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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZNHIT1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
245.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1699.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
936.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
661.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
575.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
564.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
508.9
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
497.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
480.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
476.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
469.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
464.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
456.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
453.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
428.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
426.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
424.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
419.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
418.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
413.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
412.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
412.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
411.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
404.4
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
400.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
398.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
392.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
392.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
385.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
383.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
379.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
379.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
379.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
376.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
373.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
370.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
370.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
365.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
365.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
364.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
361.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
360.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
353.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
351.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
350.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
349.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
344.6
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
343.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
342.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
342.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
342.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
341.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
340.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
338.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
335.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
334.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
334.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
333.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
331.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
331.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
330.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
327.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
325.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
325.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
325.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
324.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
324.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
322.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
321.7
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
321.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
319.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
319.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
316.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
314.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
313.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
312.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
310.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
309.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
309.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
309.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
308.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
305.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
304.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
304.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
304.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
302.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
301.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
300.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
299.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
299.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
297.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
297.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
295.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
295.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
294.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
294.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
290.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
290.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
290.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
287.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
286.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
286.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
285.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
284.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
284.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
283.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
282.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
281.6
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
281.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
278.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
277.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
277.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
277.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
276.7
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
276.0
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
274.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
274.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
272.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
272.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
271.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
270.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
265.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
264.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
263.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
263.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
261.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
258.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
258.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
258.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
258.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
258.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
257.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
256.9
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
254.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
254.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
252.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
252.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
252.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
251.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
250.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
250.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
248.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
247.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
247.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
246.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
245.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
244.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
242.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
242.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
240.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
239.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
238.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
238.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
238.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
237.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
237.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
235.5
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
235.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
234.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
233.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
233.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
232.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
231.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
231.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
231.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
231.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
231.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
230.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
230.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
230.1
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
230.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
229.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
228.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
227.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
227.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
226.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
225.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
224.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
223.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
223.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
221.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
220.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
219.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
219.2
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
218.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
218.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
217.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
217.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
215.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
215.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
215.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
214.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
214.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
214.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
213.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
213.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
213.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
213.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
213.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
213.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
210.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
210.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
210.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
209.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
208.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
206.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
204.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
204.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
204.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
203.4
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
203.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
203.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
200.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
199.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
199.5
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
198.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
198.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
198.1
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
197.4
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
197.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
196.7
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
196.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
195.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
195.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
195.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
195.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
195.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
194.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
194.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
193.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
192.4
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
191.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
191.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
191.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
189.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
188.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
188.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
188.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
188.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
188.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
187.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
187.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
185.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
185.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
185.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
185.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
184.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
184.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
183.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
182.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
182.7
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
182.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
182.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
181.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
181.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
181.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
181.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
181.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
180.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
179.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
179.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
178.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
178.0
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
177.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
177.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
177.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
177.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
177.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
177.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
176.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
175.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
175.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
175.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
175.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
175.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
174.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
174.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
174.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
174.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
173.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
173.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
172.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
172.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
170.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
170.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
169.7
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
169.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
168.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
168.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
168.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
168.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
168.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
167.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
166.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
165.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
165.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
165.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
164.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
163.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
162.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
162.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
160.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
160.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
160.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
160.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
159.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
158.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
157.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
154.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
153.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
153.3
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
149.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
147.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
146.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
146.4
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
145.8
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
145.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
144.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
143.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
143.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
142.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
142.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
140.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
140.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
139.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
139.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
138.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
136.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
136.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
136.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
136.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
133.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
131.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
130.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
129.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
128.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
128.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
128.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
125.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
124.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
122.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
120.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
119.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
118.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
118.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
116.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
115.9
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
114.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
113.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
112.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
112.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
112.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
111.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
109.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
106.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
106.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
102.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
101.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
101.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
98.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
91.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
75.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZNHIT1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
104.6
Number of samples
231
Samples
Sample
Description
TPM
DO50839
0 years, female, NA, stage:3, alive, 330 days
871.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
400.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
391.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
323.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
299.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
295.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
259.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
254.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
238.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
225.9
DO45101
0 years, male, NA, stage:2, alive, 1680 days
220.3
DO50798
0 years, male, NA, stage:3, dead, 30 days
211.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
211.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
207.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
205.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
203.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
195.9
DO45125
0 years, male, NA, stage:3, alive, 1680 days
188.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
176.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
173.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
172.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
171.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
167.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
167.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
163.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
159.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
159.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
157.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
149.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
148.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
148.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
147.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
147.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
146.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
145.7
DO45307
0 years, female, NA, stage:4, dead, 240 days
145.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
144.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
143.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
143.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
141.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
140.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
140.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
139.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
138.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
137.8
DO23516
0 years, male, NA, stage:3, dead, 20 days
136.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
134.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
133.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
132.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
131.0
DO23543
0 years, male, NA, stage:2, alive, 1020 days
130.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
129.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
129.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
128.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
127.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
127.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
127.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
126.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
126.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
126.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
122.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
120.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
119.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
118.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
118.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
118.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
117.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
116.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
116.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
115.9
DO45103
0 years, male, NA, stage:3, alive, 450 days
114.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
113.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
112.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
111.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
111.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
111.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
111.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
110.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
110.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
110.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
109.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
109.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
109.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
108.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
107.7
DO50855
0 years, male, NA, stage:2, alive, 570 days
106.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
106.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
105.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
102.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
102.5
DO50832
0 years, male, NA, stage:3, alive, 90 days
101.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
98.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
98.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
98.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
97.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
96.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
96.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
96.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
95.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
95.7
DO50845
0 years, male, NA, stage:3, alive, 210 days
94.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
94.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
94.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
93.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
91.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
91.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
90.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
90.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
90.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
89.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
88.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
87.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
87.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
87.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
87.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
86.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
86.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
86.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
85.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
85.6
DO23528
0 years, female, NA, stage:2, alive, 1020 days
83.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
83.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
82.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
82.3
DO50799
0 years, female, NA, stage:2, alive, 540 days
82.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
82.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
81.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
81.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
80.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
80.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
80.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
80.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
80.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
79.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
79.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
79.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
79.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
77.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
77.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
75.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
74.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
74.8
DO23550
0 years, male, NA, stage:1, alive, 990 days
74.3
DO45099
0 years, male, NA, stage:3, alive, 1590 days
74.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
73.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
72.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
72.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
71.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
71.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
71.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
70.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
70.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
70.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
68.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
68.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
68.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
66.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
66.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
66.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
66.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
65.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
65.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
65.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
65.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
65.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
65.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
65.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
64.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
64.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
64.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
64.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
63.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
63.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
63.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
63.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
63.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
63.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
62.7
DO45253
0 years, male, NA, stage:2, alive, 870 days
62.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
61.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
61.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
61.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
61.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
59.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
58.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
58.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
58.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
58.0
DO50840
0 years, male, NA, stage:2, alive, 330 days
57.8
DO45237
0 years, male, NA, stage:2, alive, 900 days
57.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
57.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
56.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
56.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
55.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
55.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
55.8
DO45137
0 years, male, NA, stage:1, alive, 1320 days
54.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
53.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
52.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
52.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
52.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
52.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
52.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
51.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
50.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
50.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
50.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
49.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
48.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
46.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
46.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
46.1
DO45197
0 years, male, NA, stage:2, alive, 1170 days
46.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
45.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
44.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
44.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
42.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
42.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
41.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
41.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
39.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
39.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
38.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
37.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
37.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
34.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
33.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
32.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
30.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
30.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
29.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
965
Tumor
1.8
977
Tumor
1.2
425
Tumor
1.1
341
Tumor
1.1
915
Tumor
1.0
387
Tumor
0.9
967
Tumor
0.9
473
Tumor
0.9
957
Tumor
0.9
221
Tumor
0.9
865
Tumor
0.9
171
Tumor
0.8
1013
Tumor
0.8
925
Tumor
0.8
1015
Tumor
0.7
635
Tumor
0.7
477
Tumor
0.7
351
Tumor
0.6
217
Tumor
0.6
981
Tumor
0.6
481
Tumor
0.6
357
Tumor
0.6
641
Tumor
0.6
975
Tumor
0.5
921
Tumor
0.5
391
Tumor
0.5
191
Tumor
0.5
983
Tumor
0.5
685
Tumor
0.5
1041
Tumor
0.4
211
Tumor
0.4
343
Tumor
0.4
352
Normal
0.4
861
Tumor
0.4
354
Normal
0.4
867
Tumor
0.4
1031
Tumor
0.4
195
Tumor
0.3
413
Tumor
0.3
113
Tumor
0.3
513
Tumor
0.3
342
Normal
0.3
743
Tumor
0.3
785
Tumor
0.3
213
Tumor
0.3
523
Tumor
0.3
862
Normal
0.3
728
Normal
0.3
222
Normal
0.3
963
Tumor
0.3
873
Tumor
0.3
395
Tumor
0.3
145
Tumor
0.3
297
Tumor
0.3
123
Tumor
0.3
1032
Normal
0.3
568
Normal
0.3
755
Tumor
0.3
786
Normal
0.3
161
Tumor
0.2
471
Tumor
0.2
278
Normal
0.2
727
Tumor
0.2
353
Tumor
0.2
1042
Normal
0.2
695
Tumor
0.2
474
Normal
0.2
383
Tumor
0.2
777
Tumor
0.2
923
Tumor
0.2
141
Tumor
0.2
218
Normal
0.2
1026
Normal
0.2
358
Normal
0.2
572
Normal
0.2
756
Normal
0.2
132
Normal
0.2
426
Normal
0.2
472
Normal
0.2
135
Tumor
0.2
187
Tumor
0.1
478
Normal
0.1
142
Normal
0.1
744
Normal
0.1
714
Normal
0.1
686
Normal
0.1
162
Normal
0.1
185
Tumor
0.1
628
Normal
0.1
1022
Normal
0.1
332
Normal
0.1
311
Tumor
0.1
298
Normal
0.1
361
Tumor
0.1
1021
Tumor
0.1
863
Tumor
0.1
314
Normal
0.1
344
Normal
0.1
186
Normal
0.1
331
Tumor
0.1
618
Normal
0.1
563
Tumor
0.1
1028
Normal
0.1
482
Normal
0.1
571
Tumor
0.1
393
Tumor
0.1
738
Normal
0.1
557
Tumor
0.1
462
Normal
0.1
396
Normal
0.1
814
Normal
0.0
461
Tumor
0.0
721
Tumor
0.0
966
Normal
0.0
746
Normal
0.0
366
Normal
0.0
138
Normal
0.0
427
Tumor
0.0
147
Tumor
0.0
277
Tumor
0.0
368
Normal
0.0
715
Tumor
0.0
516
Normal
0.0
524
Normal
0.0
124
Normal
0.0
376
Normal
0.0
131
Tumor
0.0
127
Tumor
0.0
388
Normal
0.0
172
Normal
0.0
737
Tumor
0.0
312
Normal
0.0
196
Normal
-0.1
192
Normal
-0.1
642
Normal
-0.1
392
Normal
-0.1
1014
Normal
-0.1
696
Normal
-0.1
616
Normal
-0.1
367
Tumor
-0.1
137
Tumor
-0.1
385
Tumor
-0.1
984
Normal
-0.1
813
Tumor
-0.1
1025
Tumor
-0.1
214
Normal
-0.1
1027
Tumor
-0.1
384
Normal
-0.1
286
Normal
-0.1
868
Normal
-0.1
365
Tumor
-0.1
421
Tumor
-0.1
722
Normal
-0.1
558
Normal
-0.1
146
Normal
-0.1
778
Normal
-0.1
723
Tumor
-0.1
515
Tumor
-0.1
125
Tumor
-0.1
517
Tumor
-0.1
617
Tumor
-0.1
362
Normal
-0.2
313
Tumor
-0.2
514
Normal
-0.2
574
Normal
-0.2
148
Normal
-0.2
111
Normal
-0.2
188
Normal
-0.2
112
Tumor
-0.2
864
Normal
-0.2
375
Tumor
-0.2
114
Normal
-0.2
428
Normal
-0.2
228
Normal
-0.2
742
Normal
-0.2
386
Normal
-0.2
716
Normal
-0.2
982
Normal
-0.2
866
Normal
-0.2
227
Tumor
-0.2
424
Normal
-0.2
224
Normal
-0.2
283
Tumor
-0.2
724
Normal
-0.2
394
Normal
-0.3
636
Normal
-0.3
615
Tumor
-0.3
713
Tumor
-0.3
564
Normal
-0.3
136
Normal
-0.3
128
Normal
-0.3
518
Normal
-0.3
284
Normal
-0.3
924
Normal
-0.3
126
Normal
-0.3
212
Normal
-0.3
741
Tumor
-0.4
414
Normal
-0.4
567
Tumor
-0.4
423
Tumor
-0.4
874
Normal
-0.4
525
Tumor
-0.4
526
Normal
-0.4
978
Normal
-0.4
223
Tumor
-0.4
918
Normal
-0.5
745
Tumor
-0.5
627
Tumor
-0.5
285
Tumor
-0.5
976
Normal
-0.5
422
Normal
-0.5
573
Tumor
-0.5
1016
Normal
-0.6
968
Normal
-0.6
964
Normal
-0.6
922
Normal
-0.6
958
Normal
-0.8
916
Normal
-0.9
926
Normal
-1.0
917
Tumor
-1.3
231
Tumor
N/A
232
Normal
N/A
355
Tumor
N/A
356
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
487
Tumor
N/A
488
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
494
Normal
N/A
497
Tumor
N/A
498
Normal
N/A
257
Tumor
N/A
258
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
937
Tumor
N/A
817
Tumor
N/A
938
Normal
N/A
818
Normal
N/A
261
Tumor
N/A
262
Normal
N/A
267
Tumor
N/A
268
Normal
N/A
943
Tumor
N/A
823
Tumor
N/A
944
Normal
N/A
824
Normal
N/A
271
Tumor
N/A
272
Normal
N/A
951
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
955
Tumor
N/A
956
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
851
Tumor
N/A
852
Normal
N/A
857
Tumor
N/A
858
Normal
N/A
1046
Normal
N/A
1045
Tumor
N/A
877
Tumor
N/A
878
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
883
Tumor
N/A
884
Normal
N/A
647
Tumor
N/A
527
Tumor
N/A
648
Normal
N/A
528
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
533
Tumor
N/A
534
Normal
N/A
535
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
416
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
663
Tumor
N/A
664
Normal
N/A
665
Tumor
N/A
545
Tumor
N/A
666
Normal
N/A
546
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
432
Normal
N/A
553
Tumor
N/A
433
Tumor
N/A
554
Normal
N/A
434
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
443
Tumor
N/A
444
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
447
Tumor
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
451
Tumor
N/A
452
Normal
N/A
455
Tumor
N/A
697
Tumor
N/A
456
Normal
N/A
698
Normal
N/A
463
Tumor
N/A
464
Normal
N/A
465
Tumor
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.