HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:20.6 nTPM
HPA Brain:67.0 nTPM
GTEx:20.6 nTPM
FANTOM5:101.2 Scaled Tags Per Million
Pig:30.2 nTPM
Mouse:49.0 nTPM
Allen mouse:14.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014319
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 67.0
Sample id Sample description nTPM
Hippocampus
nTPM: 66.2
1855 Male, age 76, left hemisphere 82.5
1898 Male, age 80, left hemisphere 72.4
2529 Female, age 94, left hemisphere 62.6
2621 Female, age 67, right hemisphere 62.4
1911 Female, age 85, right hemisphere 61.9
2148 Female, age 91, left hemisphere 55.1
Dentate gyrus
nTPM: 57.2
2010 Male, age 76, both hemispheres 78.1
2530 Female, age 94, left hemisphere 64.8
1927 Female, age 91, both hemispheres 53.6
2246 Female, age 85, both hemispheres 52.6
2528 Male, age 74, both hemispheres 48.8
2531 Female, age 67, both hemispheres 45.0
Entorhinal gyrus
nTPM: 53.1
2117 Female, age 91, right hemisphere 64.1
1938 Female, age 85, left hemisphere 57.6
1787 Male, age 76, left hemisphere 55.2
2764 Male, age 80, right hemisphere 52.7
2686 Male, age 75, right hemisphere 45.4
2613 Female, age 94, left hemisphere 43.3
Hippocampus, CA1
nTPM: 67.0
2749 Male, age 80, left hemisphere 116.4
1873 Female, age 85, both hemispheres 69.3
2527 Male, age 74, both hemispheres 55.1
2045 Male, age 76, both hemispheres 48.6
2082 Female, age 91, right hemisphere 45.9
Hippocampus, CA2
nTPM: 59.9
1892 Male, age 76, both hemispheres 79.0
1963 Male, age 80, left hemisphere 78.6
2249 Male, age 74, both hemispheres 53.7
2113 Female, age 91, right hemisphere 51.0
2437 Female, age 94, left hemisphere 48.9
1940 Female, age 85, left hemisphere 48.2
Hippocampus, CA3
nTPM: 61.7
2137 Male, age 80, left hemisphere 92.4
1867 Male, age 76, both hemispheres 68.9
1891 Female, age 85, both hemispheres 62.3
2861 Female, age 67, both hemispheres 53.5
2620 Female, age 94, left hemisphere 51.8
2436 Male, age 74, both hemispheres 41.2
Parahippocampal cortex
nTPM: 49.8
1850 Male, age 80, both hemispheres 56.8
2245 Female, age 91, both hemispheres 56.6
1933 Female, age 85, both hemispheres 55.5
2692 Male, age 74, both hemispheres 51.3
1990 Female, age 91, right hemisphere 51.0
2532 Female, age 72, left hemisphere 47.9
2693 Female, age 94, both hemispheres 47.2
2622 Female, age 67, right hemisphere 44.2
2250 Female, age 67, right hemisphere 43.8
2018 Male, age 76, both hemispheres 43.3
Perirhinal gyrus
nTPM: 52.0
2848 Male, age 76, right hemisphere 55.1
1841 Female, age 85, right hemisphere 53.1
1794 Male, age 80, right hemisphere 51.9
1847 Female, age 91, left hemisphere 50.2
2521 Female, age 94, right hemisphere 49.4
Subiculum
nTPM: 59.9
1901 Male, age 80, both hemispheres 75.6
2042 Male, age 76, both hemispheres 66.2
2438 Female, age 94, left hemisphere 56.8
1977 Female, age 85, both hemispheres 56.3
2729 Female, age 91, right hemisphere 55.6
2619 Male, age 74, both hemispheres 48.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 20.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.6
Samples: 197

Max nTPM: 37.3
Min nTPM: 6.8
Std nTPM: 5.7
Median nTPM: 20.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 37.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 36.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 36.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 36.0
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 34.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 33.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 32.3
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 31.9
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 31.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 30.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 30.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 101.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 101.2
FF:10153-102I9 76 years, female 127.6
FF:10169-103B7 60 years, female 74.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 30.2
Pig sample Sample description nTPM
Subiculum
nTPM: 26.8
Samples: 4

Max nTPM: 32.2
Min nTPM: 23.1
Sample A Female 32.2
Sample B Female 23.1
Sample C Male 26.1
Sample D Male 25.7
Dorsal hippocampus
nTPM: 25.5
Samples: 4

Max nTPM: 28.3
Min nTPM: 20.6
Sample A Female 28.3
Sample B Female 26.1
Sample C Male 26.8
Sample D Male 20.6
Entorhinal cortex
nTPM: 30.2
Samples: 4

Max nTPM: 32.3
Min nTPM: 28.5
Sample A Female 32.3
Sample B Female 30.0
Sample C Male 30.0
Sample D Male 28.5
Ventral hippocampus
nTPM: 25.0
Samples: 4

Max nTPM: 28.3
Min nTPM: 20.3
Sample A Female 28.3
Sample B Female 20.3
Sample C Male 25.8
Sample D Male 25.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 49.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.8
Samples: 4

Max nTPM: 50.3
Min nTPM: 39.2
Sample A Male 39.9
Sample B Male 41.6
Sample C Female 39.2
Sample D Female 50.3
Hippocampal formation
nTPM: 49.0
Samples: 4

Max nTPM: 60.0
Min nTPM: 39.8
Sample A Male 43.5
Sample B Male 52.7
Sample C Female 60.0
Sample D Female 39.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 14.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.5
74658078 Antisense, RP_060220_04_D03, Mouse strain C57BL/6J (56 days, male) 14.7
70946506 Antisense, RP_050428_02_F04, Mouse strain C57BL/6J (56 days, male) 14.2

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