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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
C1GALT1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
38.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
34.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
33.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
32.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
25.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
25.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
24.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
22.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
22.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
21.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
21.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
21.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
21.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
21.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
20.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
19.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
19.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
19.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
17.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
17.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
17.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
17.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
16.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
16.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
15.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
15.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
15.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
15.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
14.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
14.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
13.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
13.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
13.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
13.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
12.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
12.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
12.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
12.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
12.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
12.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
12.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
11.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
11.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
10.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
10.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
10.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
10.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
10.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
10.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
9.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
9.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
9.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
8.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
8.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
8.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
8.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
7.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
7.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
7.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
7.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
7.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
C1GALT1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
112.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
60.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
49.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
45.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
43.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
42.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
40.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
39.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
39.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
38.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
37.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
36.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
36.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
36.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
36.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
34.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
34.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
33.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
33.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
32.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
32.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
32.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
31.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
31.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
31.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
30.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
30.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
30.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
30.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
30.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
30.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
30.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
30.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
29.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
29.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
29.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
29.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
28.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
28.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
28.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
28.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
28.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
28.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
28.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
28.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
28.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
27.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
27.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
27.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
27.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
27.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
27.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
27.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
27.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
26.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
26.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
26.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
26.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
26.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
26.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
26.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
26.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
25.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
25.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
25.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
25.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
25.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
25.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
25.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
25.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
25.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
25.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
25.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
25.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
24.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
24.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
24.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
24.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
24.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
24.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
24.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
24.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
24.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
24.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
23.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
23.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
23.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
23.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
23.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
23.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
23.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
23.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
23.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
23.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
22.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
22.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
22.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
22.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
22.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
22.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
22.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
22.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
22.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
22.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
22.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
22.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
22.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
22.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
22.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
22.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
21.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
21.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
21.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
21.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
21.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
21.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
21.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
21.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
21.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
21.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
20.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
20.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
20.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
20.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
20.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
20.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
20.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
20.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
20.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
20.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
20.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
20.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
20.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
20.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
20.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
20.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
19.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
19.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
19.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
19.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
19.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
19.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
19.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
19.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
19.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
19.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
19.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
19.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
19.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
19.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
19.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
19.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
19.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
19.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
19.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
19.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
19.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
19.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
19.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
19.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
19.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
19.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
19.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
18.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
18.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
18.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
18.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
18.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
18.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
18.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
18.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
18.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
18.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
18.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
18.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
18.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
18.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
18.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
18.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
18.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
18.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
18.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
18.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
18.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
18.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
18.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
18.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
18.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
18.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
18.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
18.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
18.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
18.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
18.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
18.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
17.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
17.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
17.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
17.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
17.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
17.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
17.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
17.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
17.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
17.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
17.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
17.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
17.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
17.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
17.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
17.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
17.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
17.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
17.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
17.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
17.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
17.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
17.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
17.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
17.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
17.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
17.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
16.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
16.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
16.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
16.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
16.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
16.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
16.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
16.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
16.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
16.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
16.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
16.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
16.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
16.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
16.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
15.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
15.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
15.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
15.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
15.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
15.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
15.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
15.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
15.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
15.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
15.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
15.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
15.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
15.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
15.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
15.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
15.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
15.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
15.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
15.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
15.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
15.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
15.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
15.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
15.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
15.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
15.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
15.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
15.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
15.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
15.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
15.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
15.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
15.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
15.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
14.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
14.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
14.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
14.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
14.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
14.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
14.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
14.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
14.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
14.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
14.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
14.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
14.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
14.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
14.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
14.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
14.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
14.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
14.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
14.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
14.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
14.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
14.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
14.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
14.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
14.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
14.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
14.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
14.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
14.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
14.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
14.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
14.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
14.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
14.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
14.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
14.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
13.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
13.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
13.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
13.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
13.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
13.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
13.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
13.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
13.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
13.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
13.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
13.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
13.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
13.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
13.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
13.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
13.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
13.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
13.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
13.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
13.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
13.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
13.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
13.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
13.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
13.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
13.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
13.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
13.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
13.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
13.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
12.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
12.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
12.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
12.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
12.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
12.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
12.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
12.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
12.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
12.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
12.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
12.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
12.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
12.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
12.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
12.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
12.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
12.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
12.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
12.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
12.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
12.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
12.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
12.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
12.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
12.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
12.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
12.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
12.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
12.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
11.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
11.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
11.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
11.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
11.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
11.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
11.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
11.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
11.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
11.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
11.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
11.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
11.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
11.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
11.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
11.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
11.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
11.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
11.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
11.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
11.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
11.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
11.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
11.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
11.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
11.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
11.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
11.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
11.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
11.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
11.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
11.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
11.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
11.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
11.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
10.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
10.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
10.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
10.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
10.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
10.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
10.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
10.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
10.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
10.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
10.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
10.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
10.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
10.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
10.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
10.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
10.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
10.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
10.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
10.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
10.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
10.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
10.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
10.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
10.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
10.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
10.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
10.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
10.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
10.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
10.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
9.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
9.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
9.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
9.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
9.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
9.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
9.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
9.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
9.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
9.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
9.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
9.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
9.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
8.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
8.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
8.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
8.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
8.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
8.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
8.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
8.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
8.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
8.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
8.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
7.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
7.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
7.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
7.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
7.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
7.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
7.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
7.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
7.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
7.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
7.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
7.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
7.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
6.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
6.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
6.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
6.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
6.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
6.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
6.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
6.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
6.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
5.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
5.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
5.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
5.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
5.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
C1GALT1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
88.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
53.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
53.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
49.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
49.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
49.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
48.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
46.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
45.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
44.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
42.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
41.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
40.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
40.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
40.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
40.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
37.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
37.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
36.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
36.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
35.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
35.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
35.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
34.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
34.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
34.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
34.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
33.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
33.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
32.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
32.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
32.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
32.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
31.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
31.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
31.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
31.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
30.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
30.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
30.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
29.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
29.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
28.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
28.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
28.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
28.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
27.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
27.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
27.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
26.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
26.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
26.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
26.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
25.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
25.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
24.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
24.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
24.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
24.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
23.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
23.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
22.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
21.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
21.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
21.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
21.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
21.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
21.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
21.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
21.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
20.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
20.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
20.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
20.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
20.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
20.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
19.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
18.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
18.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
18.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
18.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
17.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
17.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
16.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
16.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
16.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
16.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
16.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
15.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
15.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
15.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
15.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
13.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
13.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
12.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
12.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
11.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
C1GALT1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
81.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
62.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
52.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
52.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
50.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
48.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
47.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
45.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
42.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
41.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
40.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
39.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
38.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
38.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
37.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
37.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
37.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
36.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
35.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
34.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
34.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
33.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
33.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
33.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
32.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
32.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
32.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
32.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
32.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
32.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
31.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
31.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
30.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
30.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
30.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
29.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
29.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
29.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
28.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
28.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
28.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
28.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
28.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
28.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
27.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
27.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
27.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
26.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
26.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
26.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
26.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
26.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
25.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
25.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
25.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
25.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
25.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
24.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
24.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
24.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
24.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
24.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
24.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
24.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
24.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
23.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
23.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
23.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
23.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
23.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
23.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
23.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
23.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
23.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
23.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
23.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
23.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
23.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
22.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
22.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
22.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
22.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
22.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
22.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
22.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
22.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
21.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
21.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
21.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
21.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
21.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
21.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
21.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
21.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
21.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
21.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
21.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
21.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
21.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
21.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
21.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
21.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
21.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
20.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
20.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
20.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
20.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
20.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
20.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
20.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
19.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
19.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
19.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
19.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
19.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
19.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
19.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
19.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
18.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
18.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
18.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
18.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
18.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
18.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
18.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
18.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
17.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
17.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
17.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
17.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
17.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
17.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
17.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
17.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
16.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
16.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
16.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
16.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
16.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
16.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
16.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
16.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
16.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
16.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
16.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
16.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
16.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
16.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
16.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
16.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
16.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
15.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
15.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
15.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
15.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
15.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
15.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
15.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
15.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
15.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
15.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
15.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
15.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
15.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
15.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
15.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
15.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
15.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
15.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
15.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
14.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
14.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
14.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
14.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
14.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
14.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
14.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
14.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
14.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
14.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
14.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
14.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
14.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
14.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
14.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
14.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
14.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
14.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
14.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
14.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
14.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
14.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
14.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
14.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
14.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
13.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
13.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
13.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
13.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
13.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
13.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
13.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
13.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
13.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
13.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
13.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
13.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
12.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
12.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
12.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
12.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
12.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
12.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
12.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
12.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
12.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
12.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
12.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
12.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
12.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
12.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
12.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
11.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
11.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
11.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
11.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
11.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
11.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
11.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
11.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
11.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
11.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
11.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
11.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
11.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
11.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
10.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
10.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
10.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
10.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
10.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
10.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
9.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
9.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
9.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
9.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
8.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
8.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
8.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
8.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
8.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
8.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
7.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
7.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
7.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
7.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
6.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
6.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
6.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
6.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
6.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
5.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
5.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
5.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
5.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
4.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
4.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
4.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
3.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
3.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
1.3
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002350011
Tumor
1.2
CPT0076330003
Tumor
1.2
CPT0025110003
Tumor
1.0
CPT0078800003
Tumor
1.0
CPT0015730003
Tumor
0.9
CPT0079270003
Tumor
0.7
CPT0011410003
Tumor
0.7
CPT0089020003
Tumor
0.7
CPT0086950003
Tumor
0.6
CPT0015910003
Tumor
0.6
CPT0088710001
Normal
0.6
CPT0086030003
Tumor
0.6
CPT0006730001
Normal
0.6
CPT0078840001
Normal
0.5
CPT0065450001
Normal
0.5
CPT0088780001
Normal
0.4
CPT0088920001
Normal
0.4
CPT0001180009
Tumor
0.4
CPT0063320003
Tumor
0.4
CPT0065430003
Tumor
0.4
CPT0092800003
Normal
0.4
CPT0078660003
Tumor
0.4
CPT0000790001
Normal
0.4
CPT0006950001
Normal
0.4
CPT0023360001
Normal
0.4
CPT0081880003
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0079380003
Tumor
0.3
CPT0001350001
Normal
0.3
CPT0066430001
Normal
0.3
CPT0077310003
Tumor
0.3
CPT0078830003
Tumor
0.3
CPT0092310003
Normal
0.3
CPT0023350003
Tumor
0.3
CPT0065750003
Tumor
0.3
CPT0092740003
Normal
0.3
CPT0002270011
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0014350001
Normal
0.3
CPT0025170003
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0089480003
Normal
0.2
CPT0026420001
Normal
0.2
CPT0015810003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0025060001
Normal
0.2
CPT0065810003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0089040001
Normal
0.2
CPT0000890001
Normal
0.2
CPT0014130001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0087050003
Normal
0.2
CPT0007320003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0081620001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0069160003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0025050003
Tumor
0.1
CPT0078670001
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0088640003
Normal
0.1
CPT0001270001
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0079430001
Normal
0.1
CPT0023710001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0069000003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0014450004
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0081990003
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0007470001
Normal
0.0
CPT0001540009
Tumor
0.0
CPT0010160003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0078510003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0088690003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0066520001
Normal
0.0
CPT0012180003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0017850003
Tumor
0.0
CPT0020120003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0024670003
Tumor
-0.1
CPT0079180003
Tumor
-0.1
CPT0018250001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0078990003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0025290003
Tumor
-0.1
CPT0026410003
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0075560003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0012370003
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0010110003
Tumor
-0.1
CPT0079230003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0009000003
Tumor
-0.2
CPT0012770003
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0000640003
Tumor
-0.3
CPT0012670003
Tumor
-0.3
CPT0077490003
Tumor
-0.3
CPT0025230003
Tumor
-0.3
CPT0088900003
Tumor
-0.3
CPT0079480003
Tumor
-0.3
CPT0064400001
Normal
-0.3
CPT0092730003
Tumor
-0.3
CPT0007870001
Normal
-0.3
CPT0077320001
Normal
-0.3
CPT0086830003
Normal
-0.3
CPT0088630003
Tumor
-0.3
CPT0088550004
Tumor
-0.3
CPT0001230001
Normal
-0.3
CPT0025880003
Tumor
-0.3
CPT0019160001
Normal
-0.3
CPT0001340003
Tumor
-0.3
CPT0010120001
Normal
-0.4
CPT0075720003
Tumor
-0.4
CPT0023690003
Tumor
-0.4
CPT0025350003
Tumor
-0.4
CPT0084590001
Normal
-0.4
CPT0009080003
Normal
-0.4
CPT0025580004
Tumor
-0.4
CPT0012550003
Tumor
-0.4
CPT0014370004
Tumor
-0.4
CPT0088970003
Tumor
-0.4
CPT0065930003
Tumor
-0.4
CPT0009020003
Normal
-0.4
CPT0071150004
Tumor
-0.4
CPT0009060003
Tumor
-0.5
CPT0084560003
Tumor
-0.5
CPT0088760003
Tumor
-0.5
CPT0021240003
Tumor
-0.5
CPT0006900003
Tumor
-0.5
CPT0001550001
Normal
-0.5
CPT0007860003
Tumor
-0.5
CPT0086820003
Tumor
-0.5
CPT0012920003
Normal
-0.5
CPT0082010001
Normal
-0.5
CPT0000780007
Tumor
-0.6
CPT0001190001
Normal
-0.6
CPT0002370001
Normal
-0.6
CPT0014470001
Normal
-0.6
CPT0086890003
Normal
-0.6
CPT0063330001
Normal
-0.6
CPT0079510001
Normal
-0.6
CPT0079300001
Normal
-0.6
CPT0024680001
Normal
-0.6
CPT0086870003
Tumor
-0.7
CPT0000870016
Tumor
-0.8
CPT0012080003
Tumor
-0.8
CPT0066480003
Tumor
-0.8
CPT0012640003
Normal
-0.8
CPT0092190003
Normal
-0.8
CPT0011240003
Tumor
-0.9
CPT0017410003
Tumor
-1.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
