HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:9.5 nTPM
HPA Brain:20.5 nTPM
GTEx:9.5 nTPM
FANTOM5:19.7 Scaled Tags Per Million
Pig:11.3 nTPM
Mouse:9.9 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011294Antibody HPA012819
Glial cells MediumLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 20.5
Sample id Sample description nTPM
Hippocampus
nTPM: 18.0
1898 Male, age 80, left hemisphere 20.2
2529 Female, age 94, left hemisphere 19.2
1855 Male, age 76, left hemisphere 18.8
1911 Female, age 85, right hemisphere 18.3
2621 Female, age 67, right hemisphere 16.7
2148 Female, age 91, left hemisphere 14.6
Dentate gyrus
nTPM: 18.3
2530 Female, age 94, left hemisphere 24.5
2010 Male, age 76, both hemispheres 22.6
2246 Female, age 85, both hemispheres 16.9
2528 Male, age 74, both hemispheres 16.1
1927 Female, age 91, both hemispheres 15.1
2531 Female, age 67, both hemispheres 14.7
Entorhinal gyrus
nTPM: 17.5
1938 Female, age 85, left hemisphere 21.4
2117 Female, age 91, right hemisphere 20.6
2764 Male, age 80, right hemisphere 16.4
2686 Male, age 75, right hemisphere 16.1
1787 Male, age 76, left hemisphere 15.5
2613 Female, age 94, left hemisphere 14.8
Hippocampus, CA1
nTPM: 16.7
2527 Male, age 74, both hemispheres 17.7
2749 Male, age 80, left hemisphere 17.1
1873 Female, age 85, both hemispheres 17.0
2045 Male, age 76, both hemispheres 16.1
2082 Female, age 91, right hemisphere 15.5
Hippocampus, CA2
nTPM: 19.6
2249 Male, age 74, both hemispheres 23.7
1963 Male, age 80, left hemisphere 22.6
2437 Female, age 94, left hemisphere 19.0
1940 Female, age 85, left hemisphere 18.4
1892 Male, age 76, both hemispheres 17.1
2113 Female, age 91, right hemisphere 16.6
Hippocampus, CA3
nTPM: 16.8
2436 Male, age 74, both hemispheres 25.4
1891 Female, age 85, both hemispheres 20.3
1867 Male, age 76, both hemispheres 17.2
2137 Male, age 80, left hemisphere 14.2
2620 Female, age 94, left hemisphere 12.7
2861 Female, age 67, both hemispheres 10.8
Parahippocampal cortex
nTPM: 17.6
1850 Male, age 80, both hemispheres 22.9
2532 Female, age 72, left hemisphere 21.4
2693 Female, age 94, both hemispheres 19.5
2692 Male, age 74, both hemispheres 17.9
2018 Male, age 76, both hemispheres 17.8
1990 Female, age 91, right hemisphere 17.4
1933 Female, age 85, both hemispheres 17.1
2245 Female, age 91, both hemispheres 16.3
2250 Female, age 67, right hemisphere 14.0
2622 Female, age 67, right hemisphere 11.7
Perirhinal gyrus
nTPM: 18.0
1841 Female, age 85, right hemisphere 20.1
1794 Male, age 80, right hemisphere 18.0
2848 Male, age 76, right hemisphere 17.9
2521 Female, age 94, right hemisphere 17.4
1847 Female, age 91, left hemisphere 16.4
Subiculum
nTPM: 20.5
2042 Male, age 76, both hemispheres 26.4
2438 Female, age 94, left hemisphere 23.6
1901 Male, age 80, both hemispheres 22.2
2729 Female, age 91, right hemisphere 17.3
1977 Female, age 85, both hemispheres 17.1
2619 Male, age 74, both hemispheres 16.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 9.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.5
Samples: 197

Max nTPM: 24.7
Min nTPM: 2.6
Std nTPM: 4.6
Median nTPM: 8.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 24.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 24.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 23.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 23.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 22.0
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 20.6
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 20.3
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 19.7
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 19.6
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 19.6
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 18.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 19.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.7
FF:10153-102I9 76 years, female 28.0
FF:10169-103B7 60 years, female 11.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 11.3
Pig sample Sample description nTPM
Subiculum
nTPM: 11.3
Samples: 4

Max nTPM: 12.2
Min nTPM: 10.4
Sample A Female 12.2
Sample B Female 10.8
Sample C Male 10.4
Sample D Male 11.6
Dorsal hippocampus
nTPM: 11.3
Samples: 4

Max nTPM: 12.4
Min nTPM: 9.0
Sample A Female 11.6
Sample B Female 12.2
Sample C Male 12.4
Sample D Male 9.0
Entorhinal cortex
nTPM: 9.9
Samples: 4

Max nTPM: 10.3
Min nTPM: 9.3
Sample A Female 10.1
Sample B Female 10.3
Sample C Male 10.0
Sample D Male 9.3
Ventral hippocampus
nTPM: 11.1
Samples: 4

Max nTPM: 12.5
Min nTPM: 9.7
Sample A Female 11.7
Sample B Female 9.7
Sample C Male 10.6
Sample D Male 12.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 9.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.9
Samples: 4

Max nTPM: 10.6
Min nTPM: 8.6
Sample A Male 9.8
Sample B Male 10.4
Sample C Female 8.6
Sample D Female 10.6
Hippocampal formation
nTPM: 7.4
Samples: 4

Max nTPM: 8.5
Min nTPM: 6.5
Sample A Male 8.5
Sample B Male 7.1
Sample C Female 6.5
Sample D Female 7.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
68743775 Antisense, RP_050203_01_F01, Mouse strain C57BL/6J (56 days, male) 0.4

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