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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TSPAN13 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
33.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
28.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
28.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
27.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
26.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
26.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
23.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
23.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
21.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
20.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
20.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
20.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
19.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
18.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
18.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
18.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
17.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
16.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
16.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
15.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
14.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
14.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
14.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
13.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
13.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
12.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
12.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
12.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
12.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
11.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
10.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
10.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
10.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
10.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
10.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
10.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
9.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
9.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
9.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
9.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
9.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
9.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
8.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
8.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
8.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
7.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
7.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
7.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
7.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
6.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
6.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
5.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
5.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
5.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
5.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
4.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
3.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
3.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
2.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
1.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
1.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TSPAN13 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
209.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
200.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
177.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
119.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
105.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
91.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
84.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
77.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
68.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
60.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
60.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
58.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
58.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
56.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
54.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
54.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
53.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
53.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
53.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
52.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
50.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
50.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
50.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
49.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
49.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
48.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
47.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
47.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
47.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
47.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
46.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
45.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
45.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
45.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
45.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
44.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
44.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
44.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
43.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
42.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
42.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
41.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
40.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
40.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
40.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
40.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
39.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
39.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
39.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
39.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
39.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
39.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
38.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
38.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
37.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
37.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
37.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
36.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
36.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
35.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
35.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
35.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
35.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
35.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
35.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
35.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
34.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
34.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
34.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
34.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
34.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
34.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
33.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
33.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
32.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
32.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
32.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
32.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
31.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
31.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
30.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
30.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
30.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
30.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
30.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
30.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
30.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
30.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
30.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
30.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
29.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
29.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
29.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
29.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
29.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
29.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
29.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
29.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
29.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
29.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
29.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
29.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
28.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
28.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
28.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
28.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
27.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
27.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
27.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
27.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
27.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
27.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
27.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
26.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
26.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
26.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
26.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
26.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
26.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
26.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
26.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
25.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
25.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
25.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
25.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
25.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
25.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
25.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
25.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
25.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
25.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
24.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
24.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
24.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
24.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
24.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
24.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
24.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
24.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
23.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
23.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
23.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
23.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
23.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
23.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
23.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
23.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
23.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
23.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
22.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
22.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
22.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
22.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
22.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
22.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
22.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
22.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
21.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
21.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
21.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
21.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
21.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
21.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
21.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
21.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
21.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
21.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
20.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
20.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
20.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
20.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
20.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
20.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
20.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
20.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
20.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
20.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
20.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
20.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
20.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
20.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
20.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
20.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
20.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
20.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
19.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
19.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
19.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
19.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
19.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
19.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
19.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
19.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
19.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
19.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
19.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
19.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
19.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
19.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
19.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
18.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
18.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
18.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
18.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
18.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
18.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
18.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
18.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
18.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
18.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
18.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
18.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
18.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
18.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
18.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
17.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
17.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
17.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
17.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
17.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
17.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
17.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
17.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
17.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
17.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
17.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
17.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
17.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
17.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
17.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
17.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
17.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
16.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
16.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
16.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
16.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
16.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
16.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
16.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
16.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
16.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
16.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
16.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
16.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
15.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
15.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
15.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
15.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
15.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
15.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
15.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
15.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
15.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
15.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
15.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
15.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
15.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
15.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
15.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
15.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
15.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
15.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
15.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
14.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
14.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
14.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
14.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
14.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
14.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
14.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
14.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
14.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
14.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
14.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
14.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
14.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
14.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
14.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
14.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
14.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
13.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
13.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
13.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
13.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
13.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
13.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
13.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
13.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
13.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
13.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
13.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
13.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
13.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
13.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
13.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
13.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
13.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
13.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
13.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
12.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
12.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
12.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
12.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
12.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
12.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
12.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
12.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
12.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
12.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
12.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
12.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
12.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
12.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
12.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
12.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
12.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
12.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
12.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
12.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
12.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
11.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
11.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
11.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
11.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
11.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
11.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
11.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
11.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
11.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
11.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
11.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
11.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
11.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
11.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
11.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
11.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
11.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
11.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
11.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
11.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
11.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
11.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
11.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
11.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
10.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
10.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
10.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
10.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
10.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
10.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
10.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
10.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
10.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
10.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
10.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
10.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
10.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
10.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
10.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
10.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
10.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
9.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
9.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
9.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
9.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
9.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
9.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
9.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
9.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
9.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
9.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
9.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
9.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
9.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
9.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
9.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
9.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
9.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
9.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
9.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
9.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
8.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
8.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
8.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
8.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
8.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
8.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
8.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
8.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
8.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
8.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
8.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
8.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
8.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
8.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
8.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
8.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
8.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
8.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
8.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
8.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
8.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
8.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
8.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
8.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
8.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
8.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
8.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
8.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
8.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
8.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
8.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
8.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
8.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
7.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
7.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
7.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
7.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
7.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
7.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
7.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
7.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
7.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
7.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
7.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
7.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
7.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
7.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
6.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
6.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
6.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
6.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
6.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
6.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
6.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
6.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
6.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
6.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
6.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
6.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
6.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
6.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
6.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
6.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
6.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
5.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
5.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
5.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
5.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
5.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
5.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
5.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
5.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
5.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
5.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
5.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
5.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
5.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
5.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
5.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
5.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
5.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
5.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
5.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
4.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
4.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
4.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
4.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
4.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
4.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
4.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
4.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
4.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
4.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
4.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
4.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
4.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
4.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
4.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
4.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
4.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
4.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
4.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
4.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
3.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
3.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
3.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
3.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
3.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
3.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
3.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
3.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
3.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
3.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
3.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
2.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
2.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
2.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
2.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
2.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
2.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
1.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
1.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TSPAN13 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
112.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
61.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
60.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
58.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
50.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
47.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
45.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
44.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
44.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
43.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
43.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
43.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
42.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
42.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
38.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
33.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
33.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
32.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
32.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
31.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
31.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
30.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
30.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
29.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
29.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
28.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
28.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
28.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
27.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
26.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
26.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
25.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
24.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
24.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
23.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
23.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
23.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
23.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
22.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
22.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
21.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
20.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
20.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
20.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
19.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
19.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
19.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
19.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
18.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
18.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
17.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
17.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
17.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
17.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
17.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
16.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
16.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
15.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
15.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
15.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
15.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
14.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
14.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
13.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
13.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
13.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
13.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
13.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
13.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
12.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
11.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
11.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
11.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
11.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
10.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
10.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
10.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
10.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
10.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
10.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
9.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
9.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
9.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
8.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
8.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
7.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
7.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
7.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
6.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
6.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
6.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
6.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
6.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
5.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
4.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
4.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
2.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
2.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TSPAN13 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
210.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
127.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
63.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
59.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
57.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
42.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
34.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
31.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
29.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
28.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
27.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
27.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
26.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
25.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
24.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
24.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
24.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
23.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
22.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
21.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
19.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
19.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
18.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
18.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
18.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
18.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
18.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
18.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
17.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
17.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
17.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
16.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
16.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
16.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
16.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
16.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
16.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
16.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
15.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
15.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
15.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
14.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
14.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
14.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
13.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
13.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
13.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
13.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
13.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
13.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
12.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
12.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
12.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
12.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
12.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
12.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
12.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
11.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
11.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
11.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
11.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
11.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
11.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
11.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
11.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
11.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
11.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
11.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
10.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
10.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
10.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
10.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
10.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
10.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
10.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
9.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
9.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
9.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
9.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
9.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
9.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
9.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
9.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
9.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
9.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
9.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
8.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
8.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
8.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
8.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
8.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
8.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
8.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
8.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
8.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
8.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
8.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
8.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
7.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
7.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
7.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
7.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
7.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
7.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
7.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
7.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
7.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
7.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
7.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
6.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
6.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
6.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
6.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
6.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
6.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
6.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
6.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
6.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
6.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
6.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
6.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
6.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
6.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
6.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
6.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
6.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
6.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
6.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
6.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
6.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
5.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
5.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
5.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
5.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
5.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
5.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
5.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
5.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
5.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
5.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
5.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
5.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
5.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
5.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
4.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
4.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
4.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
4.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
4.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
4.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
4.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
4.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
4.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
4.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
4.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
4.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
4.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
4.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
4.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
4.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
4.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
4.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
4.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
4.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
4.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
4.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
4.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
4.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
4.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
3.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
3.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
3.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
3.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
3.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
3.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
3.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
3.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
3.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
3.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
3.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
3.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
3.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
3.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
3.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
3.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
3.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
3.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
3.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
3.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
3.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
3.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
3.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
3.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
3.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
3.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
3.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
2.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
2.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
2.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
2.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
2.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
2.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
2.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
2.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
2.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
2.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
2.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
2.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
2.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
2.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
2.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
2.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
2.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
2.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
2.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
2.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
2.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
2.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
2.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
2.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
2.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
2.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
2.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
2.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
2.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
2.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
1.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
1.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
1.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
1.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
1.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
1.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
1.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
1.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
1.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
1.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
1.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
1.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
1.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
1.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
1.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
1.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
1.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
1.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
1.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
1.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
1.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
1.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
1.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
1.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
1.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
1.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
1.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
1.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
0.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
0.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
0.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
0.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
0.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0076330003
Tumor
2.3
CPT0023350003
Tumor
2.0
CPT0078660003
Tumor
1.1
CPT0001260009
Tumor
1.1
CPT0086950003
Tumor
1.0
CPT0075130003
Tumor
1.0
CPT0079180003
Tumor
0.8
CPT0025350003
Tumor
0.7
CPT0063630003
Tumor
0.7
CPT0001180009
Tumor
0.6
CPT0010160003
Tumor
0.6
CPT0081880003
Tumor
0.6
CPT0088550004
Tumor
0.6
CPT0011410003
Tumor
0.5
CPT0012370003
Tumor
0.5
CPT0002350011
Tumor
0.5
CPT0000640003
Tumor
0.5
CPT0012180003
Tumor
0.5
CPT0086820003
Tumor
0.4
CPT0071150004
Tumor
0.4
CPT0075170001
Normal
0.4
CPT0010120001
Normal
0.4
CPT0079230003
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0014450004
Tumor
0.4
CPT0077490003
Tumor
0.4
CPT0001340003
Tumor
0.3
CPT0077320001
Normal
0.3
CPT0079410003
Tumor
0.3
CPT0006440003
Tumor
0.3
CPT0081600003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0012550003
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0078940001
Normal
0.1
CPT0088900003
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0089480003
Normal
0.1
CPT0079510001
Normal
0.1
CPT0065430003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0079430001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0012080003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0002370001
Normal
0.0
CPT0079270003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0078510003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0088570001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0025110003
Tumor
0.0
CPT0088780001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0078800003
Tumor
-0.1
CPT0088480003
Tumor
-0.1
CPT0025230003
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0078990003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0012280003
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0077500001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0025050003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0006530001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0078840001
Normal
-0.1
CPT0086370003
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0085670003
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0014130001
Normal
-0.2
CPT0069160003
Tumor
-0.2
CPT0066520001
Normal
-0.2
CPT0086360003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0010170001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0075560003
Tumor
-0.2
CPT0012290003
Normal
-0.2
CPT0000890001
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0066480003
Tumor
-0.2
CPT0013790003
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0001350001
Normal
-0.2
CPT0020120003
Tumor
-0.2
CPT0069010001
Normal
-0.3
CPT0025290003
Tumor
-0.3
CPT0015810003
Tumor
-0.3
CPT0017850003
Tumor
-0.3
CPT0088920001
Normal
-0.3
CPT0089040001
Normal
-0.3
CPT0087040003
Tumor
-0.3
CPT0025060001
Normal
-0.3
CPT0007320003
Tumor
-0.3
CPT0092310003
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0001230001
Normal
-0.3
CPT0064400001
Normal
-0.3
CPT0025880003
Tumor
-0.3
CPT0025610001
Normal
-0.3
CPT0079000001
Normal
-0.3
CPT0092740003
Normal
-0.3
CPT0015910003
Tumor
-0.3
CPT0089460004
Tumor
-0.4
CPT0014350001
Normal
-0.4
CPT0026420001
Normal
-0.4
CPT0081990003
Tumor
-0.4
CPT0012670003
Tumor
-0.4
CPT0025920001
Normal
-0.4
CPT0023690003
Tumor
-0.4
CPT0078930003
Tumor
-0.4
CPT0012090003
Normal
-0.4
CPT0012570003
Normal
-0.4
CPT0018250001
Normal
-0.4
CPT0076350001
Normal
-0.5
CPT0000790001
Normal
-0.5
CPT0065810003
Tumor
-0.5
CPT0020020001
Normal
-0.5
CPT0012640003
Normal
-0.5
CPT0078670001
Normal
-0.5
CPT0065450001
Normal
-0.5
CPT0023360001
Normal
-0.5
CPT0082010001
Normal
-0.5
CPT0024670003
Tumor
-0.5
CPT0014470001
Normal
-0.6
CPT0012770003
Normal
-0.6
CPT0026410003
Tumor
-0.6
CPT0077140001
Normal
-0.6
CPT0006730001
Normal
-0.6
CPT0014160003
Tumor
-0.7
CPT0079380003
Tumor
-0.7
CPT0001510001
Normal
-0.8
CPT0075570001
Normal
-0.8
CPT0011240003
Tumor
-0.8
CPT0077110003
Tumor
-0.8
CPT0088970003
Tumor
-0.8
CPT0015730003
Tumor
-0.9
CPT0065930003
Tumor
-0.9
CPT0064370003
Tumor
-0.9
CPT0020130001
Normal
-0.9
CPT0007870001
Normal
-0.9
CPT0025170003
Tumor
-1.0
CPT0024680001
Normal
-1.0
CPT0065750003
Tumor
-1.0
CPT0092290003
Tumor
-1.1
CPT0086030003
Tumor
-1.1
CPT0006630003
Tumor
-1.2
CPT0006900003
Tumor
-1.2
CPT0007860003
Tumor
-1.6
CPT0012920003
Normal
N/A
CPT0021240003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0009000003
Tumor
N/A
CPT0009020003
Normal
N/A
CPT0017410003
Tumor
N/A
CPT0017450001
Normal
N/A
CPT0009080003
Normal
N/A
CPT0009060003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.