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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM176B is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1083.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
3080.6
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
3062.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
2836.9
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
2813.2
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
2613.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
2502.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
2467.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
2437.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
2426.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
2381.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
2379.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
2278.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
2277.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
2211.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
2178.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
2149.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
2100.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
2085.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
2073.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
2067.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
2063.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
2047.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
2047.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
2041.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
2028.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
2028.6
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
2022.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
1942.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
1936.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
1917.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
1912.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
1890.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
1875.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
1874.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
1873.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
1831.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
1802.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1797.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
1793.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
1770.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1758.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
1747.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
1737.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
1735.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1710.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
1705.8
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
1673.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
1669.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
1669.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
1668.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
1659.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
1647.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
1640.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1622.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
1621.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
1620.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
1614.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
1604.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
1601.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
1595.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
1562.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
1562.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
1553.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
1552.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
1537.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
1536.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
1512.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
1506.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
1497.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
1495.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
1493.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
1490.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
1484.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
1483.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
1477.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
1473.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
1471.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1470.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
1464.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
1461.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
1454.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
1453.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
1450.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
1446.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
1429.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
1427.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
1413.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
1412.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
1410.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1407.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
1402.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
1400.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
1393.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
1383.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
1369.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1363.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1352.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
1348.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
1331.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
1329.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
1328.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
1326.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1322.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
1322.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
1316.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
1315.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
1304.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
1301.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1301.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
1290.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
1285.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1283.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1280.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
1278.9
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
1276.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
1273.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
1272.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
1269.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
1267.8
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
1265.9
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
1258.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
1255.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
1254.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
1247.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
1244.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
1238.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1237.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
1235.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
1232.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
1232.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
1222.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
1221.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
1220.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
1219.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
1217.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
1213.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
1205.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
1203.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
1199.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
1197.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
1196.8
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
1192.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
1191.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
1188.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
1187.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
1184.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
1184.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
1179.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
1174.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
1171.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
1169.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
1169.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
1168.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
1161.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
1158.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
1155.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
1146.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1145.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
1139.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
1132.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
1125.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
1120.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
1119.9
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
1119.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
1109.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1106.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
1104.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
1103.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
1100.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
1099.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
1099.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
1092.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
1091.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
1091.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
1090.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
1086.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
1081.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
1080.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
1077.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
1077.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
1047.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
1044.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
1042.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
1042.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
1041.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
1040.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
1038.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
1027.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1026.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
1022.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
1020.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
1019.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
1019.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
1018.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
1013.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
1010.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
1009.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
1003.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
1000.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
997.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
996.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
994.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
993.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
992.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
988.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
984.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
981.7
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
973.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
969.7
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
969.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
952.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
948.2
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
942.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
935.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
934.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
932.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
926.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
923.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
923.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
923.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
922.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
915.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
914.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
913.4
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
911.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
890.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
881.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
881.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
873.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
873.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
867.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
857.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
857.2
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
849.9
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
849.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
848.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
848.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
845.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
841.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
838.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
823.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
823.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
823.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
816.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
810.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
804.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
794.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
788.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
787.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
783.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
782.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
778.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
767.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
766.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
764.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
764.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
752.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
747.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
742.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
740.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
737.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
736.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
735.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
726.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
718.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
717.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
713.6
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
699.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
688.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
684.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
682.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
681.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
680.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
664.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
654.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
653.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
651.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
647.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
640.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
640.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
637.9
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
628.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
626.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
622.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
618.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
617.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
614.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
611.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
606.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
594.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
589.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
586.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
583.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
578.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
564.9
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
558.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
553.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
549.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
548.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
548.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
540.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
536.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
531.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
531.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
526.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
516.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
513.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
497.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
475.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
473.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
467.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
460.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
442.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
433.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
430.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
422.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
418.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
416.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
415.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
413.6
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
411.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
411.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
406.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
400.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
390.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
390.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
385.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
385.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
385.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
384.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
380.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
370.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
368.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
357.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
343.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
334.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
328.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
328.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
320.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
256.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
254.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
241.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
238.3
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
226.5
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
226.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
207.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
205.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
204.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
165.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
143.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
142.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
135.2
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
118.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
111.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
95.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
75.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
57.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
24.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
19.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
18.4
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
7.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM176B is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
794.1
Number of samples
231
Samples
Sample
Description
TPM
DO45201
0 years, male, NA, stage:1, alive, 900 days
3070.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
2588.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
2434.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
2285.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
2126.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
2095.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
2049.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
1987.0
DO45119
0 years, male, NA, stage:3, dead, 510 days
1984.7
DO50804
0 years, male, NA, stage:2, alive, 720 days
1801.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
1769.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
1696.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
1670.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
1613.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
1546.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
1538.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
1523.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
1479.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
1454.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
1429.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
1415.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
1398.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
1389.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
1382.0
DO48679
0 years, male, NA, stage:2, alive, 1200 days
1359.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
1287.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
1251.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
1241.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
1239.6
DO23527
0 years, male, NA, stage:1, alive, 1050 days
1227.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
1225.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
1187.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
1180.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
1180.7
DO48706
0 years, male, NA, stage:2, alive, 870 days
1179.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
1177.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
1168.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
1157.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
1156.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
1149.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
1147.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
1128.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
1111.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
1110.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
1105.0
DO48759
0 years, male, NA, stage:3, alive, 720 days
1097.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
1086.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
1083.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
1067.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
1065.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
1063.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
1062.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
1054.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
1017.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
1017.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
1016.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
1011.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
1002.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
1001.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
1000.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
994.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
984.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
983.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
982.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
977.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
973.3
DO50808
0 years, male, NA, stage:2, alive, 570 days
972.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
970.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
969.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
965.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
956.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
951.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
946.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
943.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
926.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
920.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
915.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
913.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
910.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
902.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
897.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
888.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
880.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
880.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
868.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
851.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
844.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
836.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
833.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
833.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
831.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
830.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
830.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
826.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
816.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
805.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
802.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
801.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
794.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
784.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
780.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
778.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
765.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
757.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
753.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
752.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
751.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
748.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
743.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
737.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
737.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
729.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
723.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
722.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
719.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
711.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
705.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
703.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
689.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
685.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
684.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
681.0
DO23524
0 years, female, NA, stage:2, alive, 1050 days
677.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
677.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
669.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
663.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
661.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
659.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
658.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
655.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
653.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
651.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
645.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
644.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
640.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
636.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
635.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
634.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
630.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
630.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
630.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
628.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
627.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
626.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
619.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
616.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
616.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
616.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
612.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
611.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
605.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
599.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
598.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
596.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
580.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
579.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
577.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
577.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
571.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
558.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
558.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
555.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
550.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
535.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
531.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
524.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
524.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
521.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
520.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
516.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
507.7
DO50845
0 years, male, NA, stage:3, alive, 210 days
507.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
500.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
500.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
486.3
DO45205
0 years, female, NA, stage:2, dead, 90 days
481.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
478.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
477.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
477.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
473.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
467.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
464.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
452.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
449.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
447.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
427.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
408.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
405.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
401.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
400.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
397.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
386.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
379.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
371.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
368.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
365.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
365.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
364.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
351.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
332.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
328.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
318.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
313.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
300.1
DO45251
0 years, female, NA, stage:2, alive, 900 days
272.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
271.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
267.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
248.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
244.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
238.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
237.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
233.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
224.6
DO45253
0 years, male, NA, stage:2, alive, 870 days
222.3
DO45249
0 years, male, NA, stage:1, alive, 630 days
221.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
205.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
192.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
176.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
136.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
106.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
91.4
DO45301
0 years, male, NA, stage:2, dead, 1440 days
76.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
65.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
61.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
55.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
33.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
32.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
24.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
23.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
10.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
8.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
187
Tumor
1.6
425
Tumor
1.3
393
Tumor
1.2
755
Tumor
1.2
573
Tumor
1.2
223
Tumor
1.1
665
Tumor
1.1
697
Tumor
1.0
343
Tumor
1.0
493
Tumor
0.9
137
Tumor
0.9
135
Tumor
0.8
861
Tumor
0.8
745
Tumor
0.8
863
Tumor
0.8
191
Tumor
0.8
445
Tumor
0.8
713
Tumor
0.8
481
Tumor
0.7
271
Tumor
0.7
823
Tumor
0.6
1025
Tumor
0.6
635
Tumor
0.6
777
Tumor
0.5
195
Tumor
0.5
213
Tumor
0.5
471
Tumor
0.5
483
Tumor
0.5
467
Tumor
0.5
1041
Tumor
0.5
647
Tumor
0.5
147
Tumor
0.5
145
Tumor
0.5
785
Tumor
0.5
977
Tumor
0.4
1045
Tumor
0.4
616
Normal
0.4
642
Normal
0.4
221
Tumor
0.4
257
Tumor
0.4
1015
Tumor
0.4
365
Tumor
0.4
545
Tumor
0.4
913
Tumor
0.4
227
Tumor
0.4
615
Tumor
0.4
553
Tumor
0.4
937
Tumor
0.4
218
Normal
0.3
873
Tumor
0.3
618
Normal
0.3
387
Tumor
0.3
455
Tumor
0.3
368
Normal
0.3
361
Tumor
0.3
721
Tumor
0.3
533
Tumor
0.3
222
Normal
0.3
628
Normal
0.3
261
Tumor
0.3
327
Tumor
0.3
641
Tumor
0.3
428
Normal
0.3
388
Normal
0.3
217
Tumor
0.3
867
Tumor
0.3
436
Normal
0.3
267
Tumor
0.3
943
Tumor
0.3
392
Normal
0.3
563
Tumor
0.3
231
Tumor
0.3
421
Tumor
0.2
636
Normal
0.2
431
Tumor
0.2
142
Normal
0.2
353
Tumor
0.2
366
Normal
0.2
515
Tumor
0.2
737
Tumor
0.2
413
Tumor
0.2
883
Tumor
0.2
375
Tumor
0.2
426
Normal
0.2
394
Normal
0.2
865
Tumor
0.2
557
Tumor
0.2
396
Normal
0.2
648
Normal
0.2
424
Normal
0.2
517
Tumor
0.2
136
Normal
0.2
1021
Tumor
0.2
617
Tumor
0.2
963
Tumor
0.2
114
Normal
0.2
214
Normal
0.2
196
Normal
0.2
132
Normal
0.2
472
Normal
0.2
574
Normal
0.2
433
Tumor
0.2
527
Tumor
0.2
477
Tumor
0.2
422
Normal
0.2
715
Tumor
0.2
571
Tumor
0.2
1043
Tumor
0.2
171
Tumor
0.1
975
Tumor
0.1
915
Tumor
0.1
526
Normal
0.1
443
Tumor
0.1
724
Normal
0.1
446
Normal
0.1
564
Normal
0.1
568
Normal
0.1
482
Normal
0.1
384
Normal
0.1
862
Normal
0.1
423
Tumor
0.1
546
Normal
0.1
955
Tumor
0.1
138
Normal
0.1
666
Normal
0.1
627
Tumor
0.1
474
Normal
0.1
376
Normal
0.1
462
Normal
0.1
756
Normal
0.1
662
Normal
0.1
185
Tumor
0.1
1016
Normal
0.1
528
Normal
0.1
857
Tumor
0.1
113
Tumor
0.1
882
Normal
0.0
411
Tumor
0.0
746
Normal
0.0
1027
Tumor
0.0
664
Normal
0.0
357
Tumor
0.0
125
Tumor
0.0
686
Normal
0.0
554
Normal
0.0
911
Tumor
0.0
111
Normal
0.0
497
Tumor
0.0
868
Normal
0.0
228
Normal
0.0
448
Normal
0.0
342
Normal
0.0
352
Normal
0.0
452
Normal
0.0
414
Normal
0.0
362
Normal
0.0
518
Normal
0.0
951
Tumor
0.0
851
Tumor
0.0
432
Normal
0.0
981
Tumor
0.0
232
Normal
0.0
964
Normal
0.0
277
Tumor
0.0
461
Tumor
0.0
534
Normal
0.0
816
Normal
0.0
344
Normal
0.0
456
Normal
0.0
881
Tumor
0.0
391
Tumor
0.0
786
Normal
0.0
466
Normal
0.0
435
Tumor
0.0
884
Normal
0.0
127
Tumor
0.0
364
Normal
0.0
434
Normal
0.0
146
Normal
0.0
478
Normal
0.0
284
Normal
-0.1
141
Tumor
-0.1
427
Tumor
-0.1
874
Normal
-0.1
415
Tumor
-0.1
386
Normal
-0.1
463
Tumor
-0.1
126
Normal
-0.1
714
Normal
-0.1
953
Tumor
-0.1
538
Normal
-0.1
358
Normal
-0.1
286
Normal
-0.1
572
Normal
-0.1
523
Tumor
-0.1
416
Normal
-0.1
866
Normal
-0.1
672
Normal
-0.1
356
Normal
-0.1
224
Normal
-0.1
278
Normal
-0.1
128
Normal
-0.1
558
Normal
-0.1
698
Normal
-0.1
738
Normal
-0.1
412
Normal
-0.1
954
Normal
-0.1
487
Tumor
-0.1
864
Normal
-0.1
716
Normal
-0.1
924
Normal
-0.1
468
Normal
-0.1
824
Normal
-0.1
914
Normal
-0.1
741
Tumor
-0.1
524
Normal
-0.1
742
Normal
-0.1
952
Normal
-0.1
1026
Normal
-0.1
696
Normal
-0.1
723
Tumor
-0.1
818
Normal
-0.1
858
Normal
-0.1
968
Normal
-0.1
722
Normal
-0.1
354
Normal
-0.1
923
Tumor
-0.1
212
Normal
-0.1
778
Normal
-0.1
661
Tumor
-0.2
395
Tumor
-0.2
938
Normal
-0.2
148
Normal
-0.2
1028
Normal
-0.2
464
Normal
-0.2
494
Normal
-0.2
484
Normal
-0.2
112
Tumor
-0.2
186
Normal
-0.2
1044
Normal
-0.2
1046
Normal
-0.2
328
Normal
-0.2
567
Tumor
-0.2
124
Normal
-0.2
1042
Normal
-0.2
956
Normal
-0.2
922
Normal
-0.2
444
Normal
-0.2
123
Tumor
-0.2
878
Normal
-0.2
728
Normal
-0.2
918
Normal
-0.2
852
Normal
-0.2
488
Normal
-0.2
958
Normal
-0.2
314
Normal
-0.2
192
Normal
-0.2
172
Normal
-0.3
313
Tumor
-0.3
912
Normal
-0.3
355
Tumor
-0.3
262
Normal
-0.3
341
Tumor
-0.3
976
Normal
-0.3
743
Tumor
-0.3
298
Normal
-0.3
332
Normal
-0.3
312
Normal
-0.3
162
Normal
-0.3
982
Normal
-0.3
1022
Normal
-0.3
926
Normal
-0.3
451
Tumor
-0.3
161
Tumor
-0.3
695
Tumor
-0.3
272
Normal
-0.3
258
Normal
-0.3
513
Tumor
-0.3
514
Normal
-0.3
188
Normal
-0.3
966
Normal
-0.3
957
Tumor
-0.4
984
Normal
-0.4
1013
Tumor
-0.4
916
Normal
-0.4
525
Tumor
-0.4
744
Normal
-0.4
297
Tumor
-0.4
671
Tumor
-0.4
498
Normal
-0.4
268
Normal
-0.4
535
Tumor
-0.4
536
Normal
-0.4
917
Tumor
-0.4
131
Tumor
-0.4
978
Normal
-0.5
944
Normal
-0.5
1014
Normal
-0.5
817
Tumor
-0.5
663
Tumor
-0.5
1032
Normal
-0.5
516
Normal
-0.5
385
Tumor
-0.5
473
Tumor
-0.5
1031
Tumor
-0.5
921
Tumor
-0.5
727
Tumor
-0.5
351
Tumor
-0.5
537
Tumor
-0.6
447
Tumor
-0.6
983
Tumor
-0.6
877
Tumor
-0.6
465
Tumor
-0.6
491
Tumor
-0.6
492
Normal
-0.6
814
Normal
-0.7
311
Tumor
-0.7
685
Tumor
-0.7
925
Tumor
-0.8
367
Tumor
-0.8
283
Tumor
-0.8
285
Tumor
-0.8
383
Tumor
-0.8
967
Tumor
-0.8
813
Tumor
-0.9
331
Tumor
-1.0
815
Tumor
-1.0
965
Tumor
-1.1
211
Tumor
-1.4
363
Tumor
-1.7
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.