HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:65.1 nTPM
HPA Brain:62.7 nTPM
GTEx:65.1 nTPM
FANTOM5:72.8 Scaled Tags Per Million
Pig:36.4 nTPM
Mouse:62.8 nTPM
Allen mouse:2.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019043
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 62.7
Sample id Sample description nTPM
Hippocampus
nTPM: 62.7
1898 Male, age 80, left hemisphere 72.9
2529 Female, age 94, left hemisphere 67.5
1855 Male, age 76, left hemisphere 65.4
1911 Female, age 85, right hemisphere 59.9
2621 Female, age 67, right hemisphere 57.9
2148 Female, age 91, left hemisphere 52.3
Dentate gyrus
nTPM: 58.6
2530 Female, age 94, left hemisphere 68.8
2010 Male, age 76, both hemispheres 61.1
2528 Male, age 74, both hemispheres 59.3
2246 Female, age 85, both hemispheres 58.7
1927 Female, age 91, both hemispheres 55.1
2531 Female, age 67, both hemispheres 48.8
Entorhinal gyrus
nTPM: 53.1
2117 Female, age 91, right hemisphere 62.8
2764 Male, age 80, right hemisphere 59.0
1938 Female, age 85, left hemisphere 58.4
1787 Male, age 76, left hemisphere 53.2
2686 Male, age 75, right hemisphere 42.9
2613 Female, age 94, left hemisphere 42.3
Hippocampus, CA1
nTPM: 62.1
2749 Male, age 80, left hemisphere 73.8
2527 Male, age 74, both hemispheres 60.8
2082 Female, age 91, right hemisphere 59.2
1873 Female, age 85, both hemispheres 58.3
2045 Male, age 76, both hemispheres 58.3
Hippocampus, CA2
nTPM: 60.0
2249 Male, age 74, both hemispheres 66.5
1963 Male, age 80, left hemisphere 65.9
2437 Female, age 94, left hemisphere 58.3
1892 Male, age 76, both hemispheres 58.0
1940 Female, age 85, left hemisphere 58.0
2113 Female, age 91, right hemisphere 53.3
Hippocampus, CA3
nTPM: 58.6
2436 Male, age 74, both hemispheres 71.8
1867 Male, age 76, both hemispheres 63.5
2137 Male, age 80, left hemisphere 62.7
1891 Female, age 85, both hemispheres 57.0
2620 Female, age 94, left hemisphere 50.2
2861 Female, age 67, both hemispheres 46.4
Parahippocampal cortex
nTPM: 52.4
2018 Male, age 76, both hemispheres 61.1
1933 Female, age 85, both hemispheres 60.3
2245 Female, age 91, both hemispheres 54.5
1990 Female, age 91, right hemisphere 53.7
2250 Female, age 67, right hemisphere 52.8
1850 Male, age 80, both hemispheres 51.7
2532 Female, age 72, left hemisphere 51.3
2692 Male, age 74, both hemispheres 49.1
2622 Female, age 67, right hemisphere 47.4
2693 Female, age 94, both hemispheres 41.9
Perirhinal gyrus
nTPM: 56.7
1847 Female, age 91, left hemisphere 65.2
1794 Male, age 80, right hemisphere 60.3
1841 Female, age 85, right hemisphere 60.1
2521 Female, age 94, right hemisphere 53.0
2848 Male, age 76, right hemisphere 44.9
Subiculum
nTPM: 57.2
1977 Female, age 85, both hemispheres 64.4
2042 Male, age 76, both hemispheres 61.6
1901 Male, age 80, both hemispheres 60.2
2729 Female, age 91, right hemisphere 56.1
2619 Male, age 74, both hemispheres 55.2
2438 Female, age 94, left hemisphere 45.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 65.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 65.1
Samples: 197

Max nTPM: 148.2
Min nTPM: 26.7
Std nTPM: 17.2
Median nTPM: 62.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 148.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 127.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 120.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 109.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 108.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 107.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 106.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 106.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 100.8
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 98.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 98.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 72.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.8
FF:10169-103B7 60 years, female 85.1
FF:10153-102I9 76 years, female 60.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 36.4
Pig sample Sample description nTPM
Subiculum
nTPM: 31.8
Samples: 4

Max nTPM: 39.5
Min nTPM: 28.3
Sample A Female 39.5
Sample B Female 30.0
Sample C Male 29.5
Sample D Male 28.3
Dorsal hippocampus
nTPM: 36.4
Samples: 4

Max nTPM: 46.8
Min nTPM: 26.4
Sample A Female 46.8
Sample B Female 30.7
Sample C Male 41.7
Sample D Male 26.4
Entorhinal cortex
nTPM: 31.6
Samples: 4

Max nTPM: 34.0
Min nTPM: 27.6
Sample A Female 31.2
Sample B Female 34.0
Sample C Male 33.5
Sample D Male 27.6
Ventral hippocampus
nTPM: 35.6
Samples: 4

Max nTPM: 46.0
Min nTPM: 22.9
Sample A Female 37.1
Sample B Female 22.9
Sample C Male 46.0
Sample D Male 36.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 62.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.5
Samples: 4

Max nTPM: 63.7
Min nTPM: 55.5
Sample A Male 55.5
Sample B Male 62.3
Sample C Female 60.4
Sample D Female 63.7
Hippocampal formation
nTPM: 62.8
Samples: 4

Max nTPM: 65.0
Min nTPM: 58.6
Sample A Male 63.3
Sample B Male 65.0
Sample C Female 58.6
Sample D Female 64.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.5
69134256 Antisense, RP_050321_02_F03, Mouse strain C57BL/6J (56 days, male) 2.5

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