939
Male, age 80, both hemispheres
167.2
2366
Female, age 91, both hemispheres
157.5
Reticulotegmental nucleus nTPM: 218.8
2325
Male, age 76, both hemispheres
283.7
2452
Male, age 74, both hemispheres
223.2
2333
Male, age 80, both hemispheres
197.8
2322
Female, age 91, both hemispheres
170.3
Spinal trigeminal nucleus, oral nTPM: 215.2
2737
Female, age 85, both hemispheres
237.4
1978
Male, age 76, both hemispheres
215.8
2164
Male, age 80, both hemispheres
192.5
Subcoeruleus area nTPM: 219.9
2089
Male, age 76, left hemisphere
307.1
2323
Female, age 91, left hemisphere
283.9
1958
Male, age 80, both hemispheres
254.0
2451
Male, age 74, both hemispheres
146.7
2369
Female, age 85, left hemisphere
108.0
Superior olive nTPM: 287.1
1875
Female, age 85, both hemispheres
409.5
2364
Male, age 74, right hemisphere
260.1
2020
Male, age 76, both hemispheres
259.8
2329
Male, age 80, right hemisphere
259.6
2561
Female, age 91, both hemispheres
246.5
Ventral periolivary nuclei nTPM: 318.0
2130
Female, age 85, both hemispheres
411.7
2165
Male, age 80, both hemispheres
379.9
2794
Female, age 91, left hemisphere
266.5
2023
Male, age 76, both hemispheres
214.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 260.6
2449
Male, age 74, both hemispheres
422.7
1959
Male, age 76, both hemispheres
318.8
2840
Female, age 85, both hemispheres
250.0
2161
Male, age 80, both hemispheres
245.0
2359
Male, age 61, both hemispheres
172.7
2456
Female, age 91, both hemispheres
154.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
