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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRIM14 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
34.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
30.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
28.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
27.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
26.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
25.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
25.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
23.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
22.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
21.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
20.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
20.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
20.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
19.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
19.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
19.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
19.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
19.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
18.8
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
18.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
17.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
17.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
17.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
17.5
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
17.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
17.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
17.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
16.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
16.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
16.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
16.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
16.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
15.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
15.3
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
15.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
15.2
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
14.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
14.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
14.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
14.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
14.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
14.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
14.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
14.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
14.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
14.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
14.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
13.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
13.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
13.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
13.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
13.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
13.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
13.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
13.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
13.1
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
13.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
13.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
12.9
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
12.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
12.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
12.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
12.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
12.5
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
12.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
12.4
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
12.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
12.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
12.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
12.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
12.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
12.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
12.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
12.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
11.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
11.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
11.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
11.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
11.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
11.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
11.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
11.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
11.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
11.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
11.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
11.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
11.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
11.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
11.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
11.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
10.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
10.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
10.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
10.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
10.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
10.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
10.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
10.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
10.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
10.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
10.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
10.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
10.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
10.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
10.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
10.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
10.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
10.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
9.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
9.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
9.6
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
9.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
9.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
9.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
9.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
9.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
9.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
9.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
9.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
9.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
9.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
9.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
9.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
9.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
9.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
9.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
9.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
9.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
9.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
9.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
9.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
9.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
9.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
9.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
8.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
8.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
8.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
8.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
8.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
8.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
8.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
8.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
8.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
8.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
8.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
8.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
8.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
8.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
8.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
8.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
8.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
8.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
8.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
8.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
8.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
8.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
8.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
8.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
8.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
8.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
8.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
8.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
8.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
8.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
8.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
8.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
7.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
7.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
7.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
7.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
7.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
7.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
7.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
7.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
7.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
7.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
7.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
7.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
7.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
7.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
7.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
7.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
7.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
7.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
7.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
7.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
7.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
7.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
7.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
6.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
6.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
6.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.8
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
6.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
6.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
6.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
6.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
6.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
6.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
6.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
6.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
6.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
6.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
6.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
6.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
6.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
6.5
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
6.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
6.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
6.3
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
6.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
6.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
6.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
6.3
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
6.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
6.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
6.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
6.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
6.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
6.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
6.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
6.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
6.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
6.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
6.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
6.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
6.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
5.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
5.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
5.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
5.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
5.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
5.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
5.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
5.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
5.8
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
5.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
5.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
5.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
5.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
5.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
5.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
5.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
5.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
5.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
5.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
5.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
5.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
5.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
5.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
5.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
5.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
5.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
5.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
5.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
5.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
5.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
5.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
5.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
5.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
5.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
5.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
5.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
5.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
5.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
5.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
5.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
4.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
4.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
4.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
4.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
4.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
4.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
4.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
4.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
4.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
4.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
4.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
4.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
4.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
4.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
4.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
4.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
4.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
4.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
4.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
4.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
4.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
4.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
4.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
4.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
4.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
4.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
4.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
4.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
4.1
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
4.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
3.9
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
3.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
3.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
3.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
3.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
3.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
3.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
3.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
3.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
3.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
3.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
3.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
3.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
3.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
3.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
3.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
3.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
3.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
3.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
3.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
3.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
3.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
3.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
3.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
3.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
3.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
3.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
3.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
3.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
3.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
3.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
3.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
3.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
2.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
2.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
2.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
2.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
2.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
2.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
2.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
2.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
2.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
2.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
2.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
1.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
1.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
1.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
1.4
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRIM14 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.6
Number of samples
231
Samples
Sample
Description
TPM
DO45287
0 years, male, NA, stage:1, alive, 390 days
28.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
23.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
20.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
20.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
20.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
20.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
20.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
19.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
19.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
18.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
17.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
17.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
17.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
16.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
16.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
16.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
16.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
16.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
16.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
16.3
DO45249
0 years, male, NA, stage:1, alive, 630 days
16.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
16.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
16.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
15.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
15.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
15.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
15.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
15.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
15.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
15.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
15.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
15.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
14.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
14.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
14.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
14.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
14.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
14.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
14.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
14.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
14.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
13.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
13.9
DO45177
0 years, female, NA, stage:3, alive, 1260 days
13.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
13.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
13.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
13.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
13.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
12.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
12.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
12.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
12.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
12.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
12.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
12.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
12.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
12.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
12.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
12.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
12.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
12.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
12.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
11.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
11.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
11.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
11.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
11.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
11.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
11.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
11.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
11.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
11.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
11.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
11.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
11.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
11.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
11.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
11.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
11.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
11.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
11.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
11.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
10.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
10.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
10.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
10.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
10.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
10.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
10.5
DO45269
0 years, male, NA, stage:3, alive, 750 days
10.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
10.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
10.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
10.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
10.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
10.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
10.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
9.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
9.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
9.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
9.8
DO23524
0 years, female, NA, stage:2, alive, 1050 days
9.7
DO50800
0 years, male, NA, stage:2, alive, 510 days
9.7
DO45239
0 years, male, NA, stage:2, alive, 870 days
9.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
9.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
9.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
9.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
9.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
9.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
9.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
9.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
9.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
9.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
9.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
9.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
9.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
9.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
8.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
8.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
8.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
8.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
8.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
8.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
8.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
8.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
8.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
8.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
8.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
8.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
8.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
8.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
8.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
8.3
DO48721
0 years, female, NA, stage:1, alive, 900 days
8.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
8.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
8.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
7.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
7.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
7.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
7.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
7.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
7.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
7.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
7.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
7.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
7.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
7.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
7.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
7.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
7.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
7.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
7.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
7.2
DO45145
0 years, male, NA, stage:3, dead, 60 days
7.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
7.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
7.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
7.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
7.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
7.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
7.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
6.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
6.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
6.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
6.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
6.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
6.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
6.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
6.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
6.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
6.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
6.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
6.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
6.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
6.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
6.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
6.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
6.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
6.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
6.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
6.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
6.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
5.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
5.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
5.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
5.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
5.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
5.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
5.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
5.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
5.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
5.5
DO50859
0 years, male, NA, stage:2, alive, 180 days
5.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
5.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
5.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
5.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
5.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
5.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
5.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
5.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
5.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
5.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
5.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
4.9
DO50817
0 years, male, NA, stage:2, alive, 390 days
4.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
4.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
4.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
4.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
4.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
4.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
4.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
4.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
4.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
4.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
4.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
4.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
4.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
4.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
3.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
3.6
DO45149
0 years, female, NA, stage:2, alive, 1260 days
3.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
2.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
2.9
DO45125
0 years, male, NA, stage:3, alive, 1680 days
2.7
DO50814
0 years, male, NA, stage:3, alive, 420 days
2.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
2.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
2.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
2.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
2.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
1.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
1.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
1.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
327
Tumor
1.2
113
Tumor
1.2
955
Tumor
1.0
921
Tumor
0.9
553
Tumor
0.8
277
Tumor
0.8
865
Tumor
0.7
515
Tumor
0.7
343
Tumor
0.7
616
Normal
0.7
212
Normal
0.7
981
Tumor
0.7
147
Tumor
0.6
358
Normal
0.6
628
Normal
0.6
448
Normal
0.6
823
Tumor
0.6
396
Normal
0.6
1015
Tumor
0.6
262
Normal
0.6
1028
Normal
0.6
474
Normal
0.5
214
Normal
0.5
663
Tumor
0.5
464
Normal
0.5
617
Tumor
0.5
286
Normal
0.5
353
Tumor
0.5
354
Normal
0.5
126
Normal
0.5
218
Normal
0.5
477
Tumor
0.5
463
Tumor
0.5
344
Normal
0.5
914
Normal
0.5
554
Normal
0.4
526
Normal
0.4
171
Tumor
0.4
648
Normal
0.4
136
Normal
0.4
416
Normal
0.4
213
Tumor
0.4
436
Normal
0.4
328
Normal
0.4
356
Normal
0.4
727
Tumor
0.4
1016
Normal
0.4
1043
Tumor
0.4
636
Normal
0.4
1042
Normal
0.4
452
Normal
0.4
258
Normal
0.4
368
Normal
0.4
956
Normal
0.4
514
Normal
0.4
536
Normal
0.4
918
Normal
0.4
958
Normal
0.4
271
Tumor
0.4
728
Normal
0.4
557
Tumor
0.4
1025
Tumor
0.3
558
Normal
0.3
724
Normal
0.3
968
Normal
0.3
278
Normal
0.3
912
Normal
0.3
312
Normal
0.3
884
Normal
0.3
386
Normal
0.3
518
Normal
0.3
723
Tumor
0.3
662
Normal
0.3
268
Normal
0.3
524
Normal
0.3
138
Normal
0.3
528
Normal
0.3
1014
Normal
0.3
868
Normal
0.3
142
Normal
0.3
742
Normal
0.3
111
Normal
0.3
642
Normal
0.3
388
Normal
0.3
952
Normal
0.3
128
Normal
0.3
228
Normal
0.3
922
Normal
0.3
1022
Normal
0.3
188
Normal
0.3
1032
Normal
0.3
966
Normal
0.3
867
Tumor
0.3
978
Normal
0.3
1046
Normal
0.3
523
Tumor
0.3
435
Tumor
0.3
222
Normal
0.3
365
Tumor
0.2
314
Normal
0.2
394
Normal
0.2
468
Normal
0.2
666
Normal
0.2
392
Normal
0.2
494
Normal
0.2
664
Normal
0.2
172
Normal
0.2
352
Normal
0.2
492
Normal
0.2
471
Tumor
0.2
284
Normal
0.2
568
Normal
0.2
567
Tumor
0.2
926
Normal
0.2
272
Normal
0.2
976
Normal
0.2
1026
Normal
0.2
964
Normal
0.2
1044
Normal
0.2
217
Tumor
0.2
114
Normal
0.2
124
Normal
0.2
983
Tumor
0.2
393
Tumor
0.2
686
Normal
0.2
232
Normal
0.2
672
Normal
0.2
434
Normal
0.2
132
Normal
0.2
944
Normal
0.2
516
Normal
0.2
446
Normal
0.2
221
Tumor
0.2
533
Tumor
0.2
746
Normal
0.2
534
Normal
0.2
858
Normal
0.2
123
Tumor
0.2
141
Tumor
0.2
391
Tumor
0.2
564
Normal
0.2
627
Tumor
0.2
462
Normal
0.1
916
Normal
0.1
618
Normal
0.1
982
Normal
0.1
493
Tumor
0.1
472
Normal
0.1
451
Tumor
0.1
737
Tumor
0.1
738
Normal
0.1
778
Normal
0.1
415
Tumor
0.1
484
Normal
0.1
432
Normal
0.1
224
Normal
0.1
851
Tumor
0.1
466
Normal
0.1
196
Normal
0.1
786
Normal
0.1
874
Normal
0.1
467
Tumor
0.1
698
Normal
0.1
332
Normal
0.1
425
Tumor
0.1
572
Normal
0.1
911
Tumor
0.1
862
Normal
0.1
574
Normal
0.1
824
Normal
0.1
721
Tumor
0.1
148
Normal
0.1
864
Normal
0.1
362
Normal
0.1
881
Tumor
0.1
984
Normal
0.1
816
Normal
0.1
661
Tumor
0.1
924
Normal
0.1
395
Tumor
0.1
444
Normal
0.1
954
Normal
0.0
411
Tumor
0.0
965
Tumor
0.0
861
Tumor
0.0
714
Normal
0.0
938
Normal
0.0
1031
Tumor
0.0
722
Normal
0.0
385
Tumor
0.0
364
Normal
0.0
866
Normal
0.0
456
Normal
0.0
538
Normal
0.0
815
Tumor
0.0
953
Tumor
0.0
414
Normal
0.0
376
Normal
0.0
482
Normal
0.0
913
Tumor
0.0
267
Tumor
0.0
695
Tumor
0.0
342
Normal
0.0
186
Normal
0.0
546
Normal
0.0
852
Normal
0.0
487
Tumor
0.0
298
Normal
0.0
162
Normal
0.0
498
Normal
0.0
1045
Tumor
0.0
943
Tumor
0.0
355
Tumor
0.0
412
Normal
0.0
428
Normal
0.0
957
Tumor
0.0
231
Tumor
0.0
424
Normal
-0.1
741
Tumor
-0.1
422
Normal
-0.1
497
Tumor
-0.1
478
Normal
-0.1
716
Normal
-0.1
433
Tumor
-0.1
641
Tumor
-0.1
696
Normal
-0.1
426
Normal
-0.1
744
Normal
-0.1
481
Tumor
-0.1
814
Normal
-0.1
146
Normal
-0.1
341
Tumor
-0.1
192
Normal
-0.1
882
Normal
-0.1
915
Tumor
-0.1
127
Tumor
-0.1
917
Tumor
-0.1
137
Tumor
-0.1
366
Normal
-0.1
878
Normal
-0.1
461
Tumor
-0.1
1041
Tumor
-0.1
387
Tumor
-0.2
483
Tumor
-0.2
857
Tumor
-0.2
191
Tumor
-0.2
261
Tumor
-0.2
161
Tumor
-0.2
977
Tumor
-0.2
975
Tumor
-0.2
777
Tumor
-0.2
1013
Tumor
-0.2
384
Normal
-0.2
513
Tumor
-0.2
491
Tumor
-0.2
145
Tumor
-0.2
517
Tumor
-0.2
615
Tumor
-0.2
413
Tumor
-0.2
227
Tumor
-0.2
963
Tumor
-0.2
455
Tumor
-0.2
447
Tumor
-0.2
756
Normal
-0.2
383
Tumor
-0.2
923
Tumor
-0.3
745
Tumor
-0.3
488
Normal
-0.3
527
Tumor
-0.3
818
Normal
-0.3
883
Tumor
-0.3
571
Tumor
-0.3
525
Tumor
-0.3
421
Tumor
-0.3
195
Tumor
-0.3
1027
Tumor
-0.3
465
Tumor
-0.3
223
Tumor
-0.3
367
Tumor
-0.3
357
Tumor
-0.3
967
Tumor
-0.3
423
Tumor
-0.4
537
Tumor
-0.4
443
Tumor
-0.4
647
Tumor
-0.4
361
Tumor
-0.4
573
Tumor
-0.4
285
Tumor
-0.4
185
Tumor
-0.4
211
Tumor
-0.4
713
Tumor
-0.4
755
Tumor
-0.4
563
Tumor
-0.4
427
Tumor
-0.4
297
Tumor
-0.4
873
Tumor
-0.4
817
Tumor
-0.4
697
Tumor
-0.4
187
Tumor
-0.5
863
Tumor
-0.5
545
Tumor
-0.5
671
Tumor
-0.5
331
Tumor
-0.5
311
Tumor
-0.5
785
Tumor
-0.5
375
Tumor
-0.5
351
Tumor
-0.5
951
Tumor
-0.5
813
Tumor
-0.5
877
Tumor
-0.5
363
Tumor
-0.5
431
Tumor
-0.5
283
Tumor
-0.6
925
Tumor
-0.6
665
Tumor
-0.6
125
Tumor
-0.6
313
Tumor
-0.6
135
Tumor
-0.6
473
Tumor
-0.6
635
Tumor
-0.7
445
Tumor
-0.7
257
Tumor
-0.7
1021
Tumor
-0.8
535
Tumor
-0.9
743
Tumor
-0.9
685
Tumor
-0.9
715
Tumor
-1.0
112
Tumor
-1.1
131
Tumor
-1.2
937
Tumor
-1.3
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
