HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:27.3 nTPM
HPA Brain:53.8 nTPM
GTEx:27.3 nTPM
FANTOM5:29.7 Scaled Tags Per Million
Pig:72.1 nTPM
Mouse:272.7 nTPM
Allen mouse:24.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007426
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 53.8
Sample id Sample description nTPM
Hippocampus
nTPM: 27.8
1898 Male, age 80, left hemisphere 49.6
1855 Male, age 76, left hemisphere 32.9
2621 Female, age 67, right hemisphere 26.1
1911 Female, age 85, right hemisphere 20.8
2148 Female, age 91, left hemisphere 20.0
2529 Female, age 94, left hemisphere 17.3
Dentate gyrus
nTPM: 28.6
1927 Female, age 91, both hemispheres 46.0
2010 Male, age 76, both hemispheres 37.6
2246 Female, age 85, both hemispheres 24.9
2530 Female, age 94, left hemisphere 22.5
2528 Male, age 74, both hemispheres 20.4
2531 Female, age 67, both hemispheres 19.9
Entorhinal gyrus
nTPM: 30.7
1938 Female, age 85, left hemisphere 40.7
2613 Female, age 94, left hemisphere 37.4
2764 Male, age 80, right hemisphere 35.6
1787 Male, age 76, left hemisphere 28.7
2686 Male, age 75, right hemisphere 24.0
2117 Female, age 91, right hemisphere 17.8
Hippocampus, CA1
nTPM: 37.8
2749 Male, age 80, left hemisphere 63.6
2045 Male, age 76, both hemispheres 42.5
1873 Female, age 85, both hemispheres 33.2
2082 Female, age 91, right hemisphere 25.4
2527 Male, age 74, both hemispheres 24.1
Hippocampus, CA2
nTPM: 33.0
1963 Male, age 80, left hemisphere 49.0
1892 Male, age 76, both hemispheres 44.6
1940 Female, age 85, left hemisphere 32.3
2437 Female, age 94, left hemisphere 25.1
2249 Male, age 74, both hemispheres 23.7
2113 Female, age 91, right hemisphere 23.2
Hippocampus, CA3
nTPM: 31.3
2137 Male, age 80, left hemisphere 48.9
1867 Male, age 76, both hemispheres 39.5
2436 Male, age 74, both hemispheres 28.1
2620 Female, age 94, left hemisphere 26.3
1891 Female, age 85, both hemispheres 23.4
2861 Female, age 67, both hemispheres 21.6
Parahippocampal cortex
nTPM: 37.6
1850 Male, age 80, both hemispheres 52.0
2693 Female, age 94, both hemispheres 45.9
2250 Female, age 67, right hemisphere 45.7
1990 Female, age 91, right hemisphere 41.4
2245 Female, age 91, both hemispheres 38.7
1933 Female, age 85, both hemispheres 36.9
2532 Female, age 72, left hemisphere 35.8
2622 Female, age 67, right hemisphere 29.3
2018 Male, age 76, both hemispheres 28.0
2692 Male, age 74, both hemispheres 22.0
Perirhinal gyrus
nTPM: 53.8
1841 Female, age 85, right hemisphere 61.7
1847 Female, age 91, left hemisphere 58.8
2521 Female, age 94, right hemisphere 54.6
1794 Male, age 80, right hemisphere 54.4
2848 Male, age 76, right hemisphere 39.6
Subiculum
nTPM: 23.3
1901 Male, age 80, both hemispheres 32.5
1977 Female, age 85, both hemispheres 32.5
2438 Female, age 94, left hemisphere 20.8
2042 Male, age 76, both hemispheres 19.3
2729 Female, age 91, right hemisphere 18.1
2619 Male, age 74, both hemispheres 16.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 27.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.3
Samples: 197

Max nTPM: 106.7
Min nTPM: 2.7
Std nTPM: 17.6
Median nTPM: 24.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 106.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 95.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 83.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 70.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 65.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 65.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 64.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 59.8
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 59.7
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 59.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 58.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 29.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.7
FF:10169-103B7 60 years, female 35.3
FF:10153-102I9 76 years, female 24.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 72.1
Pig sample Sample description nTPM
Subiculum
nTPM: 60.0
Samples: 4

Max nTPM: 75.2
Min nTPM: 51.8
Sample A Female 75.2
Sample B Female 57.7
Sample C Male 51.8
Sample D Male 55.4
Dorsal hippocampus
nTPM: 46.5
Samples: 4

Max nTPM: 56.1
Min nTPM: 39.8
Sample A Female 56.1
Sample B Female 48.7
Sample C Male 41.2
Sample D Male 39.8
Entorhinal cortex
nTPM: 72.1
Samples: 4

Max nTPM: 85.7
Min nTPM: 61.2
Sample A Female 70.7
Sample B Female 85.7
Sample C Male 70.9
Sample D Male 61.2
Ventral hippocampus
nTPM: 45.1
Samples: 4

Max nTPM: 47.8
Min nTPM: 40.3
Sample A Female 47.8
Sample B Female 40.3
Sample C Male 47.7
Sample D Male 44.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 272.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 209.8
Samples: 4

Max nTPM: 236.5
Min nTPM: 187.2
Sample A Male 187.2
Sample B Male 193.5
Sample C Female 236.5
Sample D Female 222.1
Hippocampal formation
nTPM: 272.7
Samples: 4

Max nTPM: 287.9
Min nTPM: 246.1
Sample A Male 278.5
Sample B Male 287.9
Sample C Female 278.4
Sample D Female 246.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 24.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 24.5
576435 Antisense, RP_040826_01_H11, Mouse strain C57BL/6J (56 days, male) 29.9
81599660 Antisense, RP_071213_04_B05, Mouse strain C57BL/6J (56 days, male) 19.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org