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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
0.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
4.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
3.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
3.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
3.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
1.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
1.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
1.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
1.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
1.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
0.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
0.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
0.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
0.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
0.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PRUNE2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
41.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
226.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
161.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
155.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
147.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
147.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
139.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
134.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
131.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
127.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
127.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
123.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
123.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
121.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
118.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
117.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
116.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
115.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
112.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
110.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
108.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
107.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
106.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
105.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
104.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
102.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
102.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
101.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
101.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
100.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
99.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
99.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
99.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
95.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
95.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
95.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
95.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
95.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
94.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
91.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
91.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
90.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
89.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
88.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
87.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
87.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
87.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
86.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
86.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
86.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
85.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
84.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
82.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
82.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
80.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
79.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
79.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
79.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
79.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
78.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
77.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
77.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
77.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
77.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
76.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
76.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
76.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
76.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
76.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
76.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
76.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
76.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
75.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
75.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
74.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
74.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
74.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
73.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
72.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
72.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
72.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
71.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
71.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
71.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
71.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
71.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
71.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
70.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
70.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
69.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
69.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
69.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
69.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
68.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
67.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
67.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
67.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
67.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
66.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
66.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
66.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
65.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
65.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
65.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
65.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
65.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
65.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
64.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
64.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
64.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
64.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
63.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
63.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
63.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
63.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
62.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
62.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
62.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
62.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
61.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
61.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
61.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
61.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
61.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
60.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
60.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
60.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
60.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
59.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
59.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
59.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
58.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
58.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
58.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
58.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
58.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
58.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
58.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
58.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
58.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
58.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
58.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
57.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
57.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
57.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
57.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
57.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
57.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
56.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
56.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
56.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
56.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
56.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
56.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
55.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
55.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
55.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
55.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
55.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
54.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
54.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
54.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
54.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
53.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
53.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
53.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
53.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
53.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
53.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
52.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
52.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
51.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
51.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
51.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
51.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
50.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
50.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
50.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
50.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
50.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
50.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
50.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
49.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
49.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
49.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
49.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
49.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
49.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
48.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
48.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
48.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
48.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
47.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
47.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
47.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
47.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
47.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
47.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
47.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
47.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
46.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
46.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
46.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
46.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
46.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
45.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
45.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
45.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
45.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
44.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
44.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
44.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
44.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
44.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
44.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
44.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
43.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
43.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
43.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
43.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
43.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
43.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
43.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
43.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
43.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
42.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
42.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
42.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
42.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
42.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
42.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
42.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
42.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
42.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
42.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
41.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
41.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
41.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
40.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
40.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
40.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
40.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
40.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
40.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
39.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
39.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
39.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
39.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
39.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
39.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
38.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
38.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
38.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
38.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
38.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
38.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
37.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
37.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
37.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
37.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
37.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
36.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
36.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
36.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
36.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
36.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
36.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
36.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
36.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
36.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
35.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
35.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
34.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
34.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
34.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
34.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
34.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
34.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
34.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
34.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
33.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
33.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
33.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
33.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
33.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
33.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
33.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
33.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
33.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
33.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
33.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
32.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
32.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
32.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
32.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
32.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
32.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
32.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
31.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
31.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
31.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
31.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
31.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
31.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
31.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
30.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
30.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
30.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
30.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
30.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
30.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
30.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
29.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
29.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
28.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
28.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
28.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
27.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
27.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
27.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
27.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
27.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
26.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
26.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
26.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
26.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
26.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
26.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
26.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
26.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
26.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
26.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
25.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
25.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
25.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
25.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
25.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
24.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
24.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
24.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
24.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
24.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
24.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
24.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
24.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
23.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
23.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
23.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
23.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
23.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
23.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
23.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
22.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
22.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
22.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
22.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
22.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
22.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
21.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
21.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
21.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
21.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
21.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
20.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
20.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
20.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
19.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
19.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
19.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
19.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
19.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
19.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
18.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
18.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
18.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
18.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
18.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
18.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
18.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
17.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
17.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
17.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
17.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
17.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
17.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
17.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
16.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
16.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
16.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
16.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
16.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
16.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
16.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
16.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
16.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
15.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
15.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
15.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
15.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
15.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
15.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
14.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
14.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
14.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
14.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
14.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
14.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
14.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
13.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
13.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
13.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
13.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
13.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
13.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
13.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
13.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
13.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
12.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
12.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
12.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
12.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
12.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
12.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
12.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
12.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
12.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
11.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
11.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
11.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
11.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
11.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
11.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
11.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
11.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
10.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
10.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
10.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
10.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
9.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
9.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
9.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
9.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
9.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
8.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
8.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
8.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
8.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
8.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
8.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
8.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
7.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
7.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
7.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
7.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
7.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
7.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
6.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
6.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
6.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
6.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
6.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
6.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
6.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
5.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
5.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
5.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
5.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
5.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
4.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
4.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
4.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
4.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
4.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
4.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
4.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
3.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
3.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
3.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
3.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
3.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
2.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
2.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
2.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
2.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
1.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
1.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
1.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
1.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
1.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
1.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
1.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
1.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
1.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
1.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
0.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
0.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
0.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PRUNE2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
143.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
119.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
110.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
106.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
99.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
99.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
98.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
95.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
94.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
94.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
85.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
85.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
84.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
84.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
80.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
78.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
78.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
77.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
76.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
69.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
67.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
66.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
65.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
64.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
63.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
61.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
60.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
60.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
58.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
57.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
57.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
57.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
56.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
56.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
54.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
52.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
52.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
51.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
48.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
48.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
47.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
46.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
45.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
45.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
44.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
44.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
43.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
43.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
43.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
42.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
42.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
42.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
41.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
41.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
41.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
40.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
38.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
37.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
37.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
34.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
34.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
33.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
33.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
33.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
32.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
31.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
31.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
31.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
30.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
30.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
30.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
28.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
26.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
26.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
24.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
24.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
24.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
24.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
23.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
23.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
23.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
22.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
21.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
21.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
19.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
18.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
18.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
17.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
15.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
15.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
14.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
13.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
11.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
10.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
8.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
7.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
6.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
5.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
3.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PRUNE2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
35.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
178.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
174.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
162.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
135.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
127.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
109.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
103.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
96.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
95.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
95.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
94.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
91.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
89.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
87.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
87.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
86.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
85.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
84.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
83.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
82.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
82.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
80.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
79.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
77.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
75.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
75.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
70.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
69.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
68.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
68.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
67.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
65.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
65.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
65.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
64.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
64.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
63.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
63.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
63.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
63.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
62.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
62.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
61.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
61.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
61.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
60.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
60.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
60.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
59.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
59.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
59.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
58.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
57.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
57.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
57.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
57.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
57.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
56.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
55.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
55.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
55.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
54.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
54.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
53.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
53.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
52.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
52.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
52.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
52.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
52.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
51.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
51.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
51.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
50.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
49.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
49.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
49.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
49.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
48.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
48.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
47.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
47.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
47.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
47.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
47.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
45.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
45.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
45.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
45.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
44.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
44.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
44.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
43.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
43.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
43.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
43.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
43.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
42.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
42.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
42.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
41.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
41.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
41.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
41.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
41.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
41.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
40.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
40.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
40.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
39.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
39.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
39.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
39.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
38.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
38.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
37.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
37.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
37.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
36.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
35.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
35.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
34.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
34.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
34.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
34.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
33.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
33.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
32.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
32.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
31.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
31.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
31.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
31.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
31.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
31.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
31.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
31.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
31.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
30.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
30.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
30.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
30.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
30.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
29.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
29.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
28.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
28.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
27.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
27.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
27.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
26.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
26.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
26.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
26.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
25.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
24.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
24.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
24.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
24.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
23.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
23.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
23.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
22.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
22.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
22.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
22.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
22.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
21.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
21.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
21.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
21.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
21.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
20.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
20.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
19.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
19.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
19.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
19.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
19.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
19.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
18.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
18.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
18.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
18.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
18.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
18.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
17.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
17.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
16.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
16.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
16.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
15.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
15.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
15.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
15.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
15.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
15.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
14.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
14.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
14.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
14.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
13.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
13.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
13.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
12.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
12.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
12.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
12.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
12.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
11.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
11.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
11.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
11.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
11.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
11.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
11.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
9.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
9.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
9.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
9.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
9.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
9.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
9.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
8.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
8.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
7.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
7.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
7.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
7.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
6.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
6.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
6.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
6.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
6.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
5.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
5.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
4.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
4.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
4.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
4.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
4.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
4.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
4.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
3.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
3.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
3.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
3.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
3.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
3.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
3.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
3.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
3.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
2.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
2.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
2.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
1.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
1.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
1.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
1.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
1.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
1.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
0.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
0.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
0.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002270011
Tumor
2.0
CPT0088970003
Tumor
1.7
CPT0001540009
Tumor
1.4
CPT0078800003
Tumor
1.4
CPT0012370003
Tumor
1.2
CPT0014450004
Tumor
1.0
CPT0002350011
Tumor
1.0
CPT0014370004
Tumor
1.0
CPT0078830003
Tumor
0.9
CPT0024670003
Tumor
0.9
CPT0011410003
Tumor
0.9
CPT0015730003
Tumor
0.9
CPT0012900004
Tumor
0.9
CPT0009000003
Tumor
0.9
CPT0009060003
Tumor
0.9
CPT0006440003
Tumor
0.8
CPT0000870016
Tumor
0.8
CPT0077110003
Tumor
0.8
CPT0079270003
Tumor
0.8
CPT0006630003
Tumor
0.8
CPT0025110003
Tumor
0.8
CPT0019130003
Tumor
0.8
CPT0085670003
Tumor
0.7
CPT0078930003
Tumor
0.7
CPT0000640003
Tumor
0.7
CPT0079480003
Tumor
0.7
CPT0065810003
Tumor
0.6
CPT0064370003
Tumor
0.6
CPT0065430003
Tumor
0.6
CPT0092160003
Tumor
0.6
CPT0001500009
Tumor
0.6
CPT0086360003
Tumor
0.6
CPT0079230003
Tumor
0.6
CPT0069000003
Tumor
0.5
CPT0081990003
Tumor
0.5
CPT0063320003
Tumor
0.5
CPT0086820003
Tumor
0.5
CPT0026410003
Tumor
0.5
CPT0000780007
Tumor
0.5
CPT0066470004
Tumor
0.5
CPT0071150004
Tumor
0.5
CPT0015910003
Tumor
0.5
CPT0007320003
Tumor
0.4
CPT0088900003
Tumor
0.4
CPT0020120003
Tumor
0.4
CPT0065930003
Tumor
0.4
CPT0025050003
Tumor
0.4
CPT0079380003
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0089460004
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0065750003
Tumor
0.3
CPT0092790003
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0086950003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0025350003
Tumor
0.2
CPT0001180009
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0023350003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0081600003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0081880003
Tumor
0.1
CPT0007860003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0069160003
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0075130003
Tumor
0.0
CPT0001260009
Tumor
0.0
CPT0012550003
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0001220008
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0017850003
Tumor
-0.1
CPT0021240003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0019990003
Tumor
-0.2
CPT0001190001
Normal
-0.2
CPT0001350001
Normal
-0.2
CPT0075560003
Tumor
-0.2
CPT0086970003
Normal
-0.2
CPT0066480003
Tumor
-0.2
CPT0010160003
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0006730001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0089020003
Tumor
-0.2
CPT0088920001
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0025230003
Tumor
-0.2
CPT0077140001
Normal
-0.3
CPT0092800003
Normal
-0.3
CPT0086890003
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0089480003
Normal
-0.3
CPT0025060001
Normal
-0.3
CPT0006530001
Normal
-0.3
CPT0078510003
Tumor
-0.3
CPT0088480003
Tumor
-0.3
CPT0063640001
Normal
-0.3
CPT0078940001
Normal
-0.3
CPT0012920003
Normal
-0.3
CPT0075570001
Normal
-0.4
CPT0000790001
Normal
-0.4
CPT0025170003
Tumor
-0.4
CPT0082010001
Normal
-0.4
CPT0077320001
Normal
-0.4
CPT0086830003
Normal
-0.4
CPT0013790003
Normal
-0.4
CPT0012290003
Normal
-0.4
CPT0009080003
Normal
-0.4
CPT0007470001
Normal
-0.4
CPT0001550001
Normal
-0.4
CPT0006900003
Tumor
-0.4
CPT0076330003
Tumor
-0.4
CPT0088710001
Normal
-0.5
CPT0009020003
Normal
-0.5
CPT0078530001
Normal
-0.5
CPT0086370003
Normal
-0.5
CPT0089040001
Normal
-0.5
CPT0079000001
Normal
-0.5
CPT0087050003
Normal
-0.5
CPT0088760003
Tumor
-0.5
CPT0001270001
Normal
-0.5
CPT0020130001
Normal
-0.5
CPT0014470001
Normal
-0.5
CPT0014130001
Normal
-0.5
CPT0023690003
Tumor
-0.5
CPT0019160001
Normal
-0.5
CPT0063330001
Normal
-0.5
CPT0092310003
Normal
-0.5
CPT0092730003
Tumor
-0.5
CPT0002370001
Normal
-0.5
CPT0066520001
Normal
-0.5
CPT0077500001
Normal
-0.5
CPT0025580004
Tumor
-0.6
CPT0010120001
Normal
-0.6
CPT0020020001
Normal
-0.6
CPT0092740003
Normal
-0.6
CPT0025610001
Normal
-0.6
CPT0025920001
Normal
-0.6
CPT0066430001
Normal
-0.6
CPT0007870001
Normal
-0.6
CPT0088640003
Normal
-0.6
CPT0065820001
Normal
-0.6
CPT0023360001
Normal
-0.6
CPT0017450001
Normal
-0.6
CPT0012770003
Normal
-0.6
CPT0000660001
Normal
-0.6
CPT0064400001
Normal
-0.6
CPT0012090003
Normal
-0.6
CPT0001510001
Normal
-0.6
CPT0088570001
Normal
-0.6
CPT0069010001
Normal
-0.7
CPT0012180003
Tumor
-0.7
CPT0078670001
Normal
-0.7
CPT0079430001
Normal
-0.7
CPT0010170001
Normal
-0.7
CPT0024680001
Normal
-0.7
CPT0075170001
Normal
-0.7
CPT0081620001
Normal
-0.7
CPT0069190001
Normal
-0.8
CPT0088500001
Normal
-0.8
CPT0006950001
Normal
-0.8
CPT0065450001
Normal
-0.8
CPT0084590001
Normal
-0.8
CPT0063630003
Tumor
-0.9
CPT0012640003
Normal
-0.9
CPT0092190003
Normal
-0.9
CPT0023710001
Normal
-0.9
CPT0079510001
Normal
-0.9
CPT0001230001
Normal
-1.1
CPT0079300001
Normal
-1.1
CPT0084560003
Tumor
-1.2
CPT0079180003
Tumor
-1.3
CPT0001340003
Tumor
-1.5
CPT0088690003
Tumor
-1.5
CPT0012080003
Tumor
-1.6
CPT0088550004
Tumor
-1.6
CPT0078660003
Tumor
-2.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
